RNA–Protein interactions for RNA: ENST00000548855.5

PDE1B-205, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best)

Gene PDE1B, Length 4,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-205ENST00000548855 KRTAP9-7A8MTY7 169 aa4.42□□□□□ -1.7
PDE1B-205ENST00000548855 MT1LQ93083 61 aa4.42□□□□□ -1.7
PDE1B-205ENST00000548855 MT1EP04732 61 aa4.41□□□□□ -1.7
PDE1B-205ENST00000548855 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
PDE1B-205ENST00000548855 KRTAP19-3Q7Z4W3 81 aa4.38□□□□□ -1.71
PDE1B-205ENST00000548855 LCE3BQ5TA77 95 aa4.36□□□□□ -1.71
PDE1B-205ENST00000548855 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
PDE1B-205ENST00000548855 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
PDE1B-205ENST00000548855 KRTAP19-7Q3SYF9 63 aa4.26□□□□□ -1.73
PDE1B-205ENST00000548855 KRTAP12-4P60329 112 aa4.24□□□□□ -1.73
PDE1B-205ENST00000548855 MT1MQ8N339 61 aa4.23□□□□□ -1.73
PDE1B-205ENST00000548855 KRTAP20-1Q3LI63 56 aa4.2□□□□□ -1.74
PDE1B-205ENST00000548855 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
PDE1B-205ENST00000548855 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.75
PDE1B-205ENST00000548855 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
PDE1B-205ENST00000548855 LCE3DQ9BYE3 92 aa4.1□□□□□ -1.75
PDE1B-205ENST00000548855 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
PDE1B-205ENST00000548855 KRTAP2-4Q9BYR9 128 aa4.07□□□□□ -1.76
PDE1B-205ENST00000548855 LCE3EQ5T5B0 92 aa4.03□□□□□ -1.76
PDE1B-205ENST00000548855 USH2AO75445 5202 aa4.03□□□□□ -1.76
PDE1B-205ENST00000548855 LCE1AQ5T7P2 110 aa4.02□□□□□ -1.77
PDE1B-205ENST00000548855 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
PDE1B-205ENST00000548855 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
PDE1B-205ENST00000548855 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
PDE1B-205ENST00000548855 KRTAP2-1Q9BYU5 128 aa3.92□□□□□ -1.78
PDE1B-205ENST00000548855 MT3P25713 68 aa3.89□□□□□ -1.79
PDE1B-205ENST00000548855 MT1AP04731 61 aa3.87□□□□□ -1.79
PDE1B-205ENST00000548855 KMT2DO14686 5537 aa3.87□□□□□ -1.79
PDE1B-205ENST00000548855 FCGBPQ9Y6R7 5405 aaPredicted RBP3.85□□□□□ -1.79
PDE1B-205ENST00000548855 LCE5AQ5TCM9 118 aa3.85□□□□□ -1.79
PDE1B-205ENST00000548855 MT4P47944 62 aa3.84□□□□□ -1.8
PDE1B-205ENST00000548855 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
PDE1B-205ENST00000548855 SSPOA2VEC9 5147 aa3.78□□□□□ -1.8
PDE1B-205ENST00000548855 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
PDE1B-205ENST00000548855 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
PDE1B-205ENST00000548855 KRTAP5-9P26371 169 aa3.75□□□□□ -1.81
PDE1B-205ENST00000548855 LCE4AQ5TA78 99 aa3.73□□□□□ -1.81
PDE1B-205ENST00000548855 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
PDE1B-205ENST00000548855 NEBP20929 6669 aa3.7□□□□□ -1.82
PDE1B-205ENST00000548855 PRM1P04553 51 aa3.68□□□□□ -1.82
PDE1B-205ENST00000548855 MACF1Q9UPN3 7388 aaKnown RBP3.66□□□□□ -1.82
PDE1B-205ENST00000548855 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.83
PDE1B-205ENST00000548855 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
PDE1B-205ENST00000548855 LCE1DQ5T752 114 aa3.57□□□□□ -1.84
PDE1B-205ENST00000548855 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
PDE1B-205ENST00000548855 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
PDE1B-205ENST00000548855 MDN1Q9NU22 5596 aa3.34□□□□□ -1.87
PDE1B-205ENST00000548855 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
PDE1B-205ENST00000548855 KRTAP4-6Q9BYQ5 205 aa3.16□□□□□ -1.9
PDE1B-205ENST00000548855 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
PDE1B-205ENST00000548855 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
PDE1B-205ENST00000548855 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
PDE1B-205ENST00000548855 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
PDE1B-205ENST00000548855 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
PDE1B-205ENST00000548855 KRTAP5-3Q6L8H2 238 aa2.89□□□□□ -1.95
PDE1B-205ENST00000548855 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
PDE1B-205ENST00000548855 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
PDE1B-205ENST00000548855 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
PDE1B-205ENST00000548855 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
PDE1B-205ENST00000548855 AHNAK2Q8IVF2 5795 aa2.78□□□□□ -1.96
PDE1B-205ENST00000548855 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
PDE1B-205ENST00000548855 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
PDE1B-205ENST00000548855 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
PDE1B-205ENST00000548855 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
PDE1B-205ENST00000548855 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
PDE1B-205ENST00000548855 KRTAP5-8O75690 187 aa2.54□□□□□ -2
PDE1B-205ENST00000548855 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
PDE1B-205ENST00000548855 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
PDE1B-205ENST00000548855 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
PDE1B-205ENST00000548855 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
PDE1B-205ENST00000548855 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
PDE1B-205ENST00000548855 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
PDE1B-205ENST00000548855 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
PDE1B-205ENST00000548855 PHGR1C9JFL3 82 aa2.09□□□□□ -2.08
PDE1B-205ENST00000548855 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
PDE1B-205ENST00000548855 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
PDE1B-205ENST00000548855 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
PDE1B-205ENST00000548855 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 64.6 ms