RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 MT4P47944 62 aa1.85□□□□□ -2.11
ATXN3-229ENST00000554672 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
ATXN3-229ENST00000554672 SERP2Q8N6R1 65 aa1.85□□□□□ -2.11
ATXN3-229ENST00000554672 TRAV7A0A075B6U4 112 aa1.84□□□□□ -2.11
ATXN3-229ENST00000554672 H0Y9P7 68 aa1.84□□□□□ -2.11
ATXN3-229ENST00000554672 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
ATXN3-229ENST00000554672 C20orf197Q8N268 126 aa1.83□□□□□ -2.12
ATXN3-229ENST00000554672 CYSTM1Q9H1C7 97 aa1.83□□□□□ -2.12
ATXN3-229ENST00000554672 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
ATXN3-229ENST00000554672 M0QZ58 72 aa1.82□□□□□ -2.12
ATXN3-229ENST00000554672 KRTAP19-3Q7Z4W3 81 aa1.82□□□□□ -2.12
ATXN3-229ENST00000554672 SMIM20Q8N5G0 67 aa1.82□□□□□ -2.12
ATXN3-229ENST00000554672 SNURFQ9Y675 71 aa1.82□□□□□ -2.12
ATXN3-229ENST00000554672 MP68P56378 58 aa1.81□□□□□ -2.12
ATXN3-229ENST00000554672 LINC01554Q52M75 96 aa1.81□□□□□ -2.12
ATXN3-229ENST00000554672 DMAC1Q96GE9 116 aa1.81□□□□□ -2.12
ATXN3-229ENST00000554672 LINC00208Q96KT6 92 aa1.81□□□□□ -2.12
ATXN3-229ENST00000554672 P0C880 135 aa1.79□□□□□ -2.12
ATXN3-229ENST00000554672 KRTAP19-7Q3SYF9 63 aa1.79□□□□□ -2.12
ATXN3-229ENST00000554672 SPRR5A0A1B0GTR4 108 aa1.78□□□□□ -2.12
ATXN3-229ENST00000554672 H7BZZ5 65 aa1.78□□□□□ -2.12
ATXN3-229ENST00000554672 MT1EP04732 61 aa1.78□□□□□ -2.12
ATXN3-229ENST00000554672 MT1GP13640 62 aa1.77□□□□□ -2.13
ATXN3-229ENST00000554672 TMEM258P61165 79 aa1.75□□□□□ -2.13
ATXN3-229ENST00000554672 ACYP2P14621 99 aa1.74□□□□□ -2.13
ATXN3-229ENST00000554672 SPANXA2-OT1Q8N9U9 137 aa1.73□□□□□ -2.13
ATXN3-229ENST00000554672 ATP5EP56381 51 aaPredicted RBP1.71□□□□□ -2.14
ATXN3-229ENST00000554672 MT1MQ8N339 61 aa1.71□□□□□ -2.14
ATXN3-229ENST00000554672 SPTSSBQ8NFR3 76 aa1.71□□□□□ -2.14
ATXN3-229ENST00000554672 SERP1Q9Y6X1 66 aa1.71□□□□□ -2.14
ATXN3-229ENST00000554672 RPS28P62857 69 aaKnown RBP1.7□□□□□ -2.14
ATXN3-229ENST00000554672 KRTAP19-5Q3LI72 72 aa1.69□□□□□ -2.14
ATXN3-229ENST00000554672 COA5Q86WW8 74 aa1.69□□□□□ -2.14
ATXN3-229ENST00000554672 SMIM26A0A096LP01 95 aa1.68□□□□□ -2.14
ATXN3-229ENST00000554672 KRTAP20-2Q3LI61 65 aa1.68□□□□□ -2.14
ATXN3-229ENST00000554672 A0A0D9SG42 100 aa1.66□□□□□ -2.14
ATXN3-229ENST00000554672 KRTAP13-4Q3LI77 160 aa1.66□□□□□ -2.14
ATXN3-229ENST00000554672 MT1LQ93083 61 aa1.66□□□□□ -2.14
ATXN3-229ENST00000554672 CHKB-CPT1BH3BT56 60 aa1.65□□□□□ -2.15
ATXN3-229ENST00000554672 KRTAP12-4P60329 112 aa1.64□□□□□ -2.15
ATXN3-229ENST00000554672 PSPHP1O15172 72 aa1.63□□□□□ -2.15
ATXN3-229ENST00000554672 Q1T7F1 81 aa1.63□□□□□ -2.15
ATXN3-229ENST00000554672 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
ATXN3-229ENST00000554672 PRR15LQ9BU68 103 aa1.62□□□□□ -2.15
ATXN3-229ENST00000554672 LINC01558Q9Y6Z2 57 aa1.62□□□□□ -2.15
ATXN3-229ENST00000554672 V9GYY9 64 aa1.6□□□□□ -2.15
ATXN3-229ENST00000554672 A0A1B0GU69 56 aa1.59□□□□□ -2.15
ATXN3-229ENST00000554672 KRTAP12-1P59990 96 aa1.58□□□□□ -2.16
ATXN3-229ENST00000554672 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
ATXN3-229ENST00000554672 A0A1B0GU33 70 aa1.57□□□□□ -2.16
ATXN3-229ENST00000554672 A6NED7 52 aa1.57□□□□□ -2.16
ATXN3-229ENST00000554672 LUZP6Q538Z0 58 aa1.56□□□□□ -2.16
ATXN3-229ENST00000554672 BRK1Q8WUW1 75 aa1.56□□□□□ -2.16
ATXN3-229ENST00000554672 C10orf95Q9H7T3 257 aa1.56□□□□□ -2.16
ATXN3-229ENST00000554672 MUC5ACP98088 5654 aa1.56□□□□□ -2.16
ATXN3-229ENST00000554672 SPATA8Q6RVD6 105 aa1.55□□□□□ -2.16
ATXN3-229ENST00000554672 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
ATXN3-229ENST00000554672 UQCR11O14957 56 aa1.53□□□□□ -2.16
ATXN3-229ENST00000554672 MIR22HGQ0VDD5 57 aa1.53□□□□□ -2.16
ATXN3-229ENST00000554672 CDC42SE1Q9NRR8 79 aa1.53□□□□□ -2.16
ATXN3-229ENST00000554672 SYNE1Q8NF91 8797 aaKnown RBP1.53□□□□□ -2.16
ATXN3-229ENST00000554672 SPINT4Q6UDR6 99 aa1.52□□□□□ -2.17
ATXN3-229ENST00000554672 PRO0628Q9UI54 55 aa1.51□□□□□ -2.17
ATXN3-229ENST00000554672 TNP1P09430 55 aa1.49□□□□□ -2.17
ATXN3-229ENST00000554672 KRTAP12-3P60328 96 aa1.48□□□□□ -2.17
ATXN3-229ENST00000554672 PMAIP1Q13794 54 aa1.47□□□□□ -2.17
ATXN3-229ENST00000554672 K7ERS5 55 aa1.43□□□□□ -2.18
ATXN3-229ENST00000554672 KRTAP25-1Q3LHN0 102 aa1.43□□□□□ -2.18
ATXN3-229ENST00000554672 MT1AP04731 61 aa1.42□□□□□ -2.18
ATXN3-229ENST00000554672 KRTAP6-1Q3LI64 71 aa1.41□□□□□ -2.18
ATXN3-229ENST00000554672 ROMO1P60602 79 aa1.4□□□□□ -2.19
ATXN3-229ENST00000554672 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
ATXN3-229ENST00000554672 KTN1-AS1Q86SY8 53 aa1.39□□□□□ -2.19
ATXN3-229ENST00000554672 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
ATXN3-229ENST00000554672 INE1O15225 51 aa0.88□□□□□ -2.27
ATXN3-229ENST00000554672 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
ATXN3-229ENST00000554672 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
ATXN3-229ENST00000554672 PRM1P04553 51 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 122.4 ms