RNA–Protein interactions for RNA: ENST00000552864.5

LIN7A-204, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7A, Length 6,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-204ENST00000552864 KRTAP9-7A8MTY7 169 aa2.44□□□□□ -2.02
LIN7A-204ENST00000552864 HMCN2Q8NDA2 5059 aa2.43□□□□□ -2.02
LIN7A-204ENST00000552864 KRTAP6-3Q3LI67 103 aa2.42□□□□□ -2.02
LIN7A-204ENST00000552864 MT1MQ8N339 61 aa2.4□□□□□ -2.02
LIN7A-204ENST00000552864 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
LIN7A-204ENST00000552864 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.37□□□□□ -2.03
LIN7A-204ENST00000552864 LCE1AQ5T7P2 110 aa2.35□□□□□ -2.03
LIN7A-204ENST00000552864 MT4P47944 62 aa2.35□□□□□ -2.03
LIN7A-204ENST00000552864 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
LIN7A-204ENST00000552864 KRTAP2-4Q9BYR9 128 aa2.33□□□□□ -2.04
LIN7A-204ENST00000552864 KRTAP4-7Q9BYR0 210 aa2.32□□□□□ -2.04
LIN7A-204ENST00000552864 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
LIN7A-204ENST00000552864 MT3P25713 68 aa2.31□□□□□ -2.04
LIN7A-204ENST00000552864 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
LIN7A-204ENST00000552864 KRTAP19-7Q3SYF9 63 aa2.29□□□□□ -2.04
LIN7A-204ENST00000552864 FSIP2Q5CZC0 6907 aa2.29□□□□□ -2.04
LIN7A-204ENST00000552864 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
LIN7A-204ENST00000552864 KRTAP2-2Q9BYT5 123 aa2.24□□□□□ -2.05
LIN7A-204ENST00000552864 KRTAP2-1Q9BYU5 128 aa2.24□□□□□ -2.05
LIN7A-204ENST00000552864 KRTAP4-3Q9BYR4 195 aa2.23□□□□□ -2.05
LIN7A-204ENST00000552864 MT1AP04731 61 aa2.22□□□□□ -2.05
LIN7A-204ENST00000552864 LCE4AQ5TA78 99 aa2.21□□□□□ -2.05
LIN7A-204ENST00000552864 SYNE2Q8WXH0 6885 aaKnown RBP2.21□□□□□ -2.06
LIN7A-204ENST00000552864 LOC100996750A0A140TA64 210 aa2.2□□□□□ -2.06
LIN7A-204ENST00000552864 MUC2Q02817 5179 aa2.19□□□□□ -2.06
LIN7A-204ENST00000552864 LCE5AQ5TCM9 118 aa2.18□□□□□ -2.06
LIN7A-204ENST00000552864 LCE1DQ5T752 114 aa2.13□□□□□ -2.07
LIN7A-204ENST00000552864 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
LIN7A-204ENST00000552864 KRTAP5-9P26371 169 aa2.09□□□□□ -2.08
LIN7A-204ENST00000552864 KRTAP4-9Q9BYQ8 210 aa2.09□□□□□ -2.08
LIN7A-204ENST00000552864 USH2AO75445 5202 aa2.06□□□□□ -2.08
LIN7A-204ENST00000552864 KRTAP9-4Q9BYQ2 154 aa2.06□□□□□ -2.08
LIN7A-204ENST00000552864 SYNE1Q8NF91 8797 aaKnown RBP2.05□□□□□ -2.08
LIN7A-204ENST00000552864 KRTAP6-1Q3LI64 71 aa2.03□□□□□ -2.08
LIN7A-204ENST00000552864 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
LIN7A-204ENST00000552864 SSPOA2VEC9 5147 aa2.01□□□□□ -2.09
LIN7A-204ENST00000552864 NEBP20929 6669 aa1.98□□□□□ -2.09
LIN7A-204ENST00000552864 PRM1P04553 51 aa1.94□□□□□ -2.1
LIN7A-204ENST00000552864 MACF1Q9UPN3 7388 aaKnown RBP1.94□□□□□ -2.1
LIN7A-204ENST00000552864 KRTAP9-6A8MVA2 160 aa1.94□□□□□ -2.1
LIN7A-204ENST00000552864 FCGBPQ9Y6R7 5405 aaPredicted RBP1.94□□□□□ -2.1
LIN7A-204ENST00000552864 OBSCNQ5VST9 7968 aa1.9□□□□□ -2.11
LIN7A-204ENST00000552864 KRTAP9-9Q9BYP9 154 aa1.88□□□□□ -2.11
LIN7A-204ENST00000552864 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.12
LIN7A-204ENST00000552864 KMT2DO14686 5537 aa1.82□□□□□ -2.12
LIN7A-204ENST00000552864 KRTAP4-6Q9BYQ5 205 aa1.82□□□□□ -2.12
LIN7A-204ENST00000552864 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
LIN7A-204ENST00000552864 LCE1EQ5T753 118 aa1.8□□□□□ -2.12
LIN7A-204ENST00000552864 LCE1FQ5T754 118 aa1.8□□□□□ -2.12
LIN7A-204ENST00000552864 KRTAP5-4Q6L8H1 288 aa1.78□□□□□ -2.12
LIN7A-204ENST00000552864 DSTQ03001 7570 aaKnown RBP1.75□□□□□ -2.13
LIN7A-204ENST00000552864 MDN1Q9NU22 5596 aa1.72□□□□□ -2.13
LIN7A-204ENST00000552864 MUC12Q9UKN1 5478 aa1.71□□□□□ -2.14
LIN7A-204ENST00000552864 KRTAP4-11Q9BYQ6 195 aa1.67□□□□□ -2.14
LIN7A-204ENST00000552864 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
LIN7A-204ENST00000552864 KRTAP5-5Q701N2 237 aaPredicted RBP1.64□□□□□ -2.15
LIN7A-204ENST00000552864 KRTAP5-2Q701N4 177 aa1.63□□□□□ -2.15
LIN7A-204ENST00000552864 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
LIN7A-204ENST00000552864 KRTAP5-3Q6L8H2 238 aa1.59□□□□□ -2.15
LIN7A-204ENST00000552864 KRTAP4-12Q9BQ66 201 aa1.49□□□□□ -2.17
LIN7A-204ENST00000552864 KRTAP4-2Q9BYR5 136 aa1.49□□□□□ -2.17
LIN7A-204ENST00000552864 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
LIN7A-204ENST00000552864 KRTAP5-8O75690 187 aa1.42□□□□□ -2.18
LIN7A-204ENST00000552864 KRTAP4-4Q9BYR3 166 aa1.42□□□□□ -2.18
LIN7A-204ENST00000552864 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
LIN7A-204ENST00000552864 HMCN1Q96RW7 5635 aa1.4□□□□□ -2.19
LIN7A-204ENST00000552864 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
LIN7A-204ENST00000552864 KRTAP5-10Q6L8G5 202 aa1.26□□□□□ -2.21
LIN7A-204ENST00000552864 KRTAP5-7Q6L8G8 165 aa1.24□□□□□ -2.21
LIN7A-204ENST00000552864 KRTAP5-11Q6L8G4 156 aa1.23□□□□□ -2.21
LIN7A-204ENST00000552864 KRTAP5-1Q6L8H4 278 aa1.23□□□□□ -2.21
LIN7A-204ENST00000552864 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
LIN7A-204ENST00000552864 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
LIN7A-204ENST00000552864 MUC5BQ9HC84 5762 aaPredicted RBP1.2□□□□□ -2.22
LIN7A-204ENST00000552864 KRTAP21-2Q3LI59 83 aa1.09□□□□□ -2.23
LIN7A-204ENST00000552864 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
LIN7A-204ENST00000552864 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 87.2 ms