RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 SSPOA2VEC9 5147 aa5.99□□□□□ -1.45
RCCD1-204ENST00000555737 KRTAP2-3P0C7H8 128 aa5.98□□□□□ -1.45
RCCD1-204ENST00000555737 KRTAP2-4Q9BYR9 128 aa5.98□□□□□ -1.45
RCCD1-204ENST00000555737 KRTAP2-1Q9BYU5 128 aa5.98□□□□□ -1.45
RCCD1-204ENST00000555737 LCE2AQ5TA79 106 aaPredicted RBP5.96□□□□□ -1.46
RCCD1-204ENST00000555737 MT1EP04732 61 aa5.96□□□□□ -1.46
RCCD1-204ENST00000555737 SYNE1Q8NF91 8797 aaKnown RBP5.92□□□□□ -1.46
RCCD1-204ENST00000555737 MT1GP13640 62 aa5.91□□□□□ -1.46
RCCD1-204ENST00000555737 OBSCNQ5VST9 7968 aa5.82□□□□□ -1.48
RCCD1-204ENST00000555737 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
RCCD1-204ENST00000555737 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
RCCD1-204ENST00000555737 LCE3BQ5TA77 95 aa5.6□□□□□ -1.51
RCCD1-204ENST00000555737 MT1MQ8N339 61 aa5.58□□□□□ -1.52
RCCD1-204ENST00000555737 SYNE2Q8WXH0 6885 aaKnown RBP5.54□□□□□ -1.52
RCCD1-204ENST00000555737 KRTAP19-3Q7Z4W3 81 aa5.52□□□□□ -1.53
RCCD1-204ENST00000555737 SPRR2FQ96RM1 72 aa5.5□□□□□ -1.53
RCCD1-204ENST00000555737 KRTAP19-6Q3LI70 58 aa5.49□□□□□ -1.53
RCCD1-204ENST00000555737 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
RCCD1-204ENST00000555737 MACF1Q9UPN3 7388 aaKnown RBP5.4□□□□□ -1.55
RCCD1-204ENST00000555737 MDN1Q9NU22 5596 aa5.34□□□□□ -1.56
RCCD1-204ENST00000555737 LCE5AQ5TCM9 118 aa5.22□□□□□ -1.57
RCCD1-204ENST00000555737 KRTAP6-1Q3LI64 71 aa5.22□□□□□ -1.57
RCCD1-204ENST00000555737 KRTAP9-7A8MTY7 169 aa5.16□□□□□ -1.58
RCCD1-204ENST00000555737 LCE3DQ9BYE3 92 aa5.14□□□□□ -1.59
RCCD1-204ENST00000555737 KRTAP9-2Q9BYQ4 174 aa5.12□□□□□ -1.59
RCCD1-204ENST00000555737 PRM1P04553 51 aa5.08□□□□□ -1.6
RCCD1-204ENST00000555737 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
RCCD1-204ENST00000555737 MT1AP04731 61 aa4.94□□□□□ -1.62
RCCD1-204ENST00000555737 KRTAP5-5Q701N2 237 aaPredicted RBP4.92□□□□□ -1.62
RCCD1-204ENST00000555737 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
RCCD1-204ENST00000555737 KRTAP6-3Q3LI67 103 aa4.86□□□□□ -1.63
RCCD1-204ENST00000555737 SPRR2EP22531 72 aa4.86□□□□□ -1.63
RCCD1-204ENST00000555737 SPRR2BP35325 72 aa4.86□□□□□ -1.63
RCCD1-204ENST00000555737 SPRR2AP35326 72 aa4.86□□□□□ -1.63
RCCD1-204ENST00000555737 KRTAP6-2Q3LI66 62 aa4.8□□□□□ -1.64
RCCD1-204ENST00000555737 KRTAP2-2Q9BYT5 123 aa4.8□□□□□ -1.64
RCCD1-204ENST00000555737 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
RCCD1-204ENST00000555737 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
RCCD1-204ENST00000555737 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
RCCD1-204ENST00000555737 SPRR2DP22532 72 aa4.6□□□□□ -1.67
RCCD1-204ENST00000555737 KRTAP5-9P26371 169 aa4.5□□□□□ -1.69
RCCD1-204ENST00000555737 MT3P25713 68 aa4.49□□□□□ -1.69
RCCD1-204ENST00000555737 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
RCCD1-204ENST00000555737 MT4P47944 62 aa4.3□□□□□ -1.72
RCCD1-204ENST00000555737 MUC19Q7Z5P9 8384 aa4.24□□□□□ -1.73
RCCD1-204ENST00000555737 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
RCCD1-204ENST00000555737 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.15□□□□□ -1.75
RCCD1-204ENST00000555737 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
RCCD1-204ENST00000555737 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
RCCD1-204ENST00000555737 LCE1BQ5T7P3 118 aa3.98□□□□□ -1.77
RCCD1-204ENST00000555737 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
RCCD1-204ENST00000555737 NEBP20929 6669 aa3.93□□□□□ -1.78
RCCD1-204ENST00000555737 KRTAP4-11Q9BYQ6 195 aa3.92□□□□□ -1.78
RCCD1-204ENST00000555737 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
RCCD1-204ENST00000555737 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.78
RCCD1-204ENST00000555737 LCE4AQ5TA78 99 aa3.74□□□□□ -1.81
RCCD1-204ENST00000555737 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
RCCD1-204ENST00000555737 KRTAP5-10Q6L8G5 202 aa3.6□□□□□ -1.83
RCCD1-204ENST00000555737 KRTAP5-3Q6L8H2 238 aa3.55□□□□□ -1.84
RCCD1-204ENST00000555737 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
RCCD1-204ENST00000555737 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.86
RCCD1-204ENST00000555737 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
RCCD1-204ENST00000555737 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
RCCD1-204ENST00000555737 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
RCCD1-204ENST00000555737 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
RCCD1-204ENST00000555737 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
RCCD1-204ENST00000555737 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
RCCD1-204ENST00000555737 MUC5BQ9HC84 5762 aaPredicted RBP3.2□□□□□ -1.9
RCCD1-204ENST00000555737 AHNAK2Q8IVF2 5795 aa3.09□□□□□ -1.92
RCCD1-204ENST00000555737 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
RCCD1-204ENST00000555737 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
RCCD1-204ENST00000555737 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
RCCD1-204ENST00000555737 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
RCCD1-204ENST00000555737 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
RCCD1-204ENST00000555737 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
RCCD1-204ENST00000555737 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
RCCD1-204ENST00000555737 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
RCCD1-204ENST00000555737 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 967.9 ms