RNA–Protein interactions for RNA: ENST00000542953.1

NPIPB3-211, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-211ENST00000542953 C20orf197Q8N268 126 aa1.85□□□□□ -2.11
NPIPB3-211ENST00000542953 ACYP2P14621 99 aa1.84□□□□□ -2.11
NPIPB3-211ENST00000542953 LINC01554Q52M75 96 aa1.84□□□□□ -2.11
NPIPB3-211ENST00000542953 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
NPIPB3-211ENST00000542953 LCE1BQ5T7P3 118 aa1.84□□□□□ -2.11
NPIPB3-211ENST00000542953 LCE3EQ5T5B0 92 aa1.83□□□□□ -2.12
NPIPB3-211ENST00000542953 CYSTM1Q9H1C7 97 aa1.82□□□□□ -2.12
NPIPB3-211ENST00000542953 SNURFQ9Y675 71 aa1.82□□□□□ -2.12
NPIPB3-211ENST00000542953 MUC5ACP98088 5654 aa1.82□□□□□ -2.12
NPIPB3-211ENST00000542953 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
NPIPB3-211ENST00000542953 K7ERU9 68 aa1.81□□□□□ -2.12
NPIPB3-211ENST00000542953 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
NPIPB3-211ENST00000542953 SMIM20Q8N5G0 67 aa1.81□□□□□ -2.12
NPIPB3-211ENST00000542953 MT1EP04732 61 aa1.8□□□□□ -2.12
NPIPB3-211ENST00000542953 KRTAP19-7Q3SYF9 63 aa1.8□□□□□ -2.12
NPIPB3-211ENST00000542953 PRAC1Q96KF2 57 aa1.8□□□□□ -2.12
NPIPB3-211ENST00000542953 SPANXA2-OT1Q8N9U9 137 aa1.79□□□□□ -2.12
NPIPB3-211ENST00000542953 SPTSSBQ8NFR3 76 aa1.79□□□□□ -2.12
NPIPB3-211ENST00000542953 CHKB-CPT1BH3BT56 60 aa1.77□□□□□ -2.13
NPIPB3-211ENST00000542953 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
NPIPB3-211ENST00000542953 SERP2Q8N6R1 65 aa1.77□□□□□ -2.13
NPIPB3-211ENST00000542953 MT1GP13640 62 aa1.76□□□□□ -2.13
NPIPB3-211ENST00000542953 PP632Q6XCG6 107 aa1.74□□□□□ -2.13
NPIPB3-211ENST00000542953 COA5Q86WW8 74 aa1.74□□□□□ -2.13
NPIPB3-211ENST00000542953 MT1MQ8N339 61 aa1.73□□□□□ -2.13
NPIPB3-211ENST00000542953 NDUFAF8A1L188 74 aa1.72□□□□□ -2.13
NPIPB3-211ENST00000542953 CAMK2N1Q7Z7J9 78 aa1.72□□□□□ -2.13
NPIPB3-211ENST00000542953 H7BZZ5 65 aa1.71□□□□□ -2.14
NPIPB3-211ENST00000542953 COX7CP15954 63 aa1.71□□□□□ -2.14
NPIPB3-211ENST00000542953 SPATA8Q6RVD6 105 aa1.71□□□□□ -2.14
NPIPB3-211ENST00000542953 A0A0D9SG42 100 aa1.7□□□□□ -2.14
NPIPB3-211ENST00000542953 KRTAP12-1P59990 96 aa1.7□□□□□ -2.14
NPIPB3-211ENST00000542953 A0A1B0GU33 70 aa1.69□□□□□ -2.14
NPIPB3-211ENST00000542953 KRTAP19-5Q3LI72 72 aa1.68□□□□□ -2.14
NPIPB3-211ENST00000542953 SERP1Q9Y6X1 66 aa1.68□□□□□ -2.14
NPIPB3-211ENST00000542953 SPINT4Q6UDR6 99 aa1.67□□□□□ -2.14
NPIPB3-211ENST00000542953 A8MU10 97 aa1.66□□□□□ -2.14
NPIPB3-211ENST00000542953 MT1LQ93083 61 aa1.66□□□□□ -2.14
NPIPB3-211ENST00000542953 KRTAP12-4P60329 112 aa1.65□□□□□ -2.15
NPIPB3-211ENST00000542953 V9GYY9 64 aa1.65□□□□□ -2.15
NPIPB3-211ENST00000542953 C10orf95Q9H7T3 257 aa1.64□□□□□ -2.15
NPIPB3-211ENST00000542953 A0A1B0GU69 56 aa1.63□□□□□ -2.15
NPIPB3-211ENST00000542953 SMIM26A0A096LP01 95 aa1.62□□□□□ -2.15
NPIPB3-211ENST00000542953 CCDC179H3BU77 68 aa1.62□□□□□ -2.15
NPIPB3-211ENST00000542953 ANAPC13Q9BS18 74 aa1.61□□□□□ -2.15
NPIPB3-211ENST00000542953 TNP1P09430 55 aa1.58□□□□□ -2.16
NPIPB3-211ENST00000542953 LINC01558Q9Y6Z2 57 aa1.58□□□□□ -2.16
NPIPB3-211ENST00000542953 SYNE1Q8NF91 8797 aaKnown RBP1.57□□□□□ -2.16
NPIPB3-211ENST00000542953 ATP5EP56381 51 aaPredicted RBP1.56□□□□□ -2.16
NPIPB3-211ENST00000542953 KRTAP12-3P60328 96 aa1.55□□□□□ -2.16
NPIPB3-211ENST00000542953 PRR15LQ9BU68 103 aa1.54□□□□□ -2.16
NPIPB3-211ENST00000542953 UQCR11O14957 56 aa1.52□□□□□ -2.17
NPIPB3-211ENST00000542953 TMEM258P61165 79 aa1.52□□□□□ -2.17
NPIPB3-211ENST00000542953 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
NPIPB3-211ENST00000542953 PSPHP1O15172 72 aa1.49□□□□□ -2.17
NPIPB3-211ENST00000542953 MIR22HGQ0VDD5 57 aa1.49□□□□□ -2.17
NPIPB3-211ENST00000542953 KRTAP25-1Q3LHN0 102 aa1.49□□□□□ -2.17
NPIPB3-211ENST00000542953 PRO0628Q9UI54 55 aa1.47□□□□□ -2.17
NPIPB3-211ENST00000542953 Q1T7F1 81 aa1.45□□□□□ -2.18
NPIPB3-211ENST00000542953 K7ERS5 55 aa1.42□□□□□ -2.18
NPIPB3-211ENST00000542953 KRTAP6-1Q3LI64 71 aa1.41□□□□□ -2.18
NPIPB3-211ENST00000542953 KRTAP6-2Q3LI66 62 aa1.41□□□□□ -2.18
NPIPB3-211ENST00000542953 MT1AP04731 61 aa1.4□□□□□ -2.19
NPIPB3-211ENST00000542953 LUZP6Q538Z0 58 aa1.4□□□□□ -2.19
NPIPB3-211ENST00000542953 A6NED7 52 aa1.38□□□□□ -2.19
NPIPB3-211ENST00000542953 ROMO1P60602 79 aa1.37□□□□□ -2.19
NPIPB3-211ENST00000542953 PMAIP1Q13794 54 aa1.37□□□□□ -2.19
NPIPB3-211ENST00000542953 LCE3DQ9BYE3 92 aa1.37□□□□□ -2.19
NPIPB3-211ENST00000542953 RPS28P62857 69 aaKnown RBP1.36□□□□□ -2.19
NPIPB3-211ENST00000542953 CDC42SE1Q9NRR8 79 aa1.36□□□□□ -2.19
NPIPB3-211ENST00000542953 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
NPIPB3-211ENST00000542953 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
NPIPB3-211ENST00000542953 KTN1-AS1Q86SY8 53 aa1.19□□□□□ -2.22
NPIPB3-211ENST00000542953 BRK1Q8WUW1 75 aa1.15□□□□□ -2.23
NPIPB3-211ENST00000542953 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
NPIPB3-211ENST00000542953 INE1O15225 51 aa0.9□□□□□ -2.27
NPIPB3-211ENST00000542953 PRM1P04553 51 aa0.7□□□□□ -2.3
NPIPB3-211ENST00000542953 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 151.5 ms