RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 LCE2DQ5TA82 110 aaPredicted RBP5.18□□□□□ -1.58
RBFOX1-212ENST00000550418 LCE2AQ5TA79 106 aaPredicted RBP5.17□□□□□ -1.58
RBFOX1-212ENST00000550418 LCE3EQ5T5B0 92 aa5.16□□□□□ -1.58
RBFOX1-212ENST00000550418 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
RBFOX1-212ENST00000550418 MT1LQ93083 61 aa5.12□□□□□ -1.59
RBFOX1-212ENST00000550418 KRTAP19-6Q3LI70 58 aa5.07□□□□□ -1.6
RBFOX1-212ENST00000550418 MT1EP04732 61 aa5.04□□□□□ -1.6
RBFOX1-212ENST00000550418 USH2AO75445 5202 aa5.01□□□□□ -1.61
RBFOX1-212ENST00000550418 KRTAP19-3Q7Z4W3 81 aa4.99□□□□□ -1.61
RBFOX1-212ENST00000550418 KRTAP9-7A8MTY7 169 aa4.95□□□□□ -1.62
RBFOX1-212ENST00000550418 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.63
RBFOX1-212ENST00000550418 PRM1P04553 51 aa4.88□□□□□ -1.63
RBFOX1-212ENST00000550418 KRTAP2-3P0C7H8 128 aa4.87□□□□□ -1.63
RBFOX1-212ENST00000550418 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
RBFOX1-212ENST00000550418 KRTAP2-1Q9BYU5 128 aa4.87□□□□□ -1.63
RBFOX1-212ENST00000550418 KRTAP19-7Q3SYF9 63 aa4.84□□□□□ -1.63
RBFOX1-212ENST00000550418 LOC100996750A0A140TA64 210 aa4.84□□□□□ -1.64
RBFOX1-212ENST00000550418 MT1MQ8N339 61 aa4.84□□□□□ -1.64
RBFOX1-212ENST00000550418 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.64
RBFOX1-212ENST00000550418 KMT2DO14686 5537 aa4.82□□□□□ -1.64
RBFOX1-212ENST00000550418 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
RBFOX1-212ENST00000550418 SYNE2Q8WXH0 6885 aaKnown RBP4.8□□□□□ -1.64
RBFOX1-212ENST00000550418 FCGBPQ9Y6R7 5405 aaPredicted RBP4.78□□□□□ -1.64
RBFOX1-212ENST00000550418 KRTAP20-1Q3LI63 56 aa4.78□□□□□ -1.64
RBFOX1-212ENST00000550418 MT4P47944 62 aa4.75□□□□□ -1.65
RBFOX1-212ENST00000550418 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
RBFOX1-212ENST00000550418 KRTAP6-3Q3LI67 103 aa4.72□□□□□ -1.65
RBFOX1-212ENST00000550418 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
RBFOX1-212ENST00000550418 MT3P25713 68 aa4.65□□□□□ -1.66
RBFOX1-212ENST00000550418 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
RBFOX1-212ENST00000550418 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
RBFOX1-212ENST00000550418 MT1AP04731 61 aa4.52□□□□□ -1.69
RBFOX1-212ENST00000550418 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
RBFOX1-212ENST00000550418 MUC12Q9UKN1 5478 aa4.52□□□□□ -1.69
RBFOX1-212ENST00000550418 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
RBFOX1-212ENST00000550418 MACF1Q9UPN3 7388 aaKnown RBP4.43□□□□□ -1.7
RBFOX1-212ENST00000550418 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.72
RBFOX1-212ENST00000550418 KRTAP6-2Q3LI66 62 aa4.31□□□□□ -1.72
RBFOX1-212ENST00000550418 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
RBFOX1-212ENST00000550418 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
RBFOX1-212ENST00000550418 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
RBFOX1-212ENST00000550418 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
RBFOX1-212ENST00000550418 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
RBFOX1-212ENST00000550418 NEBP20929 6669 aa4.12□□□□□ -1.75
RBFOX1-212ENST00000550418 GPR98Q8WXG9 6306 aa4.09□□□□□ -1.75
RBFOX1-212ENST00000550418 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
RBFOX1-212ENST00000550418 KRTAP5-9P26371 169 aa3.99□□□□□ -1.77
RBFOX1-212ENST00000550418 MUC19Q7Z5P9 8384 aa3.74□□□□□ -1.81
RBFOX1-212ENST00000550418 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
RBFOX1-212ENST00000550418 KRTAP4-6Q9BYQ5 205 aa3.68□□□□□ -1.82
RBFOX1-212ENST00000550418 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
RBFOX1-212ENST00000550418 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
RBFOX1-212ENST00000550418 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
RBFOX1-212ENST00000550418 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.83
RBFOX1-212ENST00000550418 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
RBFOX1-212ENST00000550418 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
RBFOX1-212ENST00000550418 KRTAP5-4Q6L8H1 288 aa3.37□□□□□ -1.87
RBFOX1-212ENST00000550418 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
RBFOX1-212ENST00000550418 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
RBFOX1-212ENST00000550418 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
RBFOX1-212ENST00000550418 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
RBFOX1-212ENST00000550418 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
RBFOX1-212ENST00000550418 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
RBFOX1-212ENST00000550418 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
RBFOX1-212ENST00000550418 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
RBFOX1-212ENST00000550418 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
RBFOX1-212ENST00000550418 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
RBFOX1-212ENST00000550418 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
RBFOX1-212ENST00000550418 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2.01
RBFOX1-212ENST00000550418 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
RBFOX1-212ENST00000550418 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
RBFOX1-212ENST00000550418 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.03
RBFOX1-212ENST00000550418 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
RBFOX1-212ENST00000550418 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
RBFOX1-212ENST00000550418 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
RBFOX1-212ENST00000550418 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
RBFOX1-212ENST00000550418 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 72.7 ms