RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 FAT1Q14517 4588 aa1.86□□□□□ -2.11
SEC23A-209ENST00000555363 HSPG2P98160 4391 aa1.85□□□□□ -2.11
SEC23A-209ENST00000555363 TNP1P09430 55 aa1.85□□□□□ -2.11
SEC23A-209ENST00000555363 TNXBP22105 4242 aa1.84□□□□□ -2.11
SEC23A-209ENST00000555363 KRTAP19-2Q3LHN2 52 aa1.84□□□□□ -2.11
SEC23A-209ENST00000555363 KIAA1109Q2LD37 5005 aa1.83□□□□□ -2.12
SEC23A-209ENST00000555363 FAT3Q8TDW7 4589 aa1.83□□□□□ -2.12
SEC23A-209ENST00000555363 RYR3Q15413 4870 aa1.82□□□□□ -2.12
SEC23A-209ENST00000555363 SPRR2GQ9BYE4 73 aa1.82□□□□□ -2.12
SEC23A-209ENST00000555363 LRP1Q07954 4544 aaKnown RBP1.82□□□□□ -2.12
SEC23A-209ENST00000555363 MT1HP80294 61 aa1.78□□□□□ -2.12
SEC23A-209ENST00000555363 MYCBP2O75592 4640 aa1.77□□□□□ -2.13
SEC23A-209ENST00000555363 KRTAP19-8Q3LI54 63 aa1.75□□□□□ -2.13
SEC23A-209ENST00000555363 C10orf95Q9H7T3 257 aa1.75□□□□□ -2.13
SEC23A-209ENST00000555363 BIRC6Q9NR09 4857 aa1.74□□□□□ -2.13
SEC23A-209ENST00000555363 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
SEC23A-209ENST00000555363 LRP2P98164 4655 aa1.73□□□□□ -2.13
SEC23A-209ENST00000555363 EPPK1P58107 5090 aaKnown RBP1.73□□□□□ -2.13
SEC23A-209ENST00000555363 HERC2O95714 4834 aa1.71□□□□□ -2.13
SEC23A-209ENST00000555363 MT2AP02795 61 aa1.71□□□□□ -2.14
SEC23A-209ENST00000555363 MUC17Q685J3 4493 aa1.68□□□□□ -2.14
SEC23A-209ENST00000555363 MT1FP04733 61 aa1.68□□□□□ -2.14
SEC23A-209ENST00000555363 ABCA13Q86UQ4 5058 aa1.68□□□□□ -2.14
SEC23A-209ENST00000555363 LPAP08519 4548 aa1.66□□□□□ -2.14
SEC23A-209ENST00000555363 KRTAP8-1Q8IUC2 63 aa1.65□□□□□ -2.15
SEC23A-209ENST00000555363 FLGP20930 4061 aaPredicted RBP1.64□□□□□ -2.15
SEC23A-209ENST00000555363 MT1BP07438 61 aa1.63□□□□□ -2.15
SEC23A-209ENST00000555363 HERC1Q15751 4861 aa1.61□□□□□ -2.15
SEC23A-209ENST00000555363 MT1XP80297 61 aa1.6□□□□□ -2.15
SEC23A-209ENST00000555363 HMCN2Q8NDA2 5059 aa1.58□□□□□ -2.16
SEC23A-209ENST00000555363 PCLOQ9Y6V0 5065 aa1.58□□□□□ -2.16
SEC23A-209ENST00000555363 MUC2Q02817 5179 aa1.53□□□□□ -2.16
SEC23A-209ENST00000555363 KRTAP19-6Q3LI70 58 aa1.53□□□□□ -2.16
SEC23A-209ENST00000555363 FAT4Q6V0I7 4981 aa1.47□□□□□ -2.17
SEC23A-209ENST00000555363 UBR4Q5T4S7 5183 aa1.47□□□□□ -2.17
SEC23A-209ENST00000555363 KRTAP19-5Q3LI72 72 aa1.46□□□□□ -2.18
SEC23A-209ENST00000555363 RNF213Q63HN8 5207 aa1.46□□□□□ -2.18
SEC23A-209ENST00000555363 MT1GP13640 62 aa1.44□□□□□ -2.18
SEC23A-209ENST00000555363 MT1EP04732 61 aa1.42□□□□□ -2.18
SEC23A-209ENST00000555363 KRTAP19-7Q3SYF9 63 aa1.42□□□□□ -2.18
SEC23A-209ENST00000555363 MT1LQ93083 61 aa1.42□□□□□ -2.18
SEC23A-209ENST00000555363 KRTAP19-3Q7Z4W3 81 aa1.4□□□□□ -2.19
SEC23A-209ENST00000555363 SPRR2FQ96RM1 72 aa1.34□□□□□ -2.19
SEC23A-209ENST00000555363 KRTAP2-3P0C7H8 128 aa1.33□□□□□ -2.2
SEC23A-209ENST00000555363 MT1MQ8N339 61 aa1.33□□□□□ -2.2
SEC23A-209ENST00000555363 KRTAP2-4Q9BYR9 128 aa1.33□□□□□ -2.2
SEC23A-209ENST00000555363 KRTAP2-1Q9BYU5 128 aa1.33□□□□□ -2.2
SEC23A-209ENST00000555363 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
SEC23A-209ENST00000555363 USH2AO75445 5202 aa1.26□□□□□ -2.21
SEC23A-209ENST00000555363 MT1AP04731 61 aa1.26□□□□□ -2.21
SEC23A-209ENST00000555363 SSPOA2VEC9 5147 aa1.25□□□□□ -2.21
SEC23A-209ENST00000555363 SPRR2EP22531 72 aa1.25□□□□□ -2.21
SEC23A-209ENST00000555363 SPRR2BP35325 72 aa1.25□□□□□ -2.21
SEC23A-209ENST00000555363 SPRR2AP35326 72 aa1.25□□□□□ -2.21
SEC23A-209ENST00000555363 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
SEC23A-209ENST00000555363 SPRR2DP22532 72 aa1.22□□□□□ -2.21
SEC23A-209ENST00000555363 KRTAP6-1Q3LI64 71 aa1.14□□□□□ -2.23
SEC23A-209ENST00000555363 KMT2DO14686 5537 aa1.13□□□□□ -2.23
SEC23A-209ENST00000555363 FSIP2Q5CZC0 6907 aa1.09□□□□□ -2.23
SEC23A-209ENST00000555363 KRTAP20-1Q3LI63 56 aa1.07□□□□□ -2.24
SEC23A-209ENST00000555363 KRTAP6-2Q3LI66 62 aa1.04□□□□□ -2.24
SEC23A-209ENST00000555363 MUC12Q9UKN1 5478 aa1.03□□□□□ -2.24
SEC23A-209ENST00000555363 KRTAP20-2Q3LI61 65 aa1.03□□□□□ -2.24
SEC23A-209ENST00000555363 MACF1Q9UPN3 7388 aaKnown RBP1.02□□□□□ -2.25
SEC23A-209ENST00000555363 DSTQ03001 7570 aaKnown RBP1□□□□□ -2.25
SEC23A-209ENST00000555363 MT4P47944 62 aa0.99□□□□□ -2.25
SEC23A-209ENST00000555363 PRM1P04553 51 aa0.97□□□□□ -2.25
SEC23A-209ENST00000555363 SYNE1Q8NF91 8797 aaKnown RBP0.96□□□□□ -2.25
SEC23A-209ENST00000555363 MDN1Q9NU22 5596 aa0.96□□□□□ -2.26
SEC23A-209ENST00000555363 AHNAK2Q8IVF2 5795 aa0.94□□□□□ -2.26
SEC23A-209ENST00000555363 SYNE2Q8WXH0 6885 aaKnown RBP0.93□□□□□ -2.26
SEC23A-209ENST00000555363 GPR98Q8WXG9 6306 aa0.85□□□□□ -2.27
SEC23A-209ENST00000555363 NEBP20929 6669 aa0.83□□□□□ -2.28
SEC23A-209ENST00000555363 MUC5BQ9HC84 5762 aaPredicted RBP0.78□□□□□ -2.28
SEC23A-209ENST00000555363 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
SEC23A-209ENST00000555363 AHNAKQ09666 5890 aaKnown RBP0.73□□□□□ -2.29
SEC23A-209ENST00000555363 MUC5ACP98088 5654 aa0.68□□□□□ -2.3
SEC23A-209ENST00000555363 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms