RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	SYNE1	Q8NF91	8797 aa	Known RBP	4.27	□□□□□ -1.73
ABCB8-222	ENST00000542328	MT1L	Q93083	61 aa		4.24	□□□□□ -1.73
ABCB8-222	ENST00000542328	USH2A	O75445	5202 aa		4.23	□□□□□ -1.73
ABCB8-222	ENST00000542328	SPRR5	A0A1B0GTR4	108 aa		4.22	□□□□□ -1.73
ABCB8-222	ENST00000542328	KRTAP19-7	Q3SYF9	63 aa		4.15	□□□□□ -1.75
ABCB8-222	ENST00000542328	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.14	□□□□□ -1.75
ABCB8-222	ENST00000542328	KRTAP9-7	A8MTY7	169 aa		4.13	□□□□□ -1.75
ABCB8-222	ENST00000542328	KRTAP6-3	Q3LI67	103 aa		4.13	□□□□□ -1.75
ABCB8-222	ENST00000542328	KRTAP4-7	Q9BYR0	210 aa		4.12	□□□□□ -1.75
ABCB8-222	ENST00000542328	MT1M	Q8N339	61 aa		4.11	□□□□□ -1.75
ABCB8-222	ENST00000542328	LCE3B	Q5TA77	95 aa		4.09	□□□□□ -1.75
ABCB8-222	ENST00000542328	KRTAP12-4	P60329	112 aa		4.04	□□□□□ -1.76
ABCB8-222	ENST00000542328	LCE1A	Q5T7P2	110 aa		4	□□□□□ -1.77
ABCB8-222	ENST00000542328	OBSCN	Q5VST9	7968 aa		3.98	□□□□□ -1.77
ABCB8-222	ENST00000542328	SSPO	A2VEC9	5147 aa		3.97	□□□□□ -1.77
ABCB8-222	ENST00000542328	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.96	□□□□□ -1.78
ABCB8-222	ENST00000542328	KRTAP4-3	Q9BYR4	195 aa		3.94	□□□□□ -1.78
ABCB8-222	ENST00000542328	LCE5A	Q5TCM9	118 aa		3.88	□□□□□ -1.79
ABCB8-222	ENST00000542328	KRTAP20-1	Q3LI63	56 aa		3.87	□□□□□ -1.79
ABCB8-222	ENST00000542328	SYNE2	Q8WXH0	6885 aa	Known RBP	3.85	□□□□□ -1.79
ABCB8-222	ENST00000542328	LOC100996750	A0A140TA64	210 aa		3.84	□□□□□ -1.79
ABCB8-222	ENST00000542328	KRTAP2-3	P0C7H8	128 aa		3.83	□□□□□ -1.8
ABCB8-222	ENST00000542328	KRTAP2-4	Q9BYR9	128 aa		3.83	□□□□□ -1.8
ABCB8-222	ENST00000542328	LCE3D	Q9BYE3	92 aa		3.82	□□□□□ -1.8
ABCB8-222	ENST00000542328	KRTAP5-9	P26371	169 aa		3.8	□□□□□ -1.8
ABCB8-222	ENST00000542328	MACF1	Q9UPN3	7388 aa	Known RBP	3.79	□□□□□ -1.8
ABCB8-222	ENST00000542328	MT4	P47944	62 aa		3.79	□□□□□ -1.8
ABCB8-222	ENST00000542328	LCE3E	Q5T5B0	92 aa		3.75	□□□□□ -1.81
ABCB8-222	ENST00000542328	MT1A	P04731	61 aa		3.73	□□□□□ -1.81
ABCB8-222	ENST00000542328	KRTAP2-2	Q9BYT5	123 aa		3.73	□□□□□ -1.81
ABCB8-222	ENST00000542328	KRTAP2-1	Q9BYU5	128 aa		3.73	□□□□□ -1.81
ABCB8-222	ENST00000542328	KMT2D	O14686	5537 aa		3.72	□□□□□ -1.81
ABCB8-222	ENST00000542328	DST	Q03001	7570 aa	Known RBP	3.71	□□□□□ -1.82
ABCB8-222	ENST00000542328	MT3	P25713	68 aa		3.69	□□□□□ -1.82
ABCB8-222	ENST00000542328	LCE4A	Q5TA78	99 aa		3.63	□□□□□ -1.83
ABCB8-222	ENST00000542328	MUC12	Q9UKN1	5478 aa		3.63	□□□□□ -1.83
ABCB8-222	ENST00000542328	KRTAP9-6	A8MVA2	160 aa		3.63	□□□□□ -1.83
ABCB8-222	ENST00000542328	KRTAP6-1	Q3LI64	71 aa		3.54	□□□□□ -1.84
ABCB8-222	ENST00000542328	NEB	P20929	6669 aa		3.53	□□□□□ -1.84
ABCB8-222	ENST00000542328	KRTAP4-9	Q9BYQ8	210 aa		3.52	□□□□□ -1.85
ABCB8-222	ENST00000542328	MDN1	Q9NU22	5596 aa		3.51	□□□□□ -1.85
ABCB8-222	ENST00000542328	KRTAP9-4	Q9BYQ2	154 aa		3.47	□□□□□ -1.85
ABCB8-222	ENST00000542328	PRM1	P04553	51 aa		3.42	□□□□□ -1.86
ABCB8-222	ENST00000542328	KRTAP6-2	Q3LI66	62 aa		3.41	□□□□□ -1.86
ABCB8-222	ENST00000542328	LCE1D	Q5T752	114 aa		3.39	□□□□□ -1.87
ABCB8-222	ENST00000542328	LCE1B	Q5T7P3	118 aa		3.36	□□□□□ -1.87
ABCB8-222	ENST00000542328	KRTAP4-6	Q9BYQ5	205 aa		3.23	□□□□□ -1.89
ABCB8-222	ENST00000542328	KRTAP20-2	Q3LI61	65 aa		3.2	□□□□□ -1.9
ABCB8-222	ENST00000542328	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.13	□□□□□ -1.91
ABCB8-222	ENST00000542328	KRTAP5-4	Q6L8H1	288 aa		3.1	□□□□□ -1.91
ABCB8-222	ENST00000542328	MUC19	Q7Z5P9	8384 aa		2.99	□□□□□ -1.93
ABCB8-222	ENST00000542328	GPR98	Q8WXG9	6306 aa		2.97	□□□□□ -1.93
ABCB8-222	ENST00000542328	KRTAP9-9	Q9BYP9	154 aa		2.92	□□□□□ -1.94
ABCB8-222	ENST00000542328	KRTAP4-11	Q9BYQ6	195 aa		2.87	□□□□□ -1.95
ABCB8-222	ENST00000542328	KRTAP5-3	Q6L8H2	238 aa		2.81	□□□□□ -1.96
ABCB8-222	ENST00000542328	LCE1E	Q5T753	118 aa		2.78	□□□□□ -1.96
ABCB8-222	ENST00000542328	HMCN1	Q96RW7	5635 aa		2.77	□□□□□ -1.97
ABCB8-222	ENST00000542328	LCE1C	Q5T751	118 aa		2.72	□□□□□ -1.97
ABCB8-222	ENST00000542328	LCE1F	Q5T754	118 aa		2.72	□□□□□ -1.97
ABCB8-222	ENST00000542328	KRTAP5-2	Q701N4	177 aa		2.71	□□□□□ -1.98
ABCB8-222	ENST00000542328	MUC5AC	P98088	5654 aa		2.62	□□□□□ -1.99
ABCB8-222	ENST00000542328	AHNAK2	Q8IVF2	5795 aa		2.59	□□□□□ -2
ABCB8-222	ENST00000542328	KRTAP5-8	O75690	187 aa		2.53	□□□□□ -2
ABCB8-222	ENST00000542328	KRTAP4-12	Q9BQ66	201 aa		2.46	□□□□□ -2.02
ABCB8-222	ENST00000542328	KRTAP4-2	Q9BYR5	136 aa		2.46	□□□□□ -2.02
ABCB8-222	ENST00000542328	KRTAP4-4	Q9BYR3	166 aa		2.44	□□□□□ -2.02
ABCB8-222	ENST00000542328	KRTAP5-10	Q6L8G5	202 aa		2.37	□□□□□ -2.03
ABCB8-222	ENST00000542328	KRTAP5-1	Q6L8H4	278 aa		2.36	□□□□□ -2.03
ABCB8-222	ENST00000542328	KRTAP5-7	Q6L8G8	165 aa		2.27	□□□□□ -2.05
ABCB8-222	ENST00000542328	AHNAK	Q09666	5890 aa	Known RBP	2.24	□□□□□ -2.05
ABCB8-222	ENST00000542328	KRTAP5-11	Q6L8G4	156 aa		2.19	□□□□□ -2.06
ABCB8-222	ENST00000542328	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.16	□□□□□ -2.06
ABCB8-222	ENST00000542328	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.1	□□□□□ -2.07
ABCB8-222	ENST00000542328	KRTAP21-2	Q3LI59	83 aa		2.05	□□□□□ -2.08
ABCB8-222	ENST00000542328	PHGR1	C9JFL3	82 aa		1.9	□□□□□ -2.1
ABCB8-222	ENST00000542328	KRTAP21-1	Q3LI58	79 aa		1.61	□□□□□ -2.15
ABCB8-222	ENST00000542328	MUC16	Q8WXI7	14507 aa		1.23	□□□□□ -2.21

Retrieved 77 of 20,778 RNA–protein pairs in 27.3 ms