RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 KRTAP8-1Q8IUC2 63 aa2.27□□□□□ -2.05
XRCC4-206ENST00000542685 RYR2Q92736 4967 aa2.23□□□□□ -2.05
XRCC4-206ENST00000542685 SPRR2GQ9BYE4 73 aa2.23□□□□□ -2.05
XRCC4-206ENST00000542685 KRTAP4-1Q9BYQ7 146 aa2.23□□□□□ -2.05
XRCC4-206ENST00000542685 KRTAP12-4P60329 112 aa2.2□□□□□ -2.06
XRCC4-206ENST00000542685 RYR1P21817 5038 aa2.2□□□□□ -2.06
XRCC4-206ENST00000542685 LPAP08519 4548 aa2.2□□□□□ -2.06
XRCC4-206ENST00000542685 MUC17Q685J3 4493 aa2.19□□□□□ -2.06
XRCC4-206ENST00000542685 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
XRCC4-206ENST00000542685 LRP2P98164 4655 aa2.19□□□□□ -2.06
XRCC4-206ENST00000542685 PCLOQ9Y6V0 5065 aa2.17□□□□□ -2.06
XRCC4-206ENST00000542685 KMT2CQ8NEZ4 4911 aaKnown RBP2.16□□□□□ -2.06
XRCC4-206ENST00000542685 KRTAP2-3P0C7H8 128 aa2.12□□□□□ -2.07
XRCC4-206ENST00000542685 KRTAP19-8Q3LI54 63 aa2.12□□□□□ -2.07
XRCC4-206ENST00000542685 KRTAP2-4Q9BYR9 128 aa2.12□□□□□ -2.07
XRCC4-206ENST00000542685 KRTAP2-1Q9BYU5 128 aa2.12□□□□□ -2.07
XRCC4-206ENST00000542685 BIRC6Q9NR09 4857 aa2.1□□□□□ -2.07
XRCC4-206ENST00000542685 HERC1Q15751 4861 aa2.09□□□□□ -2.07
XRCC4-206ENST00000542685 RYR3Q15413 4870 aa2.08□□□□□ -2.08
XRCC4-206ENST00000542685 UBR4Q5T4S7 5183 aa2.08□□□□□ -2.08
XRCC4-206ENST00000542685 M0R2T5 61 aa2.07□□□□□ -2.08
XRCC4-206ENST00000542685 KIAA1109Q2LD37 5005 aa2.04□□□□□ -2.08
XRCC4-206ENST00000542685 CRCT1Q9UGL9 99 aa2.04□□□□□ -2.08
XRCC4-206ENST00000542685 MT1XP80297 61 aa2.03□□□□□ -2.08
XRCC4-206ENST00000542685 MT2AP02795 61 aa2.01□□□□□ -2.09
XRCC4-206ENST00000542685 MT1BP07438 61 aa2.01□□□□□ -2.09
XRCC4-206ENST00000542685 MT1HP80294 61 aa2.01□□□□□ -2.09
XRCC4-206ENST00000542685 EPPK1P58107 5090 aaKnown RBP2.01□□□□□ -2.09
XRCC4-206ENST00000542685 MT1FP04733 61 aa2□□□□□ -2.09
XRCC4-206ENST00000542685 ABCA13Q86UQ4 5058 aa1.99□□□□□ -2.09
XRCC4-206ENST00000542685 KRTAP6-3Q3LI67 103 aa1.93□□□□□ -2.1
XRCC4-206ENST00000542685 HERC2O95714 4834 aa1.92□□□□□ -2.1
XRCC4-206ENST00000542685 KRTAP19-5Q3LI72 72 aa1.91□□□□□ -2.1
XRCC4-206ENST00000542685 HMCN2Q8NDA2 5059 aa1.89□□□□□ -2.11
XRCC4-206ENST00000542685 FCGBPQ9Y6R7 5405 aaPredicted RBP1.82□□□□□ -2.12
XRCC4-206ENST00000542685 KRTAP19-7Q3SYF9 63 aa1.81□□□□□ -2.12
XRCC4-206ENST00000542685 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
XRCC4-206ENST00000542685 MT1LQ93083 61 aa1.78□□□□□ -2.12
XRCC4-206ENST00000542685 MUC2Q02817 5179 aa1.78□□□□□ -2.13
XRCC4-206ENST00000542685 MT1EP04732 61 aa1.77□□□□□ -2.13
XRCC4-206ENST00000542685 MT1AP04731 61 aa1.76□□□□□ -2.13
XRCC4-206ENST00000542685 FAT4Q6V0I7 4981 aa1.71□□□□□ -2.14
XRCC4-206ENST00000542685 PRM1P04553 51 aa1.7□□□□□ -2.14
XRCC4-206ENST00000542685 MT1GP13640 62 aa1.65□□□□□ -2.15
XRCC4-206ENST00000542685 RNF213Q63HN8 5207 aa1.65□□□□□ -2.15
XRCC4-206ENST00000542685 KRTAP19-6Q3LI70 58 aa1.64□□□□□ -2.15
XRCC4-206ENST00000542685 FSIP2Q5CZC0 6907 aa1.63□□□□□ -2.15
XRCC4-206ENST00000542685 KRTAP19-3Q7Z4W3 81 aa1.62□□□□□ -2.15
XRCC4-206ENST00000542685 MT1MQ8N339 61 aa1.62□□□□□ -2.15
XRCC4-206ENST00000542685 GPR98Q8WXG9 6306 aa1.6□□□□□ -2.15
XRCC4-206ENST00000542685 SPRR2FQ96RM1 72 aa1.58□□□□□ -2.16
XRCC4-206ENST00000542685 SPRR2AP35326 72 aa1.55□□□□□ -2.16
XRCC4-206ENST00000542685 SPRR2BP35325 72 aa1.52□□□□□ -2.17
XRCC4-206ENST00000542685 KRTAP6-2Q3LI66 62 aa1.52□□□□□ -2.17
XRCC4-206ENST00000542685 NEBP20929 6669 aa1.51□□□□□ -2.17
XRCC4-206ENST00000542685 SYNE2Q8WXH0 6885 aaKnown RBP1.49□□□□□ -2.17
XRCC4-206ENST00000542685 SYNE1Q8NF91 8797 aaKnown RBP1.47□□□□□ -2.17
XRCC4-206ENST00000542685 SSPOA2VEC9 5147 aa1.47□□□□□ -2.17
XRCC4-206ENST00000542685 KMT2DO14686 5537 aa1.47□□□□□ -2.17
XRCC4-206ENST00000542685 SPRR2EP22531 72 aa1.46□□□□□ -2.18
XRCC4-206ENST00000542685 SPRR2DP22532 72 aa1.46□□□□□ -2.18
XRCC4-206ENST00000542685 KRTAP6-1Q3LI64 71 aa1.46□□□□□ -2.18
XRCC4-206ENST00000542685 USH2AO75445 5202 aa1.46□□□□□ -2.18
XRCC4-206ENST00000542685 MACF1Q9UPN3 7388 aaKnown RBP1.37□□□□□ -2.19
XRCC4-206ENST00000542685 AHNAK2Q8IVF2 5795 aa1.29□□□□□ -2.2
XRCC4-206ENST00000542685 MUC12Q9UKN1 5478 aa1.25□□□□□ -2.21
XRCC4-206ENST00000542685 KRTAP20-1Q3LI63 56 aa1.24□□□□□ -2.21
XRCC4-206ENST00000542685 AHNAKQ09666 5890 aaKnown RBP1.23□□□□□ -2.21
XRCC4-206ENST00000542685 MDN1Q9NU22 5596 aa1.21□□□□□ -2.22
XRCC4-206ENST00000542685 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
XRCC4-206ENST00000542685 DSTQ03001 7570 aaKnown RBP1.17□□□□□ -2.22
XRCC4-206ENST00000542685 KRTAP5-10Q6L8G5 202 aa1.17□□□□□ -2.22
XRCC4-206ENST00000542685 MUC5BQ9HC84 5762 aaPredicted RBP1.16□□□□□ -2.22
XRCC4-206ENST00000542685 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
XRCC4-206ENST00000542685 KRTAP20-2Q3LI61 65 aa1.11□□□□□ -2.23
XRCC4-206ENST00000542685 MUC5ACP98088 5654 aa1.07□□□□□ -2.24
XRCC4-206ENST00000542685 MT4P47944 62 aa0.97□□□□□ -2.25
XRCC4-206ENST00000542685 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 90.2 ms