RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 TENM3Q9P273 2699 aa0.74□□□□□ -2.29
MTHFD1-212ENST00000555858 GPR98Q8WXG9 6306 aa0.74□□□□□ -2.29
MTHFD1-212ENST00000555858 FLGP20930 4061 aaPredicted RBP0.73□□□□□ -2.29
MTHFD1-212ENST00000555858 NBEAL2Q6ZNJ1 2754 aa0.73□□□□□ -2.29
MTHFD1-212ENST00000555858 STAB2Q8WWQ8 2551 aa0.73□□□□□ -2.29
MTHFD1-212ENST00000555858 RYR2Q92736 4967 aa0.73□□□□□ -2.29
MTHFD1-212ENST00000555858 DEFB4AO15263 64 aa0.72□□□□□ -2.29
MTHFD1-212ENST00000555858 PRM1P04553 51 aa0.72□□□□□ -2.29
MTHFD1-212ENST00000555858 HYDINQ4G0P3 5121 aa0.72□□□□□ -2.29
MTHFD1-212ENST00000555858 MUC5BQ9HC84 5762 aaPredicted RBP0.71□□□□□ -2.3
MTHFD1-212ENST00000555858 LRP1BQ9NZR2 4599 aa0.71□□□□□ -2.3
MTHFD1-212ENST00000555858 RYR1P21817 5038 aa0.7□□□□□ -2.3
MTHFD1-212ENST00000555858 SMR3BP02814 79 aaPredicted RBP0.7□□□□□ -2.3
MTHFD1-212ENST00000555858 FAT1Q14517 4588 aa0.7□□□□□ -2.3
MTHFD1-212ENST00000555858 EPPK1P58107 5090 aaKnown RBP0.7□□□□□ -2.3
MTHFD1-212ENST00000555858 LRP1Q07954 4544 aaKnown RBP0.69□□□□□ -2.3
MTHFD1-212ENST00000555858 KRTAP19-5Q3LI72 72 aa0.69□□□□□ -2.3
MTHFD1-212ENST00000555858 HERC2O95714 4834 aa0.68□□□□□ -2.3
MTHFD1-212ENST00000555858 MT1AP04731 61 aa0.68□□□□□ -2.3
MTHFD1-212ENST00000555858 LPAP08519 4548 aa0.68□□□□□ -2.3
MTHFD1-212ENST00000555858 BIRC6Q9NR09 4857 aa0.67□□□□□ -2.3
MTHFD1-212ENST00000555858 KRTAP4-1Q9BYQ7 146 aa0.67□□□□□ -2.3
MTHFD1-212ENST00000555858 FCGBPQ9Y6R7 5405 aaPredicted RBP0.67□□□□□ -2.3
MTHFD1-212ENST00000555858 MUC17Q685J3 4493 aa0.66□□□□□ -2.3
MTHFD1-212ENST00000555858 SPRR2BP35325 72 aa0.66□□□□□ -2.3
MTHFD1-212ENST00000555858 PCLOQ9Y6V0 5065 aa0.66□□□□□ -2.3
MTHFD1-212ENST00000555858 ABCA13Q86UQ4 5058 aa0.65□□□□□ -2.3
MTHFD1-212ENST00000555858 SPRR2DP22532 72 aa0.65□□□□□ -2.31
MTHFD1-212ENST00000555858 SPRR2AP35326 72 aa0.65□□□□□ -2.31
MTHFD1-212ENST00000555858 HERC1Q15751 4861 aa0.65□□□□□ -2.31
MTHFD1-212ENST00000555858 KIAA1109Q2LD37 5005 aa0.64□□□□□ -2.31
MTHFD1-212ENST00000555858 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
MTHFD1-212ENST00000555858 KRTAP19-3Q7Z4W3 81 aa0.63□□□□□ -2.31
MTHFD1-212ENST00000555858 HMCN2Q8NDA2 5059 aa0.62□□□□□ -2.31
MTHFD1-212ENST00000555858 SPRR2FQ96RM1 72 aa0.6□□□□□ -2.31
MTHFD1-212ENST00000555858 LRP2P98164 4655 aa0.59□□□□□ -2.31
MTHFD1-212ENST00000555858 SYNE1Q8NF91 8797 aaKnown RBP0.59□□□□□ -2.31
MTHFD1-212ENST00000555858 KRTAP6-2Q3LI66 62 aa0.59□□□□□ -2.31
MTHFD1-212ENST00000555858 SPRR2GQ9BYE4 73 aa0.59□□□□□ -2.31
MTHFD1-212ENST00000555858 MT1EP04732 61 aa0.58□□□□□ -2.32
MTHFD1-212ENST00000555858 SPRR2EP22531 72 aa0.58□□□□□ -2.32
MTHFD1-212ENST00000555858 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
MTHFD1-212ENST00000555858 UBR4Q5T4S7 5183 aa0.57□□□□□ -2.32
MTHFD1-212ENST00000555858 RNF213Q63HN8 5207 aa0.55□□□□□ -2.32
MTHFD1-212ENST00000555858 FAT4Q6V0I7 4981 aa0.55□□□□□ -2.32
MTHFD1-212ENST00000555858 MT1LQ93083 61 aa0.54□□□□□ -2.32
MTHFD1-212ENST00000555858 MT1HP80294 61 aa0.53□□□□□ -2.32
MTHFD1-212ENST00000555858 KRTAP19-8Q3LI54 63 aa0.52□□□□□ -2.33
MTHFD1-212ENST00000555858 MUC2Q02817 5179 aa0.52□□□□□ -2.33
MTHFD1-212ENST00000555858 MACF1Q9UPN3 7388 aaKnown RBP0.51□□□□□ -2.33
MTHFD1-212ENST00000555858 AHNAK2Q8IVF2 5795 aa0.5□□□□□ -2.33
MTHFD1-212ENST00000555858 MT1XP80297 61 aa0.5□□□□□ -2.33
MTHFD1-212ENST00000555858 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
MTHFD1-212ENST00000555858 KRTAP5-10Q6L8G5 202 aa0.49□□□□□ -2.33
MTHFD1-212ENST00000555858 USH2AO75445 5202 aa0.48□□□□□ -2.33
MTHFD1-212ENST00000555858 SSPOA2VEC9 5147 aa0.48□□□□□ -2.33
MTHFD1-212ENST00000555858 MUC5ACP98088 5654 aa0.48□□□□□ -2.33
MTHFD1-212ENST00000555858 MT1HL1P0DM35 61 aa0.46□□□□□ -2.34
MTHFD1-212ENST00000555858 MDN1Q9NU22 5596 aa0.45□□□□□ -2.34
MTHFD1-212ENST00000555858 KRTAP19-2Q3LHN2 52 aa0.45□□□□□ -2.34
MTHFD1-212ENST00000555858 SYNE2Q8WXH0 6885 aaKnown RBP0.45□□□□□ -2.34
MTHFD1-212ENST00000555858 KRTAP19-7Q3SYF9 63 aa0.44□□□□□ -2.34
MTHFD1-212ENST00000555858 FSIP2Q5CZC0 6907 aa0.44□□□□□ -2.34
MTHFD1-212ENST00000555858 MUC12Q9UKN1 5478 aa0.43□□□□□ -2.34
MTHFD1-212ENST00000555858 MT1BP07438 61 aa0.41□□□□□ -2.34
MTHFD1-212ENST00000555858 KMT2DO14686 5537 aa0.41□□□□□ -2.34
MTHFD1-212ENST00000555858 MT2AP02795 61 aa0.39□□□□□ -2.35
MTHFD1-212ENST00000555858 MT1GP13640 62 aa0.39□□□□□ -2.35
MTHFD1-212ENST00000555858 MT1MQ8N339 61 aa0.38□□□□□ -2.35
MTHFD1-212ENST00000555858 MT1FP04733 61 aa0.36□□□□□ -2.35
MTHFD1-212ENST00000555858 KRTAP6-1Q3LI64 71 aa0.36□□□□□ -2.35
MTHFD1-212ENST00000555858 NEBP20929 6669 aa0.35□□□□□ -2.35
MTHFD1-212ENST00000555858 KRTAP19-6Q3LI70 58 aa0.34□□□□□ -2.36
MTHFD1-212ENST00000555858 PHGR1C9JFL3 82 aa0.32□□□□□ -2.36
MTHFD1-212ENST00000555858 DSTQ03001 7570 aaKnown RBP0.31□□□□□ -2.36
MTHFD1-212ENST00000555858 KRTAP20-1Q3LI63 56 aa0.26□□□□□ -2.37
MTHFD1-212ENST00000555858 KRTAP20-2Q3LI61 65 aa0.23□□□□□ -2.37
MTHFD1-212ENST00000555858 MT4P47944 62 aa0.21□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 39.7 ms