RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 MT1GP13640 62 aa3.4□□□□□ -1.86
PHC1-208ENST00000540574 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.86
PHC1-208ENST00000540574 KRTAP19-7Q3SYF9 63 aa3.4□□□□□ -1.87
PHC1-208ENST00000540574 LOC100996750A0A140TA64 210 aa3.37□□□□□ -1.87
PHC1-208ENST00000540574 KRTAP9-6A8MVA2 160 aa3.37□□□□□ -1.87
PHC1-208ENST00000540574 MT1LQ93083 61 aa3.36□□□□□ -1.87
PHC1-208ENST00000540574 MT1EP04732 61 aa3.35□□□□□ -1.87
PHC1-208ENST00000540574 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
PHC1-208ENST00000540574 LCE3BQ5TA77 95 aa3.24□□□□□ -1.89
PHC1-208ENST00000540574 MACF1Q9UPN3 7388 aaKnown RBP3.23□□□□□ -1.89
PHC1-208ENST00000540574 KRTAP19-6Q3LI70 58 aa3.23□□□□□ -1.89
PHC1-208ENST00000540574 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
PHC1-208ENST00000540574 MT1MQ8N339 61 aa3.18□□□□□ -1.9
PHC1-208ENST00000540574 KRTAP12-4P60329 112 aa3.15□□□□□ -1.91
PHC1-208ENST00000540574 KRTAP4-9Q9BYQ8 210 aa3.11□□□□□ -1.91
PHC1-208ENST00000540574 MDN1Q9NU22 5596 aa3.11□□□□□ -1.91
PHC1-208ENST00000540574 SPRR2EP22531 72 aa3.09□□□□□ -1.91
PHC1-208ENST00000540574 SPRR2BP35325 72 aa3.09□□□□□ -1.91
PHC1-208ENST00000540574 SPRR2AP35326 72 aa3.09□□□□□ -1.91
PHC1-208ENST00000540574 KRTAP2-3P0C7H8 128 aa3.08□□□□□ -1.92
PHC1-208ENST00000540574 KRTAP2-4Q9BYR9 128 aa3.08□□□□□ -1.92
PHC1-208ENST00000540574 KRTAP2-1Q9BYU5 128 aa3.08□□□□□ -1.92
PHC1-208ENST00000540574 KRTAP19-4Q3LI73 84 aa3.06□□□□□ -1.92
PHC1-208ENST00000540574 KRTAP9-2Q9BYQ4 174 aa3.04□□□□□ -1.92
PHC1-208ENST00000540574 LCE5AQ5TCM9 118 aa2.95□□□□□ -1.94
PHC1-208ENST00000540574 SPRR2DP22532 72 aa2.94□□□□□ -1.94
PHC1-208ENST00000540574 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
PHC1-208ENST00000540574 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
PHC1-208ENST00000540574 LCE1AQ5T7P2 110 aa2.86□□□□□ -1.95
PHC1-208ENST00000540574 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
PHC1-208ENST00000540574 MT1AP04731 61 aa2.8□□□□□ -1.96
PHC1-208ENST00000540574 PRM1P04553 51 aa2.77□□□□□ -1.97
PHC1-208ENST00000540574 MT4P47944 62 aa2.76□□□□□ -1.97
PHC1-208ENST00000540574 KRTAP9-7A8MTY7 169 aa2.74□□□□□ -1.97
PHC1-208ENST00000540574 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
PHC1-208ENST00000540574 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.67□□□□□ -1.98
PHC1-208ENST00000540574 MT3P25713 68 aa2.67□□□□□ -1.98
PHC1-208ENST00000540574 KRTAP9-6A0A140TA67 174 aa2.63□□□□□ -1.99
PHC1-208ENST00000540574 KRTAP9-4Q9BYQ2 154 aa2.63□□□□□ -1.99
PHC1-208ENST00000540574 KRTAP5-9P26371 169 aa2.62□□□□□ -1.99
PHC1-208ENST00000540574 KRTAP6-3Q3LI67 103 aa2.57□□□□□ -2
PHC1-208ENST00000540574 LCE1DQ5T752 114 aa2.53□□□□□ -2
PHC1-208ENST00000540574 KRTAP4-6Q9BYQ5 205 aa2.51□□□□□ -2.01
PHC1-208ENST00000540574 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
PHC1-208ENST00000540574 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
PHC1-208ENST00000540574 NEBP20929 6669 aa2.47□□□□□ -2.01
PHC1-208ENST00000540574 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
PHC1-208ENST00000540574 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
PHC1-208ENST00000540574 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
PHC1-208ENST00000540574 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
PHC1-208ENST00000540574 KRTAP2-2Q9BYT5 123 aa2.28□□□□□ -2.04
PHC1-208ENST00000540574 LCE4AQ5TA78 99 aa2.28□□□□□ -2.04
PHC1-208ENST00000540574 KRTAP20-1Q3LI63 56 aa2.26□□□□□ -2.05
PHC1-208ENST00000540574 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
PHC1-208ENST00000540574 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
PHC1-208ENST00000540574 KRTAP4-11Q9BYQ6 195 aa2.16□□□□□ -2.06
PHC1-208ENST00000540574 KRTAP4-12Q9BQ66 201 aa2.11□□□□□ -2.07
PHC1-208ENST00000540574 LCE1FQ5T754 118 aa2.1□□□□□ -2.07
PHC1-208ENST00000540574 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
PHC1-208ENST00000540574 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
PHC1-208ENST00000540574 KRTAP5-3Q6L8H2 238 aa1.99□□□□□ -2.09
PHC1-208ENST00000540574 KRTAP9-9Q9BYP9 154 aa1.99□□□□□ -2.09
PHC1-208ENST00000540574 KRTAP4-2Q9BYR5 136 aa1.96□□□□□ -2.1
PHC1-208ENST00000540574 AHNAK2Q8IVF2 5795 aa1.95□□□□□ -2.1
PHC1-208ENST00000540574 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
PHC1-208ENST00000540574 GPR98Q8WXG9 6306 aa1.9□□□□□ -2.11
PHC1-208ENST00000540574 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
PHC1-208ENST00000540574 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
PHC1-208ENST00000540574 KRTAP5-1Q6L8H4 278 aa1.8□□□□□ -2.12
PHC1-208ENST00000540574 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
PHC1-208ENST00000540574 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
PHC1-208ENST00000540574 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
PHC1-208ENST00000540574 KRTAP5-11Q6L8G4 156 aa1.54□□□□□ -2.16
PHC1-208ENST00000540574 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.16
PHC1-208ENST00000540574 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
PHC1-208ENST00000540574 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
PHC1-208ENST00000540574 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
PHC1-208ENST00000540574 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 204.6 ms