RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 SACSQ9NZJ4 4579 aa1.12□□□□□ -2.23
CPNE8-204ENST00000546603 DNAH5Q8TE73 4624 aa1.11□□□□□ -2.23
CPNE8-204ENST00000546603 TNXBP22105 4242 aa1.1□□□□□ -2.23
CPNE8-204ENST00000546603 UBR4Q5T4S7 5183 aa1.1□□□□□ -2.23
CPNE8-204ENST00000546603 MT2AP02795 61 aa1.1□□□□□ -2.23
CPNE8-204ENST00000546603 KRTAP2-3P0C7H8 128 aa1.1□□□□□ -2.23
CPNE8-204ENST00000546603 MT1XP80297 61 aa1.1□□□□□ -2.23
CPNE8-204ENST00000546603 KRTAP19-5Q3LI72 72 aa1.1□□□□□ -2.23
CPNE8-204ENST00000546603 KRTAP2-4Q9BYR9 128 aa1.1□□□□□ -2.23
CPNE8-204ENST00000546603 KRTAP2-1Q9BYU5 128 aa1.1□□□□□ -2.23
CPNE8-204ENST00000546603 LRP1Q07954 4544 aaKnown RBP1.1□□□□□ -2.23
CPNE8-204ENST00000546603 FAT2Q9NYQ8 4349 aa1.09□□□□□ -2.24
CPNE8-204ENST00000546603 MT1FP04733 61 aa1.08□□□□□ -2.24
CPNE8-204ENST00000546603 FLGP20930 4061 aaPredicted RBP1.08□□□□□ -2.24
CPNE8-204ENST00000546603 APOBP04114 4563 aaKnown RBP1.08□□□□□ -2.24
CPNE8-204ENST00000546603 MT1HP80294 61 aa1.07□□□□□ -2.24
CPNE8-204ENST00000546603 FAT3Q8TDW7 4589 aa1.06□□□□□ -2.24
CPNE8-204ENST00000546603 MT1BP07438 61 aa1.06□□□□□ -2.24
CPNE8-204ENST00000546603 HSPG2P98160 4391 aa1.05□□□□□ -2.24
CPNE8-204ENST00000546603 FAT1Q14517 4588 aa1.05□□□□□ -2.24
CPNE8-204ENST00000546603 MYCBP2O75592 4640 aa1.02□□□□□ -2.25
CPNE8-204ENST00000546603 DYNC1H1Q14204 4646 aaKnown RBP1.02□□□□□ -2.25
CPNE8-204ENST00000546603 LRP2P98164 4655 aa1.01□□□□□ -2.25
CPNE8-204ENST00000546603 MT1EP04732 61 aa1□□□□□ -2.25
CPNE8-204ENST00000546603 MT1LQ93083 61 aa1□□□□□ -2.25
CPNE8-204ENST00000546603 HYDINQ4G0P3 5121 aa0.99□□□□□ -2.25
CPNE8-204ENST00000546603 DNHD1Q96M86 4753 aa0.97□□□□□ -2.25
CPNE8-204ENST00000546603 MT1AP04731 61 aa0.96□□□□□ -2.26
CPNE8-204ENST00000546603 PCLOQ9Y6V0 5065 aa0.96□□□□□ -2.26
CPNE8-204ENST00000546603 MUC17Q685J3 4493 aa0.95□□□□□ -2.26
CPNE8-204ENST00000546603 MT1GP13640 62 aa0.95□□□□□ -2.26
CPNE8-204ENST00000546603 KRTAP19-7Q3SYF9 63 aa0.95□□□□□ -2.26
CPNE8-204ENST00000546603 AHNAK2Q8IVF2 5795 aa0.95□□□□□ -2.26
CPNE8-204ENST00000546603 KMT2CQ8NEZ4 4911 aaKnown RBP0.94□□□□□ -2.26
CPNE8-204ENST00000546603 RYR2Q92736 4967 aa0.93□□□□□ -2.26
CPNE8-204ENST00000546603 PRM1P04553 51 aa0.93□□□□□ -2.26
CPNE8-204ENST00000546603 KIAA1109Q2LD37 5005 aa0.93□□□□□ -2.26
CPNE8-204ENST00000546603 LPAP08519 4548 aa0.93□□□□□ -2.26
CPNE8-204ENST00000546603 MUC2Q02817 5179 aa0.92□□□□□ -2.26
CPNE8-204ENST00000546603 MACF1Q9UPN3 7388 aaKnown RBP0.92□□□□□ -2.26
CPNE8-204ENST00000546603 RYR1P21817 5038 aa0.91□□□□□ -2.26
CPNE8-204ENST00000546603 HERC1Q15751 4861 aa0.9□□□□□ -2.27
CPNE8-204ENST00000546603 KRTAP19-3Q7Z4W3 81 aa0.89□□□□□ -2.27
CPNE8-204ENST00000546603 MT1MQ8N339 61 aa0.89□□□□□ -2.27
CPNE8-204ENST00000546603 SPRR2FQ96RM1 72 aa0.88□□□□□ -2.27
CPNE8-204ENST00000546603 RYR3Q15413 4870 aa0.88□□□□□ -2.27
CPNE8-204ENST00000546603 SYNE2Q8WXH0 6885 aaKnown RBP0.86□□□□□ -2.27
CPNE8-204ENST00000546603 AHNAKQ09666 5890 aaKnown RBP0.86□□□□□ -2.27
CPNE8-204ENST00000546603 SPRR2AP35326 72 aa0.86□□□□□ -2.27
CPNE8-204ENST00000546603 ABCA13Q86UQ4 5058 aa0.85□□□□□ -2.27
CPNE8-204ENST00000546603 HMCN2Q8NDA2 5059 aa0.85□□□□□ -2.27
CPNE8-204ENST00000546603 KRTAP6-2Q3LI66 62 aa0.84□□□□□ -2.27
CPNE8-204ENST00000546603 BIRC6Q9NR09 4857 aa0.84□□□□□ -2.28
CPNE8-204ENST00000546603 SPRR2BP35325 72 aa0.83□□□□□ -2.28
CPNE8-204ENST00000546603 KRTAP19-6Q3LI70 58 aa0.83□□□□□ -2.28
CPNE8-204ENST00000546603 SPRR2EP22531 72 aa0.81□□□□□ -2.28
CPNE8-204ENST00000546603 KRTAP6-1Q3LI64 71 aa0.81□□□□□ -2.28
CPNE8-204ENST00000546603 NEBP20929 6669 aa0.81□□□□□ -2.28
CPNE8-204ENST00000546603 HERC2O95714 4834 aa0.81□□□□□ -2.28
CPNE8-204ENST00000546603 MUC5BQ9HC84 5762 aaPredicted RBP0.8□□□□□ -2.28
CPNE8-204ENST00000546603 SPRR2DP22532 72 aa0.8□□□□□ -2.28
CPNE8-204ENST00000546603 FSIP2Q5CZC0 6907 aa0.79□□□□□ -2.28
CPNE8-204ENST00000546603 EPPK1P58107 5090 aaKnown RBP0.75□□□□□ -2.29
CPNE8-204ENST00000546603 DSTQ03001 7570 aaKnown RBP0.73□□□□□ -2.29
CPNE8-204ENST00000546603 FAT4Q6V0I7 4981 aa0.71□□□□□ -2.3
CPNE8-204ENST00000546603 SYNE1Q8NF91 8797 aaKnown RBP0.7□□□□□ -2.3
CPNE8-204ENST00000546603 RNF213Q63HN8 5207 aa0.69□□□□□ -2.3
CPNE8-204ENST00000546603 KMT2DO14686 5537 aa0.69□□□□□ -2.3
CPNE8-204ENST00000546603 SSPOA2VEC9 5147 aa0.66□□□□□ -2.3
CPNE8-204ENST00000546603 MUC5ACP98088 5654 aa0.63□□□□□ -2.31
CPNE8-204ENST00000546603 MDN1Q9NU22 5596 aa0.61□□□□□ -2.31
CPNE8-204ENST00000546603 USH2AO75445 5202 aa0.61□□□□□ -2.31
CPNE8-204ENST00000546603 KRTAP20-1Q3LI63 56 aa0.6□□□□□ -2.31
CPNE8-204ENST00000546603 MT4P47944 62 aa0.58□□□□□ -2.32
CPNE8-204ENST00000546603 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
CPNE8-204ENST00000546603 KRTAP20-2Q3LI61 65 aa0.56□□□□□ -2.32
CPNE8-204ENST00000546603 MUC12Q9UKN1 5478 aa0.54□□□□□ -2.32
CPNE8-204ENST00000546603 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 44.3 ms