RNA–Protein interactions for RNA: ENST00000546711.5

FGD6-203, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 5 BASIC

Gene FGD6, Length 4,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-203ENST00000546711 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
FGD6-203ENST00000546711 FSIP2Q5CZC0 6907 aa4.58□□□□□ -1.68
FGD6-203ENST00000546711 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
FGD6-203ENST00000546711 KMT2DO14686 5537 aa4.57□□□□□ -1.68
FGD6-203ENST00000546711 KRTAP19-3Q7Z4W3 81 aa4.56□□□□□ -1.68
FGD6-203ENST00000546711 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
FGD6-203ENST00000546711 USH2AO75445 5202 aa4.53□□□□□ -1.68
FGD6-203ENST00000546711 MT1MQ8N339 61 aa4.5□□□□□ -1.69
FGD6-203ENST00000546711 KRTAP19-6Q3LI70 58 aa4.47□□□□□ -1.69
FGD6-203ENST00000546711 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
FGD6-203ENST00000546711 SPRR2EP22531 72 aa4.32□□□□□ -1.72
FGD6-203ENST00000546711 SPRR2BP35325 72 aa4.32□□□□□ -1.72
FGD6-203ENST00000546711 SPRR2AP35326 72 aa4.32□□□□□ -1.72
FGD6-203ENST00000546711 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
FGD6-203ENST00000546711 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
FGD6-203ENST00000546711 KRTAP4-9Q9BYQ8 210 aa4.23□□□□□ -1.73
FGD6-203ENST00000546711 FCGBPQ9Y6R7 5405 aaPredicted RBP4.22□□□□□ -1.73
FGD6-203ENST00000546711 DSTQ03001 7570 aaKnown RBP4.14□□□□□ -1.75
FGD6-203ENST00000546711 SPRR2DP22532 72 aa4.14□□□□□ -1.75
FGD6-203ENST00000546711 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
FGD6-203ENST00000546711 PRM1P04553 51 aa4.13□□□□□ -1.75
FGD6-203ENST00000546711 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
FGD6-203ENST00000546711 SSPOA2VEC9 5147 aa4.1□□□□□ -1.75
FGD6-203ENST00000546711 MT1AP04731 61 aa4.1□□□□□ -1.75
FGD6-203ENST00000546711 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
FGD6-203ENST00000546711 MUC12Q9UKN1 5478 aa4.08□□□□□ -1.76
FGD6-203ENST00000546711 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
FGD6-203ENST00000546711 MT3P25713 68 aa3.95□□□□□ -1.78
FGD6-203ENST00000546711 KRTAP9-7A8MTY7 169 aa3.89□□□□□ -1.79
FGD6-203ENST00000546711 KRTAP9-2Q9BYQ4 174 aa3.88□□□□□ -1.79
FGD6-203ENST00000546711 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
FGD6-203ENST00000546711 MACF1Q9UPN3 7388 aaKnown RBP3.82□□□□□ -1.8
FGD6-203ENST00000546711 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
FGD6-203ENST00000546711 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
FGD6-203ENST00000546711 MT4P47944 62 aa3.71□□□□□ -1.81
FGD6-203ENST00000546711 KRTAP5-9P26371 169 aa3.56□□□□□ -1.84
FGD6-203ENST00000546711 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
FGD6-203ENST00000546711 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
FGD6-203ENST00000546711 KRTAP6-3Q3LI67 103 aa3.53□□□□□ -1.84
FGD6-203ENST00000546711 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
FGD6-203ENST00000546711 MDN1Q9NU22 5596 aa3.5□□□□□ -1.85
FGD6-203ENST00000546711 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.44□□□□□ -1.86
FGD6-203ENST00000546711 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
FGD6-203ENST00000546711 KRTAP9-6A0A140TA67 174 aa3.37□□□□□ -1.87
FGD6-203ENST00000546711 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
FGD6-203ENST00000546711 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
FGD6-203ENST00000546711 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.9
FGD6-203ENST00000546711 NEBP20929 6669 aa3.11□□□□□ -1.91
FGD6-203ENST00000546711 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
FGD6-203ENST00000546711 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
FGD6-203ENST00000546711 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
FGD6-203ENST00000546711 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
FGD6-203ENST00000546711 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
FGD6-203ENST00000546711 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
FGD6-203ENST00000546711 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
FGD6-203ENST00000546711 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
FGD6-203ENST00000546711 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
FGD6-203ENST00000546711 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
FGD6-203ENST00000546711 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
FGD6-203ENST00000546711 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
FGD6-203ENST00000546711 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
FGD6-203ENST00000546711 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
FGD6-203ENST00000546711 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
FGD6-203ENST00000546711 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
FGD6-203ENST00000546711 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
FGD6-203ENST00000546711 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
FGD6-203ENST00000546711 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
FGD6-203ENST00000546711 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
FGD6-203ENST00000546711 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
FGD6-203ENST00000546711 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
FGD6-203ENST00000546711 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
FGD6-203ENST00000546711 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
FGD6-203ENST00000546711 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
FGD6-203ENST00000546711 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
FGD6-203ENST00000546711 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
FGD6-203ENST00000546711 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
FGD6-203ENST00000546711 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 53.7 ms