RNA–Protein interactions for RNA: ENST00000551085.5

ERBB3-217, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 4,382 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-217ENST00000551085 LCE3BQ5TA77 95 aa3.66□□□□□ -1.82
ERBB3-217ENST00000551085 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.83
ERBB3-217ENST00000551085 LOC100996750A0A140TA64 210 aa3.63□□□□□ -1.83
ERBB3-217ENST00000551085 KMT2DO14686 5537 aa3.61□□□□□ -1.83
ERBB3-217ENST00000551085 USH2AO75445 5202 aa3.6□□□□□ -1.83
ERBB3-217ENST00000551085 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
ERBB3-217ENST00000551085 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
ERBB3-217ENST00000551085 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
ERBB3-217ENST00000551085 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
ERBB3-217ENST00000551085 PRM1P04553 51 aa3.52□□□□□ -1.85
ERBB3-217ENST00000551085 KRTAP19-3Q7Z4W3 81 aa3.47□□□□□ -1.85
ERBB3-217ENST00000551085 MT1MQ8N339 61 aa3.46□□□□□ -1.86
ERBB3-217ENST00000551085 KRTAP4-9Q9BYQ8 210 aa3.45□□□□□ -1.86
ERBB3-217ENST00000551085 DSTQ03001 7570 aaKnown RBP3.43□□□□□ -1.86
ERBB3-217ENST00000551085 LCE2AQ5TA79 106 aaPredicted RBP3.43□□□□□ -1.86
ERBB3-217ENST00000551085 FCGBPQ9Y6R7 5405 aaPredicted RBP3.43□□□□□ -1.86
ERBB3-217ENST00000551085 KRTAP9-2Q9BYQ4 174 aa3.39□□□□□ -1.87
ERBB3-217ENST00000551085 KRTAP9-6A0A140TA67 174 aa3.37□□□□□ -1.87
ERBB3-217ENST00000551085 SPRR2EP22531 72 aa3.37□□□□□ -1.87
ERBB3-217ENST00000551085 SPRR2BP35325 72 aa3.37□□□□□ -1.87
ERBB3-217ENST00000551085 SPRR2AP35326 72 aa3.37□□□□□ -1.87
ERBB3-217ENST00000551085 SYNE2Q8WXH0 6885 aaKnown RBP3.34□□□□□ -1.87
ERBB3-217ENST00000551085 KRTAP9-7A8MTY7 169 aa3.34□□□□□ -1.88
ERBB3-217ENST00000551085 MT1AP04731 61 aa3.32□□□□□ -1.88
ERBB3-217ENST00000551085 LCE2DQ5TA82 110 aaPredicted RBP3.28□□□□□ -1.88
ERBB3-217ENST00000551085 KRTAP19-6Q3LI70 58 aa3.27□□□□□ -1.89
ERBB3-217ENST00000551085 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
ERBB3-217ENST00000551085 SPRR2DP22532 72 aa3.22□□□□□ -1.89
ERBB3-217ENST00000551085 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
ERBB3-217ENST00000551085 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
ERBB3-217ENST00000551085 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
ERBB3-217ENST00000551085 LCE5AQ5TCM9 118 aa3.11□□□□□ -1.91
ERBB3-217ENST00000551085 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
ERBB3-217ENST00000551085 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.92
ERBB3-217ENST00000551085 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
ERBB3-217ENST00000551085 KRTAP6-3Q3LI67 103 aa3.04□□□□□ -1.92
ERBB3-217ENST00000551085 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
ERBB3-217ENST00000551085 MT3P25713 68 aa3.03□□□□□ -1.92
ERBB3-217ENST00000551085 MT4P47944 62 aa2.98□□□□□ -1.93
ERBB3-217ENST00000551085 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.95□□□□□ -1.94
ERBB3-217ENST00000551085 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
ERBB3-217ENST00000551085 KRTAP20-1Q3LI63 56 aa2.92□□□□□ -1.94
ERBB3-217ENST00000551085 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
ERBB3-217ENST00000551085 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
ERBB3-217ENST00000551085 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
ERBB3-217ENST00000551085 LCE1DQ5T752 114 aa2.77□□□□□ -1.97
ERBB3-217ENST00000551085 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
ERBB3-217ENST00000551085 KRTAP4-11Q9BYQ6 195 aa2.61□□□□□ -1.99
ERBB3-217ENST00000551085 NEBP20929 6669 aa2.6□□□□□ -1.99
ERBB3-217ENST00000551085 KRTAP5-9P26371 169 aa2.58□□□□□ -2
ERBB3-217ENST00000551085 KRTAP4-6Q9BYQ5 205 aa2.53□□□□□ -2
ERBB3-217ENST00000551085 LCE4AQ5TA78 99 aa2.52□□□□□ -2.01
ERBB3-217ENST00000551085 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
ERBB3-217ENST00000551085 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
ERBB3-217ENST00000551085 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
ERBB3-217ENST00000551085 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
ERBB3-217ENST00000551085 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
ERBB3-217ENST00000551085 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
ERBB3-217ENST00000551085 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
ERBB3-217ENST00000551085 LCE1CQ5T751 118 aa2.15□□□□□ -2.06
ERBB3-217ENST00000551085 KRTAP9-9Q9BYP9 154 aa2.15□□□□□ -2.06
ERBB3-217ENST00000551085 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
ERBB3-217ENST00000551085 KRTAP4-12Q9BQ66 201 aa2.09□□□□□ -2.08
ERBB3-217ENST00000551085 KRTAP4-2Q9BYR5 136 aa2.09□□□□□ -2.08
ERBB3-217ENST00000551085 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
ERBB3-217ENST00000551085 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
ERBB3-217ENST00000551085 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
ERBB3-217ENST00000551085 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
ERBB3-217ENST00000551085 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
ERBB3-217ENST00000551085 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
ERBB3-217ENST00000551085 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
ERBB3-217ENST00000551085 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
ERBB3-217ENST00000551085 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
ERBB3-217ENST00000551085 KRTAP5-7Q6L8G8 165 aa1.77□□□□□ -2.13
ERBB3-217ENST00000551085 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
ERBB3-217ENST00000551085 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
ERBB3-217ENST00000551085 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
ERBB3-217ENST00000551085 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms