RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 KRTAP19-3Q7Z4W3 81 aa2.59□□□□□ -1.99
ATXN3-216ENST00000545170 KRTAP19-2Q3LHN2 52 aa2.58□□□□□ -2
ATXN3-216ENST00000545170 KRTAP9-8Q9BYQ0 159 aa2.57□□□□□ -2
ATXN3-216ENST00000545170 SSPOA2VEC9 5147 aa2.56□□□□□ -2
ATXN3-216ENST00000545170 MT1EP04732 61 aa2.56□□□□□ -2
ATXN3-216ENST00000545170 LCE2CQ5TA81 110 aa2.55□□□□□ -2
ATXN3-216ENST00000545170 FLGP20930 4061 aaPredicted RBP2.55□□□□□ -2
ATXN3-216ENST00000545170 LPAP08519 4548 aa2.54□□□□□ -2
ATXN3-216ENST00000545170 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
ATXN3-216ENST00000545170 KRTAP4-9Q9BYQ8 210 aa2.53□□□□□ -2
ATXN3-216ENST00000545170 KRTAP9-3Q9BYQ3 159 aa2.52□□□□□ -2.01
ATXN3-216ENST00000545170 KRTAP2-3P0C7H8 128 aa2.52□□□□□ -2.01
ATXN3-216ENST00000545170 KRTAP2-4Q9BYR9 128 aa2.52□□□□□ -2.01
ATXN3-216ENST00000545170 KRTAP2-1Q9BYU5 128 aa2.52□□□□□ -2.01
ATXN3-216ENST00000545170 USH2AO75445 5202 aa2.5□□□□□ -2.01
ATXN3-216ENST00000545170 LCE1DQ5T752 114 aa2.49□□□□□ -2.01
ATXN3-216ENST00000545170 KRTAP4-3Q9BYR4 195 aa2.49□□□□□ -2.01
ATXN3-216ENST00000545170 MT1MQ8N339 61 aa2.49□□□□□ -2.01
ATXN3-216ENST00000545170 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
ATXN3-216ENST00000545170 MT4P47944 62 aa2.43□□□□□ -2.02
ATXN3-216ENST00000545170 KRTAP9-7A8MTY7 169 aa2.43□□□□□ -2.02
ATXN3-216ENST00000545170 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
ATXN3-216ENST00000545170 MT1AP04731 61 aa2.38□□□□□ -2.03
ATXN3-216ENST00000545170 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.35□□□□□ -2.03
ATXN3-216ENST00000545170 LCE5AQ5TCM9 118 aa2.33□□□□□ -2.04
ATXN3-216ENST00000545170 FCGBPQ9Y6R7 5405 aaPredicted RBP2.32□□□□□ -2.04
ATXN3-216ENST00000545170 KRTAP19-6Q3LI70 58 aa2.3□□□□□ -2.04
ATXN3-216ENST00000545170 NEBP20929 6669 aa2.29□□□□□ -2.04
ATXN3-216ENST00000545170 KRTAP19-7Q3SYF9 63 aa2.29□□□□□ -2.04
ATXN3-216ENST00000545170 KRTAP9-6A8MVA2 160 aa2.27□□□□□ -2.05
ATXN3-216ENST00000545170 KRTAP6-3Q3LI67 103 aa2.26□□□□□ -2.05
ATXN3-216ENST00000545170 LCE4AQ5TA78 99 aa2.25□□□□□ -2.05
ATXN3-216ENST00000545170 KRTAP2-2Q9BYT5 123 aa2.24□□□□□ -2.05
ATXN3-216ENST00000545170 KRTAP6-1Q3LI64 71 aa2.24□□□□□ -2.05
ATXN3-216ENST00000545170 KRTAP9-4Q9BYQ2 154 aa2.19□□□□□ -2.06
ATXN3-216ENST00000545170 FSIP2Q5CZC0 6907 aa2.17□□□□□ -2.06
ATXN3-216ENST00000545170 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
ATXN3-216ENST00000545170 LCE1EQ5T753 118 aa2.17□□□□□ -2.06
ATXN3-216ENST00000545170 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
ATXN3-216ENST00000545170 LCE1AQ5T7P2 110 aa2.17□□□□□ -2.06
ATXN3-216ENST00000545170 KRTAP5-9P26371 169 aa2.17□□□□□ -2.06
ATXN3-216ENST00000545170 MACF1Q9UPN3 7388 aaKnown RBP2.15□□□□□ -2.06
ATXN3-216ENST00000545170 KRTAP4-11Q9BYQ6 195 aa2.12□□□□□ -2.07
ATXN3-216ENST00000545170 SYNE2Q8WXH0 6885 aaKnown RBP2.11□□□□□ -2.07
ATXN3-216ENST00000545170 KMT2DO14686 5537 aa2.05□□□□□ -2.08
ATXN3-216ENST00000545170 MDN1Q9NU22 5596 aa2.04□□□□□ -2.08
ATXN3-216ENST00000545170 SYNE1Q8NF91 8797 aaKnown RBP2.04□□□□□ -2.08
ATXN3-216ENST00000545170 MUC12Q9UKN1 5478 aa2□□□□□ -2.09
ATXN3-216ENST00000545170 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
ATXN3-216ENST00000545170 OBSCNQ5VST9 7968 aa1.9□□□□□ -2.11
ATXN3-216ENST00000545170 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
ATXN3-216ENST00000545170 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.11
ATXN3-216ENST00000545170 KRTAP9-9Q9BYP9 154 aa1.84□□□□□ -2.12
ATXN3-216ENST00000545170 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
ATXN3-216ENST00000545170 KRTAP5-5Q701N2 237 aaPredicted RBP1.81□□□□□ -2.12
ATXN3-216ENST00000545170 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
ATXN3-216ENST00000545170 KRTAP5-4Q6L8H1 288 aa1.76□□□□□ -2.13
ATXN3-216ENST00000545170 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
ATXN3-216ENST00000545170 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
ATXN3-216ENST00000545170 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
ATXN3-216ENST00000545170 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
ATXN3-216ENST00000545170 KRTAP4-12Q9BQ66 201 aa1.64□□□□□ -2.15
ATXN3-216ENST00000545170 KRTAP4-2Q9BYR5 136 aa1.64□□□□□ -2.15
ATXN3-216ENST00000545170 KRTAP4-6Q9BYQ5 205 aa1.63□□□□□ -2.15
ATXN3-216ENST00000545170 KRTAP5-3Q6L8H2 238 aa1.58□□□□□ -2.16
ATXN3-216ENST00000545170 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
ATXN3-216ENST00000545170 DSTQ03001 7570 aaKnown RBP1.53□□□□□ -2.16
ATXN3-216ENST00000545170 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
ATXN3-216ENST00000545170 KRTAP5-2Q701N4 177 aa1.53□□□□□ -2.16
ATXN3-216ENST00000545170 KRTAP5-8O75690 187 aa1.42□□□□□ -2.18
ATXN3-216ENST00000545170 KRTAP5-1Q6L8H4 278 aa1.33□□□□□ -2.2
ATXN3-216ENST00000545170 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
ATXN3-216ENST00000545170 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.19□□□□□ -2.22
ATXN3-216ENST00000545170 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
ATXN3-216ENST00000545170 KRTAP5-11Q6L8G4 156 aa1.14□□□□□ -2.23
ATXN3-216ENST00000545170 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
ATXN3-216ENST00000545170 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 73.4 ms