RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
CDH20-203ENST00000538374 KRTAP4-3Q9BYR4 195 aa5.24□□□□□ -1.57
CDH20-203ENST00000538374 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
CDH20-203ENST00000538374 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
CDH20-203ENST00000538374 KRTAP2-3P0C7H8 128 aa5.18□□□□□ -1.58
CDH20-203ENST00000538374 KRTAP2-4Q9BYR9 128 aa5.18□□□□□ -1.58
CDH20-203ENST00000538374 KRTAP2-1Q9BYU5 128 aa5.18□□□□□ -1.58
CDH20-203ENST00000538374 KRTAP9-6A0A140TA67 174 aa5.13□□□□□ -1.59
CDH20-203ENST00000538374 CRCT1Q9UGL9 99 aa5.11□□□□□ -1.59
CDH20-203ENST00000538374 MT1GP13640 62 aa5.09□□□□□ -1.59
CDH20-203ENST00000538374 MACF1Q9UPN3 7388 aaKnown RBP5.06□□□□□ -1.6
CDH20-203ENST00000538374 KRTAP19-3Q7Z4W3 81 aa5.06□□□□□ -1.6
CDH20-203ENST00000538374 MT1MQ8N339 61 aa5.01□□□□□ -1.61
CDH20-203ENST00000538374 SPRR2FQ96RM1 72 aa5.01□□□□□ -1.61
CDH20-203ENST00000538374 LCE5AQ5TCM9 118 aa4.97□□□□□ -1.61
CDH20-203ENST00000538374 SYNE1Q8NF91 8797 aaKnown RBP4.97□□□□□ -1.61
CDH20-203ENST00000538374 KRTAP5-9P26371 169 aa4.94□□□□□ -1.62
CDH20-203ENST00000538374 SYNE2Q8WXH0 6885 aaKnown RBP4.93□□□□□ -1.62
CDH20-203ENST00000538374 MDN1Q9NU22 5596 aa4.88□□□□□ -1.63
CDH20-203ENST00000538374 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
CDH20-203ENST00000538374 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
CDH20-203ENST00000538374 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.75□□□□□ -1.65
CDH20-203ENST00000538374 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
CDH20-203ENST00000538374 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
CDH20-203ENST00000538374 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
CDH20-203ENST00000538374 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
CDH20-203ENST00000538374 SPRR2EP22531 72 aa4.69□□□□□ -1.66
CDH20-203ENST00000538374 SPRR2BP35325 72 aa4.69□□□□□ -1.66
CDH20-203ENST00000538374 SPRR2AP35326 72 aa4.69□□□□□ -1.66
CDH20-203ENST00000538374 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
CDH20-203ENST00000538374 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
CDH20-203ENST00000538374 KRTAP5-5Q701N2 237 aaPredicted RBP4.55□□□□□ -1.68
CDH20-203ENST00000538374 SPRR2DP22532 72 aa4.5□□□□□ -1.69
CDH20-203ENST00000538374 MT1AP04731 61 aa4.46□□□□□ -1.7
CDH20-203ENST00000538374 NEBP20929 6669 aa4.37□□□□□ -1.71
CDH20-203ENST00000538374 LCE3DQ9BYE3 92 aa4.34□□□□□ -1.71
CDH20-203ENST00000538374 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
CDH20-203ENST00000538374 KRTAP9-4Q9BYQ2 154 aa4.21□□□□□ -1.73
CDH20-203ENST00000538374 PRM1P04553 51 aa4.21□□□□□ -1.74
CDH20-203ENST00000538374 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
CDH20-203ENST00000538374 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.75
CDH20-203ENST00000538374 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
CDH20-203ENST00000538374 MT3P25713 68 aa3.98□□□□□ -1.77
CDH20-203ENST00000538374 KRTAP20-1Q3LI63 56 aa3.97□□□□□ -1.77
CDH20-203ENST00000538374 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
CDH20-203ENST00000538374 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
CDH20-203ENST00000538374 MT4P47944 62 aa3.91□□□□□ -1.78
CDH20-203ENST00000538374 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
CDH20-203ENST00000538374 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
CDH20-203ENST00000538374 LCE1DQ5T752 114 aa3.84□□□□□ -1.79
CDH20-203ENST00000538374 HMCN1Q96RW7 5635 aa3.84□□□□□ -1.79
CDH20-203ENST00000538374 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
CDH20-203ENST00000538374 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.83
CDH20-203ENST00000538374 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
CDH20-203ENST00000538374 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
CDH20-203ENST00000538374 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
CDH20-203ENST00000538374 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
CDH20-203ENST00000538374 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
CDH20-203ENST00000538374 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
CDH20-203ENST00000538374 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
CDH20-203ENST00000538374 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
CDH20-203ENST00000538374 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
CDH20-203ENST00000538374 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
CDH20-203ENST00000538374 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
CDH20-203ENST00000538374 KRTAP5-7Q6L8G8 165 aa3.17□□□□□ -1.9
CDH20-203ENST00000538374 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
CDH20-203ENST00000538374 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
CDH20-203ENST00000538374 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
CDH20-203ENST00000538374 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
CDH20-203ENST00000538374 KRTAP21-2Q3LI59 83 aa2.93□□□□□ -1.94
CDH20-203ENST00000538374 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
CDH20-203ENST00000538374 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
CDH20-203ENST00000538374 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
CDH20-203ENST00000538374 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
CDH20-203ENST00000538374 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
CDH20-203ENST00000538374 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
CDH20-203ENST00000538374 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 108.8 ms