RNA–Protein interactions for RNA: ENST00000553615.5

FCF1-203, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3 BASIC

Gene FCF1, Length 954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-203ENST00000553615 SPRR2GQ9BYE4 73 aa2.62□□□□□ -1.99
FCF1-203ENST00000553615 KRTAP2-3P0C7H8 128 aa2.61□□□□□ -1.99
FCF1-203ENST00000553615 KRTAP2-4Q9BYR9 128 aa2.61□□□□□ -1.99
FCF1-203ENST00000553615 KRTAP2-1Q9BYU5 128 aa2.61□□□□□ -1.99
FCF1-203ENST00000553615 MT1HL1P0DM35 61 aa2.58□□□□□ -2
FCF1-203ENST00000553615 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
FCF1-203ENST00000553615 M0R2T5 61 aa2.56□□□□□ -2
FCF1-203ENST00000553615 KRTAP19-2Q3LHN2 52 aa2.56□□□□□ -2
FCF1-203ENST00000553615 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
FCF1-203ENST00000553615 RYR2Q92736 4967 aa2.54□□□□□ -2
FCF1-203ENST00000553615 HERC1Q15751 4861 aa2.53□□□□□ -2
FCF1-203ENST00000553615 HERC2O95714 4834 aa2.52□□□□□ -2.01
FCF1-203ENST00000553615 ABCA13Q86UQ4 5058 aa2.48□□□□□ -2.01
FCF1-203ENST00000553615 LPAP08519 4548 aa2.47□□□□□ -2.01
FCF1-203ENST00000553615 MUC17Q685J3 4493 aa2.47□□□□□ -2.01
FCF1-203ENST00000553615 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
FCF1-203ENST00000553615 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
FCF1-203ENST00000553615 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
FCF1-203ENST00000553615 KRTAP19-8Q3LI54 63 aa2.43□□□□□ -2.02
FCF1-203ENST00000553615 KRTAP4-1Q9BYQ7 146 aa2.43□□□□□ -2.02
FCF1-203ENST00000553615 CRCT1Q9UGL9 99 aa2.43□□□□□ -2.02
FCF1-203ENST00000553615 FSIP2Q5CZC0 6907 aa2.42□□□□□ -2.02
FCF1-203ENST00000553615 LRP2P98164 4655 aa2.42□□□□□ -2.02
FCF1-203ENST00000553615 KRTAP19-5Q3LI72 72 aa2.38□□□□□ -2.03
FCF1-203ENST00000553615 MT1XP80297 61 aa2.37□□□□□ -2.03
FCF1-203ENST00000553615 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
FCF1-203ENST00000553615 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
FCF1-203ENST00000553615 FAT4Q6V0I7 4981 aa2.32□□□□□ -2.04
FCF1-203ENST00000553615 NEBP20929 6669 aa2.3□□□□□ -2.04
FCF1-203ENST00000553615 MT1BP07438 61 aa2.27□□□□□ -2.05
FCF1-203ENST00000553615 KRTAP6-3Q3LI67 103 aa2.26□□□□□ -2.05
FCF1-203ENST00000553615 MT2AP02795 61 aa2.21□□□□□ -2.06
FCF1-203ENST00000553615 HMCN2Q8NDA2 5059 aa2.2□□□□□ -2.06
FCF1-203ENST00000553615 MT1FP04733 61 aa2.2□□□□□ -2.06
FCF1-203ENST00000553615 SYNE2Q8WXH0 6885 aaKnown RBP2.2□□□□□ -2.06
FCF1-203ENST00000553615 SSPOA2VEC9 5147 aa2.2□□□□□ -2.06
FCF1-203ENST00000553615 RNF213Q63HN8 5207 aa2.19□□□□□ -2.06
FCF1-203ENST00000553615 MT1EP04732 61 aa2.17□□□□□ -2.06
FCF1-203ENST00000553615 KRTAP20-1Q3LI63 56 aa2.17□□□□□ -2.06
FCF1-203ENST00000553615 MACF1Q9UPN3 7388 aaKnown RBP2.17□□□□□ -2.06
FCF1-203ENST00000553615 MT1AP04731 61 aa2.15□□□□□ -2.07
FCF1-203ENST00000553615 MT1LQ93083 61 aa2.14□□□□□ -2.07
FCF1-203ENST00000553615 PRM1P04553 51 aa2.12□□□□□ -2.07
FCF1-203ENST00000553615 MT1HP80294 61 aa2.1□□□□□ -2.07
FCF1-203ENST00000553615 KRTAP19-7Q3SYF9 63 aa2.1□□□□□ -2.07
FCF1-203ENST00000553615 AHNAK2Q8IVF2 5795 aa2.09□□□□□ -2.08
FCF1-203ENST00000553615 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
FCF1-203ENST00000553615 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
FCF1-203ENST00000553615 SPRR2FQ96RM1 72 aa1.95□□□□□ -2.1
FCF1-203ENST00000553615 MT1GP13640 62 aa1.91□□□□□ -2.1
FCF1-203ENST00000553615 KMT2DO14686 5537 aa1.91□□□□□ -2.1
FCF1-203ENST00000553615 SPRR2AP35326 72 aa1.9□□□□□ -2.11
FCF1-203ENST00000553615 KRTAP6-2Q3LI66 62 aa1.9□□□□□ -2.11
FCF1-203ENST00000553615 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
FCF1-203ENST00000553615 HMCN1Q96RW7 5635 aa1.88□□□□□ -2.11
FCF1-203ENST00000553615 MT1MQ8N339 61 aa1.88□□□□□ -2.11
FCF1-203ENST00000553615 SYNE1Q8NF91 8797 aaKnown RBP1.85□□□□□ -2.11
FCF1-203ENST00000553615 SPRR2BP35325 72 aa1.85□□□□□ -2.11
FCF1-203ENST00000553615 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
FCF1-203ENST00000553615 KRTAP19-3Q7Z4W3 81 aa1.84□□□□□ -2.11
FCF1-203ENST00000553615 SPRR2EP22531 72 aa1.8□□□□□ -2.12
FCF1-203ENST00000553615 FCGBPQ9Y6R7 5405 aaPredicted RBP1.79□□□□□ -2.12
FCF1-203ENST00000553615 USH2AO75445 5202 aa1.79□□□□□ -2.12
FCF1-203ENST00000553615 SPRR2DP22532 72 aa1.79□□□□□ -2.12
FCF1-203ENST00000553615 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
FCF1-203ENST00000553615 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
FCF1-203ENST00000553615 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
FCF1-203ENST00000553615 MUC12Q9UKN1 5478 aa1.74□□□□□ -2.13
FCF1-203ENST00000553615 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
FCF1-203ENST00000553615 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
FCF1-203ENST00000553615 MDN1Q9NU22 5596 aa1.63□□□□□ -2.15
FCF1-203ENST00000553615 KRTAP19-6Q3LI70 58 aa1.59□□□□□ -2.15
FCF1-203ENST00000553615 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
FCF1-203ENST00000553615 MT4P47944 62 aa1.13□□□□□ -2.23
FCF1-203ENST00000553615 KRTAP20-2Q3LI61 65 aa1.09□□□□□ -2.23
FCF1-203ENST00000553615 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
FCF1-203ENST00000553615 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 94.1 ms