RNA–Protein interactions for RNA: ENST00000543470.5

RPS6KC1-207, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 2 BASIC

Gene RPS6KC1, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-207ENST00000543470 MT1EP04732 61 aa4.75□□□□□ -1.65
RPS6KC1-207ENST00000543470 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
RPS6KC1-207ENST00000543470 SPRR2EP22531 72 aa4.74□□□□□ -1.65
RPS6KC1-207ENST00000543470 SPRR2BP35325 72 aa4.74□□□□□ -1.65
RPS6KC1-207ENST00000543470 SPRR2AP35326 72 aa4.74□□□□□ -1.65
RPS6KC1-207ENST00000543470 DSTQ03001 7570 aaKnown RBP4.74□□□□□ -1.65
RPS6KC1-207ENST00000543470 KRTAP4-3Q9BYR4 195 aa4.73□□□□□ -1.65
RPS6KC1-207ENST00000543470 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.65
RPS6KC1-207ENST00000543470 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.65
RPS6KC1-207ENST00000543470 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.65
RPS6KC1-207ENST00000543470 FCGBPQ9Y6R7 5405 aaPredicted RBP4.69□□□□□ -1.66
RPS6KC1-207ENST00000543470 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
RPS6KC1-207ENST00000543470 LCE2AQ5TA79 106 aaPredicted RBP4.64□□□□□ -1.67
RPS6KC1-207ENST00000543470 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
RPS6KC1-207ENST00000543470 LCE3EQ5T5B0 92 aa4.58□□□□□ -1.68
RPS6KC1-207ENST00000543470 MUC12Q9UKN1 5478 aa4.56□□□□□ -1.68
RPS6KC1-207ENST00000543470 SPRR2DP22532 72 aa4.55□□□□□ -1.68
RPS6KC1-207ENST00000543470 SSPOA2VEC9 5147 aa4.49□□□□□ -1.69
RPS6KC1-207ENST00000543470 MT1MQ8N339 61 aa4.48□□□□□ -1.69
RPS6KC1-207ENST00000543470 SYNE2Q8WXH0 6885 aaKnown RBP4.44□□□□□ -1.7
RPS6KC1-207ENST00000543470 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
RPS6KC1-207ENST00000543470 KRTAP19-6Q3LI70 58 aa4.39□□□□□ -1.71
RPS6KC1-207ENST00000543470 LCE2DQ5TA82 110 aaPredicted RBP4.37□□□□□ -1.71
RPS6KC1-207ENST00000543470 PRM1P04553 51 aa4.32□□□□□ -1.72
RPS6KC1-207ENST00000543470 MACF1Q9UPN3 7388 aaKnown RBP4.3□□□□□ -1.72
RPS6KC1-207ENST00000543470 MT3P25713 68 aa4.23□□□□□ -1.73
RPS6KC1-207ENST00000543470 MT4P47944 62 aa4.18□□□□□ -1.74
RPS6KC1-207ENST00000543470 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
RPS6KC1-207ENST00000543470 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
RPS6KC1-207ENST00000543470 KRTAP9-2Q9BYQ4 174 aa4.11□□□□□ -1.75
RPS6KC1-207ENST00000543470 MT1AP04731 61 aa4.1□□□□□ -1.75
RPS6KC1-207ENST00000543470 MUC19Q7Z5P9 8384 aa4.09□□□□□ -1.75
RPS6KC1-207ENST00000543470 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
RPS6KC1-207ENST00000543470 KRTAP9-7A8MTY7 169 aa4.07□□□□□ -1.76
RPS6KC1-207ENST00000543470 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
RPS6KC1-207ENST00000543470 MDN1Q9NU22 5596 aa3.94□□□□□ -1.78
RPS6KC1-207ENST00000543470 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
RPS6KC1-207ENST00000543470 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
RPS6KC1-207ENST00000543470 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
RPS6KC1-207ENST00000543470 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
RPS6KC1-207ENST00000543470 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
RPS6KC1-207ENST00000543470 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.83
RPS6KC1-207ENST00000543470 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
RPS6KC1-207ENST00000543470 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
RPS6KC1-207ENST00000543470 KRTAP2-2Q9BYT5 123 aa3.51□□□□□ -1.85
RPS6KC1-207ENST00000543470 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.86
RPS6KC1-207ENST00000543470 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
RPS6KC1-207ENST00000543470 NEBP20929 6669 aa3.35□□□□□ -1.87
RPS6KC1-207ENST00000543470 KRTAP4-6Q9BYQ5 205 aa3.33□□□□□ -1.88
RPS6KC1-207ENST00000543470 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
RPS6KC1-207ENST00000543470 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
RPS6KC1-207ENST00000543470 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
RPS6KC1-207ENST00000543470 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
RPS6KC1-207ENST00000543470 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
RPS6KC1-207ENST00000543470 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
RPS6KC1-207ENST00000543470 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
RPS6KC1-207ENST00000543470 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
RPS6KC1-207ENST00000543470 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
RPS6KC1-207ENST00000543470 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
RPS6KC1-207ENST00000543470 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
RPS6KC1-207ENST00000543470 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
RPS6KC1-207ENST00000543470 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
RPS6KC1-207ENST00000543470 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
RPS6KC1-207ENST00000543470 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
RPS6KC1-207ENST00000543470 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
RPS6KC1-207ENST00000543470 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
RPS6KC1-207ENST00000543470 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
RPS6KC1-207ENST00000543470 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
RPS6KC1-207ENST00000543470 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
RPS6KC1-207ENST00000543470 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
RPS6KC1-207ENST00000543470 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
RPS6KC1-207ENST00000543470 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
RPS6KC1-207ENST00000543470 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
RPS6KC1-207ENST00000543470 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
RPS6KC1-207ENST00000543470 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
RPS6KC1-207ENST00000543470 PHGR1C9JFL3 82 aa1.9□□□□□ -2.1
RPS6KC1-207ENST00000543470 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 58.2 ms