RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 MT1EP04732 61 aa4.2□□□□□ -1.74
SLC38A1-206ENST00000549049 FCGBPQ9Y6R7 5405 aaPredicted RBP4.2□□□□□ -1.74
SLC38A1-206ENST00000549049 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
SLC38A1-206ENST00000549049 KRTAP2-3P0C7H8 128 aa4.14□□□□□ -1.75
SLC38A1-206ENST00000549049 KRTAP2-4Q9BYR9 128 aa4.14□□□□□ -1.75
SLC38A1-206ENST00000549049 KRTAP2-1Q9BYU5 128 aa4.14□□□□□ -1.75
SLC38A1-206ENST00000549049 MT1GP13640 62 aa4.13□□□□□ -1.75
SLC38A1-206ENST00000549049 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
SLC38A1-206ENST00000549049 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
SLC38A1-206ENST00000549049 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
SLC38A1-206ENST00000549049 MT1MQ8N339 61 aa3.94□□□□□ -1.78
SLC38A1-206ENST00000549049 KRTAP19-3Q7Z4W3 81 aa3.91□□□□□ -1.78
SLC38A1-206ENST00000549049 KRTAP12-4P60329 112 aa3.9□□□□□ -1.78
SLC38A1-206ENST00000549049 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.78
SLC38A1-206ENST00000549049 SYNE2Q8WXH0 6885 aaKnown RBP3.9□□□□□ -1.78
SLC38A1-206ENST00000549049 LCE3BQ5TA77 95 aa3.88□□□□□ -1.79
SLC38A1-206ENST00000549049 KRTAP4-9Q9BYQ8 210 aa3.88□□□□□ -1.79
SLC38A1-206ENST00000549049 KRTAP19-4Q3LI73 84 aa3.86□□□□□ -1.79
SLC38A1-206ENST00000549049 MACF1Q9UPN3 7388 aaKnown RBP3.84□□□□□ -1.79
SLC38A1-206ENST00000549049 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
SLC38A1-206ENST00000549049 LCE5AQ5TCM9 118 aa3.71□□□□□ -1.81
SLC38A1-206ENST00000549049 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
SLC38A1-206ENST00000549049 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
SLC38A1-206ENST00000549049 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
SLC38A1-206ENST00000549049 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.53□□□□□ -1.84
SLC38A1-206ENST00000549049 KRTAP9-2Q9BYQ4 174 aa3.53□□□□□ -1.85
SLC38A1-206ENST00000549049 KRTAP9-6A0A140TA67 174 aa3.5□□□□□ -1.85
SLC38A1-206ENST00000549049 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
SLC38A1-206ENST00000549049 MT1AP04731 61 aa3.49□□□□□ -1.85
SLC38A1-206ENST00000549049 SPRR2EP22531 72 aa3.48□□□□□ -1.85
SLC38A1-206ENST00000549049 SPRR2BP35325 72 aa3.48□□□□□ -1.85
SLC38A1-206ENST00000549049 SPRR2AP35326 72 aa3.48□□□□□ -1.85
SLC38A1-206ENST00000549049 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
SLC38A1-206ENST00000549049 PRM1P04553 51 aa3.47□□□□□ -1.85
SLC38A1-206ENST00000549049 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.86
SLC38A1-206ENST00000549049 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
SLC38A1-206ENST00000549049 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
SLC38A1-206ENST00000549049 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
SLC38A1-206ENST00000549049 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
SLC38A1-206ENST00000549049 SPRR2DP22532 72 aa3.3□□□□□ -1.88
SLC38A1-206ENST00000549049 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
SLC38A1-206ENST00000549049 LCE1DQ5T752 114 aa3.2□□□□□ -1.9
SLC38A1-206ENST00000549049 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
SLC38A1-206ENST00000549049 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
SLC38A1-206ENST00000549049 MT3P25713 68 aa3.17□□□□□ -1.9
SLC38A1-206ENST00000549049 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
SLC38A1-206ENST00000549049 KRTAP6-3Q3LI67 103 aa3.08□□□□□ -1.92
SLC38A1-206ENST00000549049 MT4P47944 62 aa3.06□□□□□ -1.92
SLC38A1-206ENST00000549049 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
SLC38A1-206ENST00000549049 KRTAP2-2Q9BYT5 123 aa2.97□□□□□ -1.93
SLC38A1-206ENST00000549049 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
SLC38A1-206ENST00000549049 NEBP20929 6669 aa2.86□□□□□ -1.95
SLC38A1-206ENST00000549049 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
SLC38A1-206ENST00000549049 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
SLC38A1-206ENST00000549049 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
SLC38A1-206ENST00000549049 MUC5ACP98088 5654 aa2.78□□□□□ -1.97
SLC38A1-206ENST00000549049 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
SLC38A1-206ENST00000549049 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
SLC38A1-206ENST00000549049 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
SLC38A1-206ENST00000549049 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
SLC38A1-206ENST00000549049 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
SLC38A1-206ENST00000549049 KRTAP20-1Q3LI63 56 aa2.52□□□□□ -2.01
SLC38A1-206ENST00000549049 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
SLC38A1-206ENST00000549049 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
SLC38A1-206ENST00000549049 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
SLC38A1-206ENST00000549049 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.35□□□□□ -2.03
SLC38A1-206ENST00000549049 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
SLC38A1-206ENST00000549049 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
SLC38A1-206ENST00000549049 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
SLC38A1-206ENST00000549049 KRTAP5-8O75690 187 aa2.15□□□□□ -2.06
SLC38A1-206ENST00000549049 GPR98Q8WXG9 6306 aa2.08□□□□□ -2.08
SLC38A1-206ENST00000549049 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
SLC38A1-206ENST00000549049 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
SLC38A1-206ENST00000549049 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
SLC38A1-206ENST00000549049 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
SLC38A1-206ENST00000549049 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
SLC38A1-206ENST00000549049 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 9.3 ms