RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	MUC5AC	P98088	5654 aa		0.45	□□□□□ -2.34
LGR5-204	ENST00000547310	CENPE	Q02224	2701 aa		0.44	□□□□□ -2.34
LGR5-204	ENST00000547310	MUC17	Q685J3	4493 aa		0.44	□□□□□ -2.34
LGR5-204	ENST00000547310	HERC1	Q15751	4861 aa		0.43	□□□□□ -2.34
LGR5-204	ENST00000547310	PHGR1	C9JFL3	82 aa		0.43	□□□□□ -2.34
LGR5-204	ENST00000547310	MUC3A	Q02505	3323 aa		0.43	□□□□□ -2.34
LGR5-204	ENST00000547310	SPRR2G	Q9BYE4	73 aa		0.42	□□□□□ -2.34
LGR5-204	ENST00000547310	VPS13C	Q709C8	3753 aa		0.42	□□□□□ -2.34
LGR5-204	ENST00000547310	CEP295	Q9C0D2	2601 aa		0.41	□□□□□ -2.34
LGR5-204	ENST00000547310	HMCN2	Q8NDA2	5059 aa		0.41	□□□□□ -2.34
LGR5-204	ENST00000547310	WDFY4	Q6ZS81	3184 aa		0.41	□□□□□ -2.34
LGR5-204	ENST00000547310	LOC400499	M0QZD8	3231 aa		0.4	□□□□□ -2.35
LGR5-204	ENST00000547310	STAB2	Q8WWQ8	2551 aa		0.39	□□□□□ -2.35
LGR5-204	ENST00000547310	MT1X	P80297	61 aa		0.39	□□□□□ -2.35
LGR5-204	ENST00000547310	GPR98	Q8WXG9	6306 aa		0.38	□□□□□ -2.35
LGR5-204	ENST00000547310	TLN1	Q9Y490	2541 aa	Known RBP	0.37	□□□□□ -2.35
LGR5-204	ENST00000547310	CFAP47	Q6ZTR5	3102 aa		0.37	□□□□□ -2.35
LGR5-204	ENST00000547310	FAT4	Q6V0I7	4981 aa		0.36	□□□□□ -2.35
LGR5-204	ENST00000547310	SRCAP	Q6ZRS2	3230 aa		0.36	□□□□□ -2.35
LGR5-204	ENST00000547310	SPEG	Q15772	3267 aa		0.35	□□□□□ -2.35
LGR5-204	ENST00000547310	USP34	Q70CQ2	3546 aa		0.35	□□□□□ -2.35
LGR5-204	ENST00000547310	KMT2D	O14686	5537 aa		0.35	□□□□□ -2.35
LGR5-204	ENST00000547310	LRP2	P98164	4655 aa		0.35	□□□□□ -2.35
LGR5-204	ENST00000547310	LAMA2	P24043	3122 aa	Known RBP	0.34	□□□□□ -2.35
LGR5-204	ENST00000547310	MYO15A	Q9UKN7	3530 aa		0.33	□□□□□ -2.36
LGR5-204	ENST00000547310	STARD9	Q9P2P6	4700 aa		0.32	□□□□□ -2.36
LGR5-204	ENST00000547310	VPS13A	Q96RL7	3174 aa		0.31	□□□□□ -2.36
LGR5-204	ENST00000547310	ASPM	Q8IZT6	3477 aa		0.3	□□□□□ -2.36
LGR5-204	ENST00000547310	KRTAP19-8	Q3LI54	63 aa		0.3	□□□□□ -2.36
LGR5-204	ENST00000547310	GOLGB1	Q14789	3259 aa	Known RBP	0.3	□□□□□ -2.36
LGR5-204	ENST00000547310	EYS	Q5T1H1	3165 aa		0.3	□□□□□ -2.36
LGR5-204	ENST00000547310	UTRN	P46939	3433 aa		0.29	□□□□□ -2.36
LGR5-204	ENST00000547310	SSPO	A2VEC9	5147 aa		0.28	□□□□□ -2.36
LGR5-204	ENST00000547310	KRTAP19-7	Q3SYF9	63 aa		0.28	□□□□□ -2.36
LGR5-204	ENST00000547310	KMT2C	Q8NEZ4	4911 aa	Known RBP	0.28	□□□□□ -2.37
LGR5-204	ENST00000547310	MT1G	P13640	62 aa		0.27	□□□□□ -2.37
LGR5-204	ENST00000547310	MYO9A	B2RTY4	2548 aa		0.26	□□□□□ -2.37
LGR5-204	ENST00000547310	EP400	Q96L91	3159 aa		0.26	□□□□□ -2.37
LGR5-204	ENST00000547310	PCNT	O95613	3336 aa		0.26	□□□□□ -2.37
LGR5-204	ENST00000547310	VCAN	P13611	3396 aa		0.25	□□□□□ -2.37
LGR5-204	ENST00000547310	MT2A	P02795	61 aa		0.25	□□□□□ -2.37
LGR5-204	ENST00000547310	MT1M	Q8N339	61 aa		0.25	□□□□□ -2.37
LGR5-204	ENST00000547310	KRTAP6-1	Q3LI64	71 aa		0.24	□□□□□ -2.37
LGR5-204	ENST00000547310	DNHD1	Q96M86	4753 aa		0.24	□□□□□ -2.37
LGR5-204	ENST00000547310	PCLO	Q9Y6V0	5065 aa		0.24	□□□□□ -2.37
LGR5-204	ENST00000547310	USH2A	O75445	5202 aa		0.23	□□□□□ -2.37
LGR5-204	ENST00000547310	SYNE2	Q8WXH0	6885 aa	Known RBP	0.22	□□□□□ -2.37
LGR5-204	ENST00000547310	WDFY3	Q8IZQ1	3526 aa		0.2	□□□□□ -2.38
LGR5-204	ENST00000547310	MT1HL1	P0DM35	61 aa		0.2	□□□□□ -2.38
LGR5-204	ENST00000547310	FSIP2	Q5CZC0	6907 aa		0.2	□□□□□ -2.38
LGR5-204	ENST00000547310	UNC80	Q8N2C7	3258 aa		0.18	□□□□□ -2.38
LGR5-204	ENST00000547310	RYR1	P21817	5038 aa		0.17	□□□□□ -2.38
LGR5-204	ENST00000547310	MT1B	P07438	61 aa		0.17	□□□□□ -2.38
LGR5-204	ENST00000547310	BRCA2	P51587	3418 aa		0.16	□□□□□ -2.38
LGR5-204	ENST00000547310	KRTAP19-2	Q3LHN2	52 aa		0.16	□□□□□ -2.38
LGR5-204	ENST00000547310	MUC2	Q02817	5179 aa		0.15	□□□□□ -2.38
LGR5-204	ENST00000547310	UBR4	Q5T4S7	5183 aa		0.13	□□□□□ -2.39
LGR5-204	ENST00000547310	HERC2	O95714	4834 aa		0.12	□□□□□ -2.39
LGR5-204	ENST00000547310	DNAH14	Q0VDD8	3507 aa		0.11	□□□□□ -2.39
LGR5-204	ENST00000547310	CENPF	P49454	3210 aa		0.1	□□□□□ -2.39
LGR5-204	ENST00000547310	RYR3	Q15413	4870 aa		0.1	□□□□□ -2.39
LGR5-204	ENST00000547310	MT1F	P04733	61 aa		0.09	□□□□□ -2.4
LGR5-204	ENST00000547310	BIRC6	Q9NR09	4857 aa		0.09	□□□□□ -2.4
LGR5-204	ENST00000547310	MUC12	Q9UKN1	5478 aa		0.07	□□□□□ -2.4
LGR5-204	ENST00000547310	MACF1	Q9UPN3	7388 aa	Known RBP	0.05	□□□□□ -2.4
LGR5-204	ENST00000547310	MT4	P47944	62 aa		0.03	□□□□□ -2.4
LGR5-204	ENST00000547310	HYDIN	Q4G0P3	5121 aa		0.01	□□□□□ -2.41
LGR5-204	ENST00000547310	RNF213	Q63HN8	5207 aa		0.01	□□□□□ -2.41
LGR5-204	ENST00000547310	CDH23	Q9H251	3354 aa		0	□□□□□ -2.41
LGR5-204	ENST00000547310	KRTAP20-2	Q3LI61	65 aa		-0.02	□□□□□ -2.41
LGR5-204	ENST00000547310	EPPK1	P58107	5090 aa	Known RBP	-0.07	□□□□□ -2.42
LGR5-204	ENST00000547310	DST	Q03001	7570 aa	Known RBP	-0.12	□□□□□ -2.43
LGR5-204	ENST00000547310	KIAA1109	Q2LD37	5005 aa		-0.12	□□□□□ -2.43
LGR5-204	ENST00000547310	RYR2	Q92736	4967 aa		-0.13	□□□□□ -2.43
LGR5-204	ENST00000547310	ABCA13	Q86UQ4	5058 aa		-0.2	□□□□□ -2.44
LGR5-204	ENST00000547310	KRTAP19-6	Q3LI70	58 aa		-0.3	□□□□□ -2.46
LGR5-204	ENST00000547310	KRTAP20-1	Q3LI63	56 aa		-0.34	□□□□□ -2.46
LGR5-204	ENST00000547310	NEB	P20929	6669 aa		-0.39	□□□□□ -2.47

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