RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 INE1O15225 51 aa4.07□□□□□ -1.76
LRP1-207ENST00000554174 KRTAP2-3P0C7H8 128 aa4.06□□□□□ -1.76
LRP1-207ENST00000554174 KRTAP2-4Q9BYR9 128 aa4.06□□□□□ -1.76
LRP1-207ENST00000554174 KRTAP2-1Q9BYU5 128 aa4.06□□□□□ -1.76
LRP1-207ENST00000554174 LOC100996750A0A140TA64 210 aa4.04□□□□□ -1.76
LRP1-207ENST00000554174 KRTAP19-3Q7Z4W3 81 aa4.04□□□□□ -1.76
LRP1-207ENST00000554174 MT1MQ8N339 61 aa4.02□□□□□ -1.77
LRP1-207ENST00000554174 MT1GP13640 62 aa4□□□□□ -1.77
LRP1-207ENST00000554174 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
LRP1-207ENST00000554174 SPRR2FQ96RM1 72 aa3.96□□□□□ -1.78
LRP1-207ENST00000554174 KRTAP9-6A0A140TA67 174 aa3.95□□□□□ -1.78
LRP1-207ENST00000554174 KRTAP9-7A8MTY7 169 aa3.95□□□□□ -1.78
LRP1-207ENST00000554174 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
LRP1-207ENST00000554174 LCE5AQ5TCM9 118 aa3.93□□□□□ -1.78
LRP1-207ENST00000554174 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
LRP1-207ENST00000554174 CRCT1Q9UGL9 99 aa3.9□□□□□ -1.79
LRP1-207ENST00000554174 KRTAP9-2Q9BYQ4 174 aa3.87□□□□□ -1.79
LRP1-207ENST00000554174 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
LRP1-207ENST00000554174 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
LRP1-207ENST00000554174 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.79
LRP1-207ENST00000554174 KRTAP4-6Q9BYQ5 205 aa3.82□□□□□ -1.8
LRP1-207ENST00000554174 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
LRP1-207ENST00000554174 MDN1Q9NU22 5596 aa3.8□□□□□ -1.8
LRP1-207ENST00000554174 KRTAP5-9P26371 169 aa3.73□□□□□ -1.81
LRP1-207ENST00000554174 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
LRP1-207ENST00000554174 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.7□□□□□ -1.82
LRP1-207ENST00000554174 LCE3BQ5TA77 95 aa3.65□□□□□ -1.82
LRP1-207ENST00000554174 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
LRP1-207ENST00000554174 SPRR2EP22531 72 aa3.63□□□□□ -1.83
LRP1-207ENST00000554174 SPRR2BP35325 72 aa3.63□□□□□ -1.83
LRP1-207ENST00000554174 SPRR2AP35326 72 aa3.63□□□□□ -1.83
LRP1-207ENST00000554174 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.84
LRP1-207ENST00000554174 KRTAP4-9Q9BYQ8 210 aa3.58□□□□□ -1.84
LRP1-207ENST00000554174 MT1AP04731 61 aa3.58□□□□□ -1.84
LRP1-207ENST00000554174 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
LRP1-207ENST00000554174 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
LRP1-207ENST00000554174 SPRR2DP22532 72 aa3.48□□□□□ -1.85
LRP1-207ENST00000554174 KRTAP6-3Q3LI67 103 aa3.45□□□□□ -1.86
LRP1-207ENST00000554174 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
LRP1-207ENST00000554174 LCE1DQ5T752 114 aa3.34□□□□□ -1.88
LRP1-207ENST00000554174 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
LRP1-207ENST00000554174 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
LRP1-207ENST00000554174 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
LRP1-207ENST00000554174 MT3P25713 68 aa3.21□□□□□ -1.9
LRP1-207ENST00000554174 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
LRP1-207ENST00000554174 NEBP20929 6669 aa3.19□□□□□ -1.9
LRP1-207ENST00000554174 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
LRP1-207ENST00000554174 PRM1P04553 51 aa3.13□□□□□ -1.91
LRP1-207ENST00000554174 MT4P47944 62 aa3.09□□□□□ -1.91
LRP1-207ENST00000554174 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
LRP1-207ENST00000554174 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
LRP1-207ENST00000554174 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
LRP1-207ENST00000554174 KRTAP2-2Q9BYT5 123 aa2.98□□□□□ -1.93
LRP1-207ENST00000554174 KRTAP20-1Q3LI63 56 aa2.97□□□□□ -1.93
LRP1-207ENST00000554174 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
LRP1-207ENST00000554174 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
LRP1-207ENST00000554174 KRTAP5-3Q6L8H2 238 aa2.88□□□□□ -1.95
LRP1-207ENST00000554174 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
LRP1-207ENST00000554174 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
LRP1-207ENST00000554174 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
LRP1-207ENST00000554174 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
LRP1-207ENST00000554174 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
LRP1-207ENST00000554174 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
LRP1-207ENST00000554174 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
LRP1-207ENST00000554174 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
LRP1-207ENST00000554174 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
LRP1-207ENST00000554174 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
LRP1-207ENST00000554174 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
LRP1-207ENST00000554174 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
LRP1-207ENST00000554174 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
LRP1-207ENST00000554174 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
LRP1-207ENST00000554174 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
LRP1-207ENST00000554174 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
LRP1-207ENST00000554174 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
LRP1-207ENST00000554174 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
LRP1-207ENST00000554174 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
LRP1-207ENST00000554174 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 117 ms