RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
CACNB3-209ENST00000548860 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
CACNB3-209ENST00000548860 SYNE2Q8WXH0 6885 aaKnown RBP4.87□□□□□ -1.63
CACNB3-209ENST00000548860 SPRR2FQ96RM1 72 aa4.85□□□□□ -1.63
CACNB3-209ENST00000548860 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
CACNB3-209ENST00000548860 MT1LQ93083 61 aa4.78□□□□□ -1.64
CACNB3-209ENST00000548860 MT1EP04732 61 aa4.75□□□□□ -1.65
CACNB3-209ENST00000548860 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
CACNB3-209ENST00000548860 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
CACNB3-209ENST00000548860 MACF1Q9UPN3 7388 aaKnown RBP4.57□□□□□ -1.68
CACNB3-209ENST00000548860 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
CACNB3-209ENST00000548860 KRTAP19-3Q7Z4W3 81 aa4.52□□□□□ -1.69
CACNB3-209ENST00000548860 MT1MQ8N339 61 aa4.5□□□□□ -1.69
CACNB3-209ENST00000548860 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.7
CACNB3-209ENST00000548860 LCE2DQ5TA82 110 aaPredicted RBP4.45□□□□□ -1.7
CACNB3-209ENST00000548860 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
CACNB3-209ENST00000548860 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
CACNB3-209ENST00000548860 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
CACNB3-209ENST00000548860 MDN1Q9NU22 5596 aa4.36□□□□□ -1.71
CACNB3-209ENST00000548860 SPRR2EP22531 72 aa4.33□□□□□ -1.72
CACNB3-209ENST00000548860 SPRR2BP35325 72 aa4.33□□□□□ -1.72
CACNB3-209ENST00000548860 SPRR2AP35326 72 aa4.33□□□□□ -1.72
CACNB3-209ENST00000548860 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
CACNB3-209ENST00000548860 LCE3DQ9BYE3 92 aa4.22□□□□□ -1.73
CACNB3-209ENST00000548860 KRTAP6-1Q3LI64 71 aa4.18□□□□□ -1.74
CACNB3-209ENST00000548860 KRTAP9-2Q9BYQ4 174 aa4.15□□□□□ -1.75
CACNB3-209ENST00000548860 LCE5AQ5TCM9 118 aa4.14□□□□□ -1.75
CACNB3-209ENST00000548860 SPRR2DP22532 72 aa4.11□□□□□ -1.75
CACNB3-209ENST00000548860 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
CACNB3-209ENST00000548860 PRM1P04553 51 aa4.07□□□□□ -1.76
CACNB3-209ENST00000548860 KRTAP9-7A8MTY7 169 aa4.04□□□□□ -1.76
CACNB3-209ENST00000548860 MUC19Q7Z5P9 8384 aa4.01□□□□□ -1.77
CACNB3-209ENST00000548860 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
CACNB3-209ENST00000548860 MT1AP04731 61 aa3.96□□□□□ -1.78
CACNB3-209ENST00000548860 MT4P47944 62 aa3.91□□□□□ -1.78
CACNB3-209ENST00000548860 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
CACNB3-209ENST00000548860 KRTAP9-6A0A140TA67 174 aa3.79□□□□□ -1.8
CACNB3-209ENST00000548860 MT3P25713 68 aa3.77□□□□□ -1.81
CACNB3-209ENST00000548860 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
CACNB3-209ENST00000548860 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
CACNB3-209ENST00000548860 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
CACNB3-209ENST00000548860 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.65□□□□□ -1.83
CACNB3-209ENST00000548860 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
CACNB3-209ENST00000548860 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
CACNB3-209ENST00000548860 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
CACNB3-209ENST00000548860 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
CACNB3-209ENST00000548860 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
CACNB3-209ENST00000548860 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
CACNB3-209ENST00000548860 NEBP20929 6669 aa3.48□□□□□ -1.85
CACNB3-209ENST00000548860 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
CACNB3-209ENST00000548860 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
CACNB3-209ENST00000548860 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
CACNB3-209ENST00000548860 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
CACNB3-209ENST00000548860 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.9
CACNB3-209ENST00000548860 KRTAP4-11Q9BYQ6 195 aa3.19□□□□□ -1.9
CACNB3-209ENST00000548860 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
CACNB3-209ENST00000548860 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
CACNB3-209ENST00000548860 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
CACNB3-209ENST00000548860 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
CACNB3-209ENST00000548860 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
CACNB3-209ENST00000548860 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
CACNB3-209ENST00000548860 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
CACNB3-209ENST00000548860 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
CACNB3-209ENST00000548860 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
CACNB3-209ENST00000548860 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
CACNB3-209ENST00000548860 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
CACNB3-209ENST00000548860 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
CACNB3-209ENST00000548860 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
CACNB3-209ENST00000548860 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
CACNB3-209ENST00000548860 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
CACNB3-209ENST00000548860 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
CACNB3-209ENST00000548860 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
CACNB3-209ENST00000548860 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
CACNB3-209ENST00000548860 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
CACNB3-209ENST00000548860 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
CACNB3-209ENST00000548860 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
CACNB3-209ENST00000548860 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
CACNB3-209ENST00000548860 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 96.3 ms