RNA–Protein interactions for RNA: ENST00000550558.5

ASIC1-206, Transcript of acid sensing ion channel subunit 1, humanhuman

TSL 2

Gene ASIC1, Length 3,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1-206ENST00000550558 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
ASIC1-206ENST00000550558 SSPOA2VEC9 5147 aa5.77□□□□□ -1.49
ASIC1-206ENST00000550558 MT1LQ93083 61 aa5.74□□□□□ -1.49
ASIC1-206ENST00000550558 MT1EP04732 61 aa5.73□□□□□ -1.49
ASIC1-206ENST00000550558 LOC100996750A0A140TA64 210 aa5.71□□□□□ -1.5
ASIC1-206ENST00000550558 KRTAP9-6A8MVA2 160 aa5.67□□□□□ -1.5
ASIC1-206ENST00000550558 SYNE2Q8WXH0 6885 aaKnown RBP5.64□□□□□ -1.51
ASIC1-206ENST00000550558 KRTAP19-6Q3LI70 58 aa5.56□□□□□ -1.52
ASIC1-206ENST00000550558 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
ASIC1-206ENST00000550558 KRTAP19-3Q7Z4W3 81 aa5.51□□□□□ -1.53
ASIC1-206ENST00000550558 MT1MQ8N339 61 aa5.44□□□□□ -1.54
ASIC1-206ENST00000550558 MACF1Q9UPN3 7388 aaKnown RBP5.44□□□□□ -1.54
ASIC1-206ENST00000550558 SPRR2EP22531 72 aa5.37□□□□□ -1.55
ASIC1-206ENST00000550558 SPRR2BP35325 72 aa5.37□□□□□ -1.55
ASIC1-206ENST00000550558 SPRR2AP35326 72 aa5.37□□□□□ -1.55
ASIC1-206ENST00000550558 KRTAP12-4P60329 112 aa5.35□□□□□ -1.55
ASIC1-206ENST00000550558 LCE2DQ5TA82 110 aaPredicted RBP5.33□□□□□ -1.56
ASIC1-206ENST00000550558 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
ASIC1-206ENST00000550558 KRTAP9-2Q9BYQ4 174 aa5.29□□□□□ -1.56
ASIC1-206ENST00000550558 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
ASIC1-206ENST00000550558 KRTAP2-3P0C7H8 128 aa5.22□□□□□ -1.57
ASIC1-206ENST00000550558 KRTAP2-4Q9BYR9 128 aa5.22□□□□□ -1.57
ASIC1-206ENST00000550558 KRTAP2-1Q9BYU5 128 aa5.22□□□□□ -1.57
ASIC1-206ENST00000550558 MDN1Q9NU22 5596 aa5.18□□□□□ -1.58
ASIC1-206ENST00000550558 SPRR2DP22532 72 aa5.12□□□□□ -1.59
ASIC1-206ENST00000550558 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
ASIC1-206ENST00000550558 LCE3DQ9BYE3 92 aa5.01□□□□□ -1.61
ASIC1-206ENST00000550558 KRTAP6-1Q3LI64 71 aa4.97□□□□□ -1.61
ASIC1-206ENST00000550558 LCE1AQ5T7P2 110 aa4.92□□□□□ -1.62
ASIC1-206ENST00000550558 LCE3EQ5T5B0 92 aa4.89□□□□□ -1.63
ASIC1-206ENST00000550558 MT1AP04731 61 aa4.82□□□□□ -1.64
ASIC1-206ENST00000550558 MT4P47944 62 aa4.76□□□□□ -1.65
ASIC1-206ENST00000550558 PRM1P04553 51 aa4.7□□□□□ -1.66
ASIC1-206ENST00000550558 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.65□□□□□ -1.66
ASIC1-206ENST00000550558 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
ASIC1-206ENST00000550558 KRTAP9-6A0A140TA67 174 aa4.63□□□□□ -1.67
ASIC1-206ENST00000550558 KRTAP9-7A8MTY7 169 aa4.61□□□□□ -1.67
ASIC1-206ENST00000550558 MT3P25713 68 aa4.61□□□□□ -1.67
ASIC1-206ENST00000550558 KRTAP5-9P26371 169 aa4.52□□□□□ -1.69
ASIC1-206ENST00000550558 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
ASIC1-206ENST00000550558 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
ASIC1-206ENST00000550558 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
ASIC1-206ENST00000550558 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
ASIC1-206ENST00000550558 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
ASIC1-206ENST00000550558 NEBP20929 6669 aa4.24□□□□□ -1.73
ASIC1-206ENST00000550558 KRTAP5-5Q701N2 237 aaPredicted RBP4.22□□□□□ -1.73
ASIC1-206ENST00000550558 MUC19Q7Z5P9 8384 aa4.1□□□□□ -1.75
ASIC1-206ENST00000550558 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
ASIC1-206ENST00000550558 KRTAP20-1Q3LI63 56 aa4□□□□□ -1.77
ASIC1-206ENST00000550558 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
ASIC1-206ENST00000550558 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
ASIC1-206ENST00000550558 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
ASIC1-206ENST00000550558 HMCN1Q96RW7 5635 aa3.94□□□□□ -1.78
ASIC1-206ENST00000550558 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
ASIC1-206ENST00000550558 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.82
ASIC1-206ENST00000550558 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
ASIC1-206ENST00000550558 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
ASIC1-206ENST00000550558 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
ASIC1-206ENST00000550558 KRTAP5-3Q6L8H2 238 aa3.41□□□□□ -1.86
ASIC1-206ENST00000550558 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
ASIC1-206ENST00000550558 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
ASIC1-206ENST00000550558 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
ASIC1-206ENST00000550558 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
ASIC1-206ENST00000550558 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
ASIC1-206ENST00000550558 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
ASIC1-206ENST00000550558 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
ASIC1-206ENST00000550558 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
ASIC1-206ENST00000550558 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
ASIC1-206ENST00000550558 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
ASIC1-206ENST00000550558 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
ASIC1-206ENST00000550558 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
ASIC1-206ENST00000550558 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
ASIC1-206ENST00000550558 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.98
ASIC1-206ENST00000550558 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
ASIC1-206ENST00000550558 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
ASIC1-206ENST00000550558 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
ASIC1-206ENST00000550558 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
ASIC1-206ENST00000550558 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 54.2 ms