RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 INE1O15225 51 aa4.79□□□□□ -1.64
UBE3B-210ENST00000539599 LOC100996750A0A140TA64 210 aa4.78□□□□□ -1.64
UBE3B-210ENST00000539599 KRTAP19-6Q3LI70 58 aa4.74□□□□□ -1.65
UBE3B-210ENST00000539599 KRTAP2-3P0C7H8 128 aa4.69□□□□□ -1.66
UBE3B-210ENST00000539599 KRTAP2-4Q9BYR9 128 aa4.69□□□□□ -1.66
UBE3B-210ENST00000539599 KRTAP2-1Q9BYU5 128 aa4.69□□□□□ -1.66
UBE3B-210ENST00000539599 CRCT1Q9UGL9 99 aa4.69□□□□□ -1.66
UBE3B-210ENST00000539599 MACF1Q9UPN3 7388 aaKnown RBP4.67□□□□□ -1.66
UBE3B-210ENST00000539599 MT1GP13640 62 aa4.67□□□□□ -1.66
UBE3B-210ENST00000539599 SYNE2Q8WXH0 6885 aaKnown RBP4.61□□□□□ -1.67
UBE3B-210ENST00000539599 MT1MQ8N339 61 aa4.56□□□□□ -1.68
UBE3B-210ENST00000539599 MDN1Q9NU22 5596 aa4.54□□□□□ -1.68
UBE3B-210ENST00000539599 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
UBE3B-210ENST00000539599 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
UBE3B-210ENST00000539599 SPRR2FQ96RM1 72 aa4.49□□□□□ -1.69
UBE3B-210ENST00000539599 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
UBE3B-210ENST00000539599 LCE5AQ5TCM9 118 aa4.38□□□□□ -1.71
UBE3B-210ENST00000539599 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
UBE3B-210ENST00000539599 LCE3BQ5TA77 95 aa4.32□□□□□ -1.72
UBE3B-210ENST00000539599 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
UBE3B-210ENST00000539599 KRTAP12-4P60329 112 aa4.25□□□□□ -1.73
UBE3B-210ENST00000539599 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
UBE3B-210ENST00000539599 KRTAP9-2Q9BYQ4 174 aa4.16□□□□□ -1.74
UBE3B-210ENST00000539599 LCE1AQ5T7P2 110 aa4.13□□□□□ -1.75
UBE3B-210ENST00000539599 SPRR2EP22531 72 aa4.06□□□□□ -1.76
UBE3B-210ENST00000539599 SPRR2BP35325 72 aa4.06□□□□□ -1.76
UBE3B-210ENST00000539599 SPRR2AP35326 72 aa4.06□□□□□ -1.76
UBE3B-210ENST00000539599 MT1AP04731 61 aa4.02□□□□□ -1.77
UBE3B-210ENST00000539599 KRTAP5-9P26371 169 aa4.01□□□□□ -1.77
UBE3B-210ENST00000539599 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
UBE3B-210ENST00000539599 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
UBE3B-210ENST00000539599 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
UBE3B-210ENST00000539599 KRTAP9-6A0A140TA67 174 aa3.87□□□□□ -1.79
UBE3B-210ENST00000539599 SPRR2DP22532 72 aa3.86□□□□□ -1.79
UBE3B-210ENST00000539599 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
UBE3B-210ENST00000539599 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
UBE3B-210ENST00000539599 PRM1P04553 51 aa3.78□□□□□ -1.8
UBE3B-210ENST00000539599 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
UBE3B-210ENST00000539599 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.74□□□□□ -1.81
UBE3B-210ENST00000539599 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
UBE3B-210ENST00000539599 NEBP20929 6669 aa3.6□□□□□ -1.83
UBE3B-210ENST00000539599 MT3P25713 68 aa3.6□□□□□ -1.83
UBE3B-210ENST00000539599 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
UBE3B-210ENST00000539599 MT4P47944 62 aa3.53□□□□□ -1.84
UBE3B-210ENST00000539599 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.86
UBE3B-210ENST00000539599 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
UBE3B-210ENST00000539599 KRTAP20-2Q3LI61 65 aa3.34□□□□□ -1.88
UBE3B-210ENST00000539599 LCE4AQ5TA78 99 aa3.26□□□□□ -1.89
UBE3B-210ENST00000539599 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
UBE3B-210ENST00000539599 LCE1DQ5T752 114 aa3.25□□□□□ -1.89
UBE3B-210ENST00000539599 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
UBE3B-210ENST00000539599 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
UBE3B-210ENST00000539599 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
UBE3B-210ENST00000539599 KRTAP5-3Q6L8H2 238 aa3.14□□□□□ -1.91
UBE3B-210ENST00000539599 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
UBE3B-210ENST00000539599 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.92
UBE3B-210ENST00000539599 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
UBE3B-210ENST00000539599 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
UBE3B-210ENST00000539599 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
UBE3B-210ENST00000539599 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
UBE3B-210ENST00000539599 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
UBE3B-210ENST00000539599 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
UBE3B-210ENST00000539599 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
UBE3B-210ENST00000539599 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
UBE3B-210ENST00000539599 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
UBE3B-210ENST00000539599 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
UBE3B-210ENST00000539599 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
UBE3B-210ENST00000539599 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.99
UBE3B-210ENST00000539599 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
UBE3B-210ENST00000539599 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
UBE3B-210ENST00000539599 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
UBE3B-210ENST00000539599 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
UBE3B-210ENST00000539599 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
UBE3B-210ENST00000539599 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
UBE3B-210ENST00000539599 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
UBE3B-210ENST00000539599 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
UBE3B-210ENST00000539599 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
UBE3B-210ENST00000539599 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 79.9 ms