RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
INO80E-203ENST00000540562 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
INO80E-203ENST00000540562 MT1LQ93083 61 aa4.84□□□□□ -1.63
INO80E-203ENST00000540562 MT1EP04732 61 aa4.83□□□□□ -1.64
INO80E-203ENST00000540562 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
INO80E-203ENST00000540562 MT1GP13640 62 aa4.76□□□□□ -1.65
INO80E-203ENST00000540562 SYNE2Q8WXH0 6885 aaKnown RBP4.71□□□□□ -1.66
INO80E-203ENST00000540562 MACF1Q9UPN3 7388 aaKnown RBP4.69□□□□□ -1.66
INO80E-203ENST00000540562 KRTAP2-3P0C7H8 128 aa4.64□□□□□ -1.67
INO80E-203ENST00000540562 KRTAP2-4Q9BYR9 128 aa4.64□□□□□ -1.67
INO80E-203ENST00000540562 KRTAP2-1Q9BYU5 128 aa4.64□□□□□ -1.67
INO80E-203ENST00000540562 KRTAP19-6Q3LI70 58 aa4.6□□□□□ -1.67
INO80E-203ENST00000540562 SPRR2FQ96RM1 72 aa4.57□□□□□ -1.68
INO80E-203ENST00000540562 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
INO80E-203ENST00000540562 MT1MQ8N339 61 aa4.53□□□□□ -1.68
INO80E-203ENST00000540562 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
INO80E-203ENST00000540562 LCE3BQ5TA77 95 aa4.47□□□□□ -1.69
INO80E-203ENST00000540562 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
INO80E-203ENST00000540562 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
INO80E-203ENST00000540562 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
INO80E-203ENST00000540562 KRTAP19-4Q3LI73 84 aa4.26□□□□□ -1.73
INO80E-203ENST00000540562 KRTAP9-2Q9BYQ4 174 aa4.25□□□□□ -1.73
INO80E-203ENST00000540562 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
INO80E-203ENST00000540562 SPRR2EP22531 72 aa4.08□□□□□ -1.76
INO80E-203ENST00000540562 SPRR2BP35325 72 aa4.08□□□□□ -1.76
INO80E-203ENST00000540562 SPRR2AP35326 72 aa4.08□□□□□ -1.76
INO80E-203ENST00000540562 LCE1AQ5T7P2 110 aa4.06□□□□□ -1.76
INO80E-203ENST00000540562 KRTAP9-6A0A140TA67 174 aa4.05□□□□□ -1.76
INO80E-203ENST00000540562 KRTAP9-7A8MTY7 169 aa4.03□□□□□ -1.76
INO80E-203ENST00000540562 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
INO80E-203ENST00000540562 MT1AP04731 61 aa3.97□□□□□ -1.77
INO80E-203ENST00000540562 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
INO80E-203ENST00000540562 PRM1P04553 51 aa3.91□□□□□ -1.78
INO80E-203ENST00000540562 SPRR2DP22532 72 aa3.87□□□□□ -1.79
INO80E-203ENST00000540562 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
INO80E-203ENST00000540562 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
INO80E-203ENST00000540562 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
INO80E-203ENST00000540562 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.77□□□□□ -1.81
INO80E-203ENST00000540562 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
INO80E-203ENST00000540562 MT4P47944 62 aa3.63□□□□□ -1.83
INO80E-203ENST00000540562 MT3P25713 68 aa3.6□□□□□ -1.83
INO80E-203ENST00000540562 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
INO80E-203ENST00000540562 KRTAP2-2Q9BYT5 123 aa3.6□□□□□ -1.83
INO80E-203ENST00000540562 KRTAP6-3Q3LI67 103 aa3.58□□□□□ -1.84
INO80E-203ENST00000540562 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
INO80E-203ENST00000540562 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
INO80E-203ENST00000540562 LCE4AQ5TA78 99 aa3.5□□□□□ -1.85
INO80E-203ENST00000540562 NEBP20929 6669 aa3.49□□□□□ -1.85
INO80E-203ENST00000540562 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
INO80E-203ENST00000540562 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.86
INO80E-203ENST00000540562 LCE1DQ5T752 114 aa3.32□□□□□ -1.88
INO80E-203ENST00000540562 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
INO80E-203ENST00000540562 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
INO80E-203ENST00000540562 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
INO80E-203ENST00000540562 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
INO80E-203ENST00000540562 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
INO80E-203ENST00000540562 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
INO80E-203ENST00000540562 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
INO80E-203ENST00000540562 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
INO80E-203ENST00000540562 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
INO80E-203ENST00000540562 KRTAP5-10Q6L8G5 202 aa2.86□□□□□ -1.95
INO80E-203ENST00000540562 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
INO80E-203ENST00000540562 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
INO80E-203ENST00000540562 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
INO80E-203ENST00000540562 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
INO80E-203ENST00000540562 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
INO80E-203ENST00000540562 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
INO80E-203ENST00000540562 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.99
INO80E-203ENST00000540562 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
INO80E-203ENST00000540562 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
INO80E-203ENST00000540562 KRTAP5-8O75690 187 aa2.55□□□□□ -2
INO80E-203ENST00000540562 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
INO80E-203ENST00000540562 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
INO80E-203ENST00000540562 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
INO80E-203ENST00000540562 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
INO80E-203ENST00000540562 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
INO80E-203ENST00000540562 PHGR1C9JFL3 82 aa2□□□□□ -2.09
INO80E-203ENST00000540562 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 69.1 ms