RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 MT1LQ93083 61 aa5.2□□□□□ -1.58
CNOT9-208ENST00000542068 KRTAP4-3Q9BYR4 195 aa5.19□□□□□ -1.58
CNOT9-208ENST00000542068 SYNE1Q8NF91 8797 aaKnown RBP5.19□□□□□ -1.58
CNOT9-208ENST00000542068 KRTAP2-3P0C7H8 128 aa5.17□□□□□ -1.58
CNOT9-208ENST00000542068 KRTAP2-4Q9BYR9 128 aa5.17□□□□□ -1.58
CNOT9-208ENST00000542068 KRTAP2-1Q9BYU5 128 aa5.17□□□□□ -1.58
CNOT9-208ENST00000542068 LOC100996750A0A140TA64 210 aa5.16□□□□□ -1.58
CNOT9-208ENST00000542068 MT1GP13640 62 aa5.1□□□□□ -1.59
CNOT9-208ENST00000542068 MACF1Q9UPN3 7388 aaKnown RBP5.06□□□□□ -1.6
CNOT9-208ENST00000542068 KRTAP19-6Q3LI70 58 aa5.06□□□□□ -1.6
CNOT9-208ENST00000542068 SYNE2Q8WXH0 6885 aaKnown RBP5.03□□□□□ -1.6
CNOT9-208ENST00000542068 SPRR2FQ96RM1 72 aa5.03□□□□□ -1.6
CNOT9-208ENST00000542068 KRTAP19-3Q7Z4W3 81 aa4.9□□□□□ -1.62
CNOT9-208ENST00000542068 MT1MQ8N339 61 aa4.89□□□□□ -1.63
CNOT9-208ENST00000542068 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
CNOT9-208ENST00000542068 MDN1Q9NU22 5596 aa4.84□□□□□ -1.63
CNOT9-208ENST00000542068 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
CNOT9-208ENST00000542068 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
CNOT9-208ENST00000542068 KRTAP4-9Q9BYQ8 210 aa4.77□□□□□ -1.65
CNOT9-208ENST00000542068 LCE5AQ5TCM9 118 aa4.65□□□□□ -1.67
CNOT9-208ENST00000542068 KRTAP9-2Q9BYQ4 174 aa4.61□□□□□ -1.67
CNOT9-208ENST00000542068 SPRR2EP22531 72 aa4.54□□□□□ -1.68
CNOT9-208ENST00000542068 SPRR2BP35325 72 aa4.54□□□□□ -1.68
CNOT9-208ENST00000542068 SPRR2AP35326 72 aa4.54□□□□□ -1.68
CNOT9-208ENST00000542068 KRTAP6-1Q3LI64 71 aa4.5□□□□□ -1.69
CNOT9-208ENST00000542068 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
CNOT9-208ENST00000542068 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
CNOT9-208ENST00000542068 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
CNOT9-208ENST00000542068 PRM1P04553 51 aa4.34□□□□□ -1.72
CNOT9-208ENST00000542068 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
CNOT9-208ENST00000542068 SPRR2DP22532 72 aa4.32□□□□□ -1.72
CNOT9-208ENST00000542068 MT1AP04731 61 aa4.31□□□□□ -1.72
CNOT9-208ENST00000542068 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
CNOT9-208ENST00000542068 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
CNOT9-208ENST00000542068 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
CNOT9-208ENST00000542068 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.1□□□□□ -1.75
CNOT9-208ENST00000542068 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
CNOT9-208ENST00000542068 MT4P47944 62 aa3.99□□□□□ -1.77
CNOT9-208ENST00000542068 MT3P25713 68 aa3.97□□□□□ -1.77
CNOT9-208ENST00000542068 KRTAP6-3Q3LI67 103 aa3.97□□□□□ -1.77
CNOT9-208ENST00000542068 KRTAP9-6A0A140TA67 174 aa3.94□□□□□ -1.78
CNOT9-208ENST00000542068 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
CNOT9-208ENST00000542068 KRTAP4-6Q9BYQ5 205 aa3.85□□□□□ -1.79
CNOT9-208ENST00000542068 NEBP20929 6669 aa3.84□□□□□ -1.79
CNOT9-208ENST00000542068 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
CNOT9-208ENST00000542068 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
CNOT9-208ENST00000542068 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
CNOT9-208ENST00000542068 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
CNOT9-208ENST00000542068 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
CNOT9-208ENST00000542068 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
CNOT9-208ENST00000542068 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
CNOT9-208ENST00000542068 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
CNOT9-208ENST00000542068 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
CNOT9-208ENST00000542068 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
CNOT9-208ENST00000542068 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
CNOT9-208ENST00000542068 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
CNOT9-208ENST00000542068 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
CNOT9-208ENST00000542068 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
CNOT9-208ENST00000542068 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
CNOT9-208ENST00000542068 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
CNOT9-208ENST00000542068 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
CNOT9-208ENST00000542068 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
CNOT9-208ENST00000542068 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
CNOT9-208ENST00000542068 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
CNOT9-208ENST00000542068 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
CNOT9-208ENST00000542068 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
CNOT9-208ENST00000542068 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
CNOT9-208ENST00000542068 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
CNOT9-208ENST00000542068 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
CNOT9-208ENST00000542068 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
CNOT9-208ENST00000542068 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
CNOT9-208ENST00000542068 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
CNOT9-208ENST00000542068 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
CNOT9-208ENST00000542068 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
CNOT9-208ENST00000542068 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
CNOT9-208ENST00000542068 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
CNOT9-208ENST00000542068 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 96.8 ms