RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 MUC12Q9UKN1 5478 aa4.43□□□□□ -1.7
TUBGCP2-210ENST00000543663 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
TUBGCP2-210ENST00000543663 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
TUBGCP2-210ENST00000543663 SSPOA2VEC9 5147 aa4.33□□□□□ -1.72
TUBGCP2-210ENST00000543663 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
TUBGCP2-210ENST00000543663 LOC100996750A0A140TA64 210 aa4.29□□□□□ -1.72
TUBGCP2-210ENST00000543663 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
TUBGCP2-210ENST00000543663 MT1LQ93083 61 aa4.26□□□□□ -1.73
TUBGCP2-210ENST00000543663 MT1EP04732 61 aa4.26□□□□□ -1.73
TUBGCP2-210ENST00000543663 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
TUBGCP2-210ENST00000543663 SPRR2EP22531 72 aa4.18□□□□□ -1.74
TUBGCP2-210ENST00000543663 SPRR2BP35325 72 aa4.18□□□□□ -1.74
TUBGCP2-210ENST00000543663 SPRR2AP35326 72 aa4.18□□□□□ -1.74
TUBGCP2-210ENST00000543663 LCE2DQ5TA82 110 aaPredicted RBP4.16□□□□□ -1.74
TUBGCP2-210ENST00000543663 MACF1Q9UPN3 7388 aaKnown RBP4.14□□□□□ -1.75
TUBGCP2-210ENST00000543663 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
TUBGCP2-210ENST00000543663 KRTAP19-3Q7Z4W3 81 aa4.11□□□□□ -1.75
TUBGCP2-210ENST00000543663 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
TUBGCP2-210ENST00000543663 KRTAP9-2Q9BYQ4 174 aa4.06□□□□□ -1.76
TUBGCP2-210ENST00000543663 MT1MQ8N339 61 aa4.05□□□□□ -1.76
TUBGCP2-210ENST00000543663 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
TUBGCP2-210ENST00000543663 SPRR2DP22532 72 aa3.99□□□□□ -1.77
TUBGCP2-210ENST00000543663 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
TUBGCP2-210ENST00000543663 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
TUBGCP2-210ENST00000543663 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
TUBGCP2-210ENST00000543663 MDN1Q9NU22 5596 aa3.94□□□□□ -1.78
TUBGCP2-210ENST00000543663 PRM1P04553 51 aa3.91□□□□□ -1.78
TUBGCP2-210ENST00000543663 LCE5AQ5TCM9 118 aa3.8□□□□□ -1.8
TUBGCP2-210ENST00000543663 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
TUBGCP2-210ENST00000543663 MT4P47944 62 aa3.76□□□□□ -1.81
TUBGCP2-210ENST00000543663 KRTAP6-1Q3LI64 71 aa3.71□□□□□ -1.82
TUBGCP2-210ENST00000543663 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
TUBGCP2-210ENST00000543663 MT3P25713 68 aa3.68□□□□□ -1.82
TUBGCP2-210ENST00000543663 MT1AP04731 61 aa3.66□□□□□ -1.82
TUBGCP2-210ENST00000543663 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
TUBGCP2-210ENST00000543663 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
TUBGCP2-210ENST00000543663 KRTAP9-7A8MTY7 169 aa3.61□□□□□ -1.83
TUBGCP2-210ENST00000543663 KRTAP5-9P26371 169 aa3.59□□□□□ -1.84
TUBGCP2-210ENST00000543663 KRTAP9-6A0A140TA67 174 aa3.58□□□□□ -1.84
TUBGCP2-210ENST00000543663 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
TUBGCP2-210ENST00000543663 KRTAP6-3Q3LI67 103 aa3.55□□□□□ -1.84
TUBGCP2-210ENST00000543663 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
TUBGCP2-210ENST00000543663 KRTAP9-4Q9BYQ2 154 aa3.4□□□□□ -1.87
TUBGCP2-210ENST00000543663 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
TUBGCP2-210ENST00000543663 NEBP20929 6669 aa3.28□□□□□ -1.88
TUBGCP2-210ENST00000543663 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
TUBGCP2-210ENST00000543663 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
TUBGCP2-210ENST00000543663 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
TUBGCP2-210ENST00000543663 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
TUBGCP2-210ENST00000543663 KRTAP20-1Q3LI63 56 aa3.08□□□□□ -1.92
TUBGCP2-210ENST00000543663 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
TUBGCP2-210ENST00000543663 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
TUBGCP2-210ENST00000543663 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
TUBGCP2-210ENST00000543663 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
TUBGCP2-210ENST00000543663 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
TUBGCP2-210ENST00000543663 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
TUBGCP2-210ENST00000543663 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
TUBGCP2-210ENST00000543663 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
TUBGCP2-210ENST00000543663 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
TUBGCP2-210ENST00000543663 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
TUBGCP2-210ENST00000543663 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
TUBGCP2-210ENST00000543663 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
TUBGCP2-210ENST00000543663 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
TUBGCP2-210ENST00000543663 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
TUBGCP2-210ENST00000543663 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
TUBGCP2-210ENST00000543663 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
TUBGCP2-210ENST00000543663 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
TUBGCP2-210ENST00000543663 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
TUBGCP2-210ENST00000543663 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
TUBGCP2-210ENST00000543663 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
TUBGCP2-210ENST00000543663 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
TUBGCP2-210ENST00000543663 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
TUBGCP2-210ENST00000543663 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
TUBGCP2-210ENST00000543663 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
TUBGCP2-210ENST00000543663 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
TUBGCP2-210ENST00000543663 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
TUBGCP2-210ENST00000543663 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms