RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 MT1MQ8N339 61 aa5.21□□□□□ -1.58
MKS1-204ENST00000537529 INE1O15225 51 aa5.18□□□□□ -1.58
MKS1-204ENST00000537529 SPRR2FQ96RM1 72 aa5.18□□□□□ -1.58
MKS1-204ENST00000537529 KRTAP9-2Q9BYQ4 174 aa5.18□□□□□ -1.58
MKS1-204ENST00000537529 KRTAP2-3P0C7H8 128 aa5.15□□□□□ -1.59
MKS1-204ENST00000537529 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.59
MKS1-204ENST00000537529 KRTAP2-4Q9BYR9 128 aa5.15□□□□□ -1.59
MKS1-204ENST00000537529 KRTAP2-1Q9BYU5 128 aa5.15□□□□□ -1.59
MKS1-204ENST00000537529 LCE5AQ5TCM9 118 aa5.11□□□□□ -1.59
MKS1-204ENST00000537529 CRCT1Q9UGL9 99 aa5.08□□□□□ -1.6
MKS1-204ENST00000537529 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
MKS1-204ENST00000537529 MUC12Q9UKN1 5478 aa5.03□□□□□ -1.6
MKS1-204ENST00000537529 KRTAP5-9P26371 169 aa4.95□□□□□ -1.62
MKS1-204ENST00000537529 MACF1Q9UPN3 7388 aaKnown RBP4.95□□□□□ -1.62
MKS1-204ENST00000537529 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
MKS1-204ENST00000537529 SPRR2EP22531 72 aa4.81□□□□□ -1.64
MKS1-204ENST00000537529 SPRR2BP35325 72 aa4.81□□□□□ -1.64
MKS1-204ENST00000537529 SPRR2AP35326 72 aa4.81□□□□□ -1.64
MKS1-204ENST00000537529 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
MKS1-204ENST00000537529 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
MKS1-204ENST00000537529 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.68□□□□□ -1.66
MKS1-204ENST00000537529 MT1AP04731 61 aa4.68□□□□□ -1.66
MKS1-204ENST00000537529 MDN1Q9NU22 5596 aa4.67□□□□□ -1.66
MKS1-204ENST00000537529 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
MKS1-204ENST00000537529 LCE3BQ5TA77 95 aa4.64□□□□□ -1.67
MKS1-204ENST00000537529 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
MKS1-204ENST00000537529 SPRR2DP22532 72 aa4.63□□□□□ -1.67
MKS1-204ENST00000537529 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
MKS1-204ENST00000537529 KRTAP9-6A0A140TA67 174 aa4.6□□□□□ -1.67
MKS1-204ENST00000537529 KRTAP12-4P60329 112 aa4.46□□□□□ -1.7
MKS1-204ENST00000537529 KRTAP4-9Q9BYQ8 210 aa4.44□□□□□ -1.7
MKS1-204ENST00000537529 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
MKS1-204ENST00000537529 LCE3DQ9BYE3 92 aa4.33□□□□□ -1.72
MKS1-204ENST00000537529 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
MKS1-204ENST00000537529 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
MKS1-204ENST00000537529 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
MKS1-204ENST00000537529 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
MKS1-204ENST00000537529 MT3P25713 68 aa4.22□□□□□ -1.73
MKS1-204ENST00000537529 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
MKS1-204ENST00000537529 NEBP20929 6669 aa4.21□□□□□ -1.74
MKS1-204ENST00000537529 LCE4AQ5TA78 99 aa4.08□□□□□ -1.76
MKS1-204ENST00000537529 MT4P47944 62 aa4.01□□□□□ -1.77
MKS1-204ENST00000537529 KRTAP4-6Q9BYQ5 205 aa4.01□□□□□ -1.77
MKS1-204ENST00000537529 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.77
MKS1-204ENST00000537529 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
MKS1-204ENST00000537529 PRM1P04553 51 aa3.91□□□□□ -1.78
MKS1-204ENST00000537529 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
MKS1-204ENST00000537529 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
MKS1-204ENST00000537529 LCE1DQ5T752 114 aa3.85□□□□□ -1.79
MKS1-204ENST00000537529 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
MKS1-204ENST00000537529 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
MKS1-204ENST00000537529 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
MKS1-204ENST00000537529 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
MKS1-204ENST00000537529 KRTAP9-9Q9BYP9 154 aa3.48□□□□□ -1.85
MKS1-204ENST00000537529 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
MKS1-204ENST00000537529 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
MKS1-204ENST00000537529 KRTAP5-10Q6L8G5 202 aa3.34□□□□□ -1.88
MKS1-204ENST00000537529 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
MKS1-204ENST00000537529 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
MKS1-204ENST00000537529 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
MKS1-204ENST00000537529 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
MKS1-204ENST00000537529 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
MKS1-204ENST00000537529 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
MKS1-204ENST00000537529 KRTAP5-7Q6L8G8 165 aa3.16□□□□□ -1.9
MKS1-204ENST00000537529 AHNAK2Q8IVF2 5795 aa3.13□□□□□ -1.91
MKS1-204ENST00000537529 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
MKS1-204ENST00000537529 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
MKS1-204ENST00000537529 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
MKS1-204ENST00000537529 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
MKS1-204ENST00000537529 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
MKS1-204ENST00000537529 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
MKS1-204ENST00000537529 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
MKS1-204ENST00000537529 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
MKS1-204ENST00000537529 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
MKS1-204ENST00000537529 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
MKS1-204ENST00000537529 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
MKS1-204ENST00000537529 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 86.5 ms