RNA–Protein interactions for RNA: ENST00000555668.5

GPHN-210, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-210ENST00000555668 LRP1BQ9NZR2 4599 aa1.35□□□□□ -2.19
GPHN-210ENST00000555668 SPRR2GQ9BYE4 73 aa1.34□□□□□ -2.19
GPHN-210ENST00000555668 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
GPHN-210ENST00000555668 LPAP08519 4548 aa1.31□□□□□ -2.2
GPHN-210ENST00000555668 FAT1Q14517 4588 aa1.3□□□□□ -2.2
GPHN-210ENST00000555668 KRTAP19-5Q3LI72 72 aa1.3□□□□□ -2.2
GPHN-210ENST00000555668 J3QKU1 62 aa1.26□□□□□ -2.21
GPHN-210ENST00000555668 KRTAP19-2Q3LHN2 52 aa1.26□□□□□ -2.21
GPHN-210ENST00000555668 HERC1Q15751 4861 aa1.26□□□□□ -2.21
GPHN-210ENST00000555668 PRM1P04553 51 aa1.23□□□□□ -2.21
GPHN-210ENST00000555668 KRTAP19-8Q3LI54 63 aa1.23□□□□□ -2.21
GPHN-210ENST00000555668 MUC17Q685J3 4493 aa1.23□□□□□ -2.21
GPHN-210ENST00000555668 MT1XP80297 61 aa1.21□□□□□ -2.22
GPHN-210ENST00000555668 MT1AP04731 61 aa1.2□□□□□ -2.22
GPHN-210ENST00000555668 MT1HL1P0DM35 61 aa1.2□□□□□ -2.22
GPHN-210ENST00000555668 KRTAP4-1Q9BYQ7 146 aa1.17□□□□□ -2.22
GPHN-210ENST00000555668 MT1EP04732 61 aa1.16□□□□□ -2.22
GPHN-210ENST00000555668 CRCT1Q9UGL9 99 aa1.16□□□□□ -2.22
GPHN-210ENST00000555668 DNHD1Q96M86 4753 aa1.15□□□□□ -2.23
GPHN-210ENST00000555668 MT1BP07438 61 aa1.13□□□□□ -2.23
GPHN-210ENST00000555668 MT1LQ93083 61 aa1.13□□□□□ -2.23
GPHN-210ENST00000555668 KRTAP21-3Q3LHN1 58 aa1.12□□□□□ -2.23
GPHN-210ENST00000555668 LRP2P98164 4655 aa1.11□□□□□ -2.23
GPHN-210ENST00000555668 HMCN2Q8NDA2 5059 aa1.08□□□□□ -2.24
GPHN-210ENST00000555668 KRTAP6-2Q3LI66 62 aa1.07□□□□□ -2.24
GPHN-210ENST00000555668 KRTAP19-7Q3SYF9 63 aa1.07□□□□□ -2.24
GPHN-210ENST00000555668 SPRR2FQ96RM1 72 aa1.07□□□□□ -2.24
GPHN-210ENST00000555668 MT2AP02795 61 aa1.06□□□□□ -2.24
GPHN-210ENST00000555668 SPRR2BP35325 72 aa1.06□□□□□ -2.24
GPHN-210ENST00000555668 SPRR2AP35326 72 aa1.06□□□□□ -2.24
GPHN-210ENST00000555668 MT1FP04733 61 aa1.05□□□□□ -2.24
GPHN-210ENST00000555668 SYNE1Q8NF91 8797 aaKnown RBP1.03□□□□□ -2.24
GPHN-210ENST00000555668 SPRR2DP22532 72 aa1.03□□□□□ -2.24
GPHN-210ENST00000555668 MUC2Q02817 5179 aa1.03□□□□□ -2.24
GPHN-210ENST00000555668 KMT2CQ8NEZ4 4911 aaKnown RBP1.03□□□□□ -2.25
GPHN-210ENST00000555668 HYDINQ4G0P3 5121 aa1.02□□□□□ -2.25
GPHN-210ENST00000555668 MT1HP80294 61 aa1.02□□□□□ -2.25
GPHN-210ENST00000555668 FCGBPQ9Y6R7 5405 aaPredicted RBP1□□□□□ -2.25
GPHN-210ENST00000555668 SPRR2EP22531 72 aa1□□□□□ -2.25
GPHN-210ENST00000555668 MT1GP13640 62 aa0.99□□□□□ -2.25
GPHN-210ENST00000555668 RYR3Q15413 4870 aa0.98□□□□□ -2.25
GPHN-210ENST00000555668 RYR2Q92736 4967 aa0.95□□□□□ -2.26
GPHN-210ENST00000555668 RYR1P21817 5038 aa0.94□□□□□ -2.26
GPHN-210ENST00000555668 MT1MQ8N339 61 aa0.94□□□□□ -2.26
GPHN-210ENST00000555668 HERC2O95714 4834 aa0.94□□□□□ -2.26
GPHN-210ENST00000555668 BIRC6Q9NR09 4857 aa0.92□□□□□ -2.26
GPHN-210ENST00000555668 KRTAP19-3Q7Z4W3 81 aa0.92□□□□□ -2.26
GPHN-210ENST00000555668 KRTAP6-1Q3LI64 71 aa0.89□□□□□ -2.27
GPHN-210ENST00000555668 UBR4Q5T4S7 5183 aa0.88□□□□□ -2.27
GPHN-210ENST00000555668 PCLOQ9Y6V0 5065 aa0.87□□□□□ -2.27
GPHN-210ENST00000555668 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
GPHN-210ENST00000555668 ABCA13Q86UQ4 5058 aa0.79□□□□□ -2.28
GPHN-210ENST00000555668 FAT4Q6V0I7 4981 aa0.79□□□□□ -2.28
GPHN-210ENST00000555668 USH2AO75445 5202 aa0.78□□□□□ -2.29
GPHN-210ENST00000555668 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
GPHN-210ENST00000555668 EPPK1P58107 5090 aaKnown RBP0.77□□□□□ -2.29
GPHN-210ENST00000555668 RNF213Q63HN8 5207 aa0.75□□□□□ -2.29
GPHN-210ENST00000555668 SSPOA2VEC9 5147 aa0.73□□□□□ -2.29
GPHN-210ENST00000555668 KIAA1109Q2LD37 5005 aa0.71□□□□□ -2.3
GPHN-210ENST00000555668 KMT2DO14686 5537 aa0.7□□□□□ -2.3
GPHN-210ENST00000555668 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
GPHN-210ENST00000555668 KRTAP19-6Q3LI70 58 aa0.68□□□□□ -2.3
GPHN-210ENST00000555668 AHNAK2Q8IVF2 5795 aa0.66□□□□□ -2.3
GPHN-210ENST00000555668 MDN1Q9NU22 5596 aa0.66□□□□□ -2.3
GPHN-210ENST00000555668 MUC5ACP98088 5654 aa0.63□□□□□ -2.31
GPHN-210ENST00000555668 MUC12Q9UKN1 5478 aa0.51□□□□□ -2.33
GPHN-210ENST00000555668 MUC5BQ9HC84 5762 aaPredicted RBP0.49□□□□□ -2.33
GPHN-210ENST00000555668 AHNAKQ09666 5890 aaKnown RBP0.48□□□□□ -2.33
GPHN-210ENST00000555668 KRTAP20-2Q3LI61 65 aa0.46□□□□□ -2.34
GPHN-210ENST00000555668 DSTQ03001 7570 aaKnown RBP0.46□□□□□ -2.34
GPHN-210ENST00000555668 SYNE2Q8WXH0 6885 aaKnown RBP0.38□□□□□ -2.35
GPHN-210ENST00000555668 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
GPHN-210ENST00000555668 KRTAP20-1Q3LI63 56 aa0.37□□□□□ -2.35
GPHN-210ENST00000555668 MT4P47944 62 aa0.36□□□□□ -2.35
GPHN-210ENST00000555668 GPR98Q8WXG9 6306 aa0.36□□□□□ -2.35
GPHN-210ENST00000555668 FSIP2Q5CZC0 6907 aa0.31□□□□□ -2.36
GPHN-210ENST00000555668 NEBP20929 6669 aa0.24□□□□□ -2.37
GPHN-210ENST00000555668 MACF1Q9UPN3 7388 aaKnown RBP0.23□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 7.4 ms