RNA–Protein interactions for RNA: ENST00000539276.6

ATP2A2-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-204ENST00000539276 LOC100996750A0A140TA64 210 aa5.16□□□□□ -1.58
ATP2A2-204ENST00000539276 KRTAP4-3Q9BYR4 195 aa5.16□□□□□ -1.58
ATP2A2-204ENST00000539276 FCGBPQ9Y6R7 5405 aaPredicted RBP5.13□□□□□ -1.59
ATP2A2-204ENST00000539276 KRTAP12-4P60329 112 aa5.13□□□□□ -1.59
ATP2A2-204ENST00000539276 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
ATP2A2-204ENST00000539276 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.59
ATP2A2-204ENST00000539276 KRTAP2-3P0C7H8 128 aa5.07□□□□□ -1.6
ATP2A2-204ENST00000539276 KRTAP2-4Q9BYR9 128 aa5.07□□□□□ -1.6
ATP2A2-204ENST00000539276 KRTAP2-1Q9BYU5 128 aa5.07□□□□□ -1.6
ATP2A2-204ENST00000539276 KRTAP19-3Q7Z4W3 81 aa5.03□□□□□ -1.6
ATP2A2-204ENST00000539276 MT1MQ8N339 61 aa4.97□□□□□ -1.61
ATP2A2-204ENST00000539276 KRTAP19-6Q3LI70 58 aa4.96□□□□□ -1.62
ATP2A2-204ENST00000539276 MUC12Q9UKN1 5478 aa4.94□□□□□ -1.62
ATP2A2-204ENST00000539276 SSPOA2VEC9 5147 aa4.86□□□□□ -1.63
ATP2A2-204ENST00000539276 SYNE2Q8WXH0 6885 aaKnown RBP4.8□□□□□ -1.64
ATP2A2-204ENST00000539276 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
ATP2A2-204ENST00000539276 LCE2DQ5TA82 110 aaPredicted RBP4.77□□□□□ -1.65
ATP2A2-204ENST00000539276 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
ATP2A2-204ENST00000539276 SPRR2EP22531 72 aa4.69□□□□□ -1.66
ATP2A2-204ENST00000539276 SPRR2BP35325 72 aa4.69□□□□□ -1.66
ATP2A2-204ENST00000539276 SPRR2AP35326 72 aa4.69□□□□□ -1.66
ATP2A2-204ENST00000539276 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
ATP2A2-204ENST00000539276 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
ATP2A2-204ENST00000539276 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
ATP2A2-204ENST00000539276 KRTAP6-1Q3LI64 71 aa4.54□□□□□ -1.68
ATP2A2-204ENST00000539276 PRM1P04553 51 aa4.52□□□□□ -1.69
ATP2A2-204ENST00000539276 MT1AP04731 61 aa4.49□□□□□ -1.69
ATP2A2-204ENST00000539276 SPRR2DP22532 72 aa4.48□□□□□ -1.69
ATP2A2-204ENST00000539276 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
ATP2A2-204ENST00000539276 KRTAP9-2Q9BYQ4 174 aa4.34□□□□□ -1.71
ATP2A2-204ENST00000539276 LCE1AQ5T7P2 110 aa4.32□□□□□ -1.72
ATP2A2-204ENST00000539276 MT3P25713 68 aa4.28□□□□□ -1.72
ATP2A2-204ENST00000539276 MDN1Q9NU22 5596 aa4.26□□□□□ -1.73
ATP2A2-204ENST00000539276 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.74
ATP2A2-204ENST00000539276 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
ATP2A2-204ENST00000539276 MT4P47944 62 aa4.1□□□□□ -1.75
ATP2A2-204ENST00000539276 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
ATP2A2-204ENST00000539276 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
ATP2A2-204ENST00000539276 LCE1DQ5T752 114 aa3.9□□□□□ -1.79
ATP2A2-204ENST00000539276 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
ATP2A2-204ENST00000539276 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.85□□□□□ -1.79
ATP2A2-204ENST00000539276 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.8
ATP2A2-204ENST00000539276 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
ATP2A2-204ENST00000539276 KRTAP9-6A0A140TA67 174 aa3.75□□□□□ -1.81
ATP2A2-204ENST00000539276 KRTAP4-6Q9BYQ5 205 aa3.71□□□□□ -1.82
ATP2A2-204ENST00000539276 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
ATP2A2-204ENST00000539276 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
ATP2A2-204ENST00000539276 NEBP20929 6669 aa3.49□□□□□ -1.85
ATP2A2-204ENST00000539276 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
ATP2A2-204ENST00000539276 KRTAP4-11Q9BYQ6 195 aa3.43□□□□□ -1.86
ATP2A2-204ENST00000539276 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
ATP2A2-204ENST00000539276 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
ATP2A2-204ENST00000539276 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
ATP2A2-204ENST00000539276 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
ATP2A2-204ENST00000539276 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
ATP2A2-204ENST00000539276 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
ATP2A2-204ENST00000539276 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
ATP2A2-204ENST00000539276 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.92
ATP2A2-204ENST00000539276 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
ATP2A2-204ENST00000539276 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
ATP2A2-204ENST00000539276 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
ATP2A2-204ENST00000539276 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
ATP2A2-204ENST00000539276 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
ATP2A2-204ENST00000539276 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
ATP2A2-204ENST00000539276 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.98
ATP2A2-204ENST00000539276 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
ATP2A2-204ENST00000539276 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
ATP2A2-204ENST00000539276 KRTAP9-9Q9BYP9 154 aa2.67□□□□□ -1.98
ATP2A2-204ENST00000539276 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
ATP2A2-204ENST00000539276 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
ATP2A2-204ENST00000539276 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
ATP2A2-204ENST00000539276 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
ATP2A2-204ENST00000539276 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
ATP2A2-204ENST00000539276 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
ATP2A2-204ENST00000539276 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
ATP2A2-204ENST00000539276 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
ATP2A2-204ENST00000539276 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 73.5 ms