RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 MT1EP04732 61 aa5.29□□□□□ -1.56
MCF2L-232ENST00000535094 KRTAP2-3P0C7H8 128 aa5.27□□□□□ -1.57
MCF2L-232ENST00000535094 KRTAP2-4Q9BYR9 128 aa5.27□□□□□ -1.57
MCF2L-232ENST00000535094 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
MCF2L-232ENST00000535094 MUC12Q9UKN1 5478 aa5.25□□□□□ -1.57
MCF2L-232ENST00000535094 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
MCF2L-232ENST00000535094 LCE2AQ5TA79 106 aaPredicted RBP5.2□□□□□ -1.58
MCF2L-232ENST00000535094 SSPOA2VEC9 5147 aa5.12□□□□□ -1.59
MCF2L-232ENST00000535094 LCE3BQ5TA77 95 aa5.11□□□□□ -1.59
MCF2L-232ENST00000535094 SPRR2FQ96RM1 72 aa5.1□□□□□ -1.59
MCF2L-232ENST00000535094 SYNE2Q8WXH0 6885 aaKnown RBP5□□□□□ -1.61
MCF2L-232ENST00000535094 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
MCF2L-232ENST00000535094 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
MCF2L-232ENST00000535094 MT1MQ8N339 61 aa4.98□□□□□ -1.61
MCF2L-232ENST00000535094 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
MCF2L-232ENST00000535094 LCE2DQ5TA82 110 aaPredicted RBP4.9□□□□□ -1.62
MCF2L-232ENST00000535094 KRTAP19-6Q3LI70 58 aa4.86□□□□□ -1.63
MCF2L-232ENST00000535094 LCE3DQ9BYE3 92 aa4.72□□□□□ -1.65
MCF2L-232ENST00000535094 MACF1Q9UPN3 7388 aaKnown RBP4.71□□□□□ -1.66
MCF2L-232ENST00000535094 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
MCF2L-232ENST00000535094 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
MCF2L-232ENST00000535094 PRM1P04553 51 aa4.62□□□□□ -1.67
MCF2L-232ENST00000535094 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
MCF2L-232ENST00000535094 KRTAP9-7A8MTY7 169 aa4.59□□□□□ -1.67
MCF2L-232ENST00000535094 MDN1Q9NU22 5596 aa4.57□□□□□ -1.68
MCF2L-232ENST00000535094 KRTAP9-2Q9BYQ4 174 aa4.54□□□□□ -1.68
MCF2L-232ENST00000535094 SPRR2EP22531 72 aa4.54□□□□□ -1.68
MCF2L-232ENST00000535094 SPRR2BP35325 72 aa4.54□□□□□ -1.68
MCF2L-232ENST00000535094 SPRR2AP35326 72 aa4.54□□□□□ -1.68
MCF2L-232ENST00000535094 MT1AP04731 61 aa4.44□□□□□ -1.7
MCF2L-232ENST00000535094 KRTAP6-2Q3LI66 62 aa4.31□□□□□ -1.72
MCF2L-232ENST00000535094 SPRR2DP22532 72 aa4.31□□□□□ -1.72
MCF2L-232ENST00000535094 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
MCF2L-232ENST00000535094 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
MCF2L-232ENST00000535094 KRTAP9-6A0A140TA67 174 aa4.16□□□□□ -1.74
MCF2L-232ENST00000535094 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.74
MCF2L-232ENST00000535094 MT3P25713 68 aa4.14□□□□□ -1.75
MCF2L-232ENST00000535094 MT4P47944 62 aa4.02□□□□□ -1.77
MCF2L-232ENST00000535094 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
MCF2L-232ENST00000535094 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
MCF2L-232ENST00000535094 KRTAP6-3Q3LI67 103 aa3.9□□□□□ -1.78
MCF2L-232ENST00000535094 MUC19Q7Z5P9 8384 aa3.86□□□□□ -1.79
MCF2L-232ENST00000535094 LCE1DQ5T752 114 aa3.82□□□□□ -1.8
MCF2L-232ENST00000535094 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
MCF2L-232ENST00000535094 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
MCF2L-232ENST00000535094 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.74□□□□□ -1.81
MCF2L-232ENST00000535094 KRTAP4-11Q9BYQ6 195 aa3.55□□□□□ -1.84
MCF2L-232ENST00000535094 NEBP20929 6669 aa3.53□□□□□ -1.84
MCF2L-232ENST00000535094 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
MCF2L-232ENST00000535094 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
MCF2L-232ENST00000535094 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
MCF2L-232ENST00000535094 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
MCF2L-232ENST00000535094 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
MCF2L-232ENST00000535094 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
MCF2L-232ENST00000535094 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
MCF2L-232ENST00000535094 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
MCF2L-232ENST00000535094 KRTAP5-2Q701N4 177 aa3.15□□□□□ -1.91
MCF2L-232ENST00000535094 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
MCF2L-232ENST00000535094 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
MCF2L-232ENST00000535094 KRTAP5-3Q6L8H2 238 aa3.04□□□□□ -1.92
MCF2L-232ENST00000535094 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
MCF2L-232ENST00000535094 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
MCF2L-232ENST00000535094 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
MCF2L-232ENST00000535094 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
MCF2L-232ENST00000535094 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
MCF2L-232ENST00000535094 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
MCF2L-232ENST00000535094 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
MCF2L-232ENST00000535094 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
MCF2L-232ENST00000535094 KRTAP5-8O75690 187 aa2.57□□□□□ -2
MCF2L-232ENST00000535094 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
MCF2L-232ENST00000535094 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
MCF2L-232ENST00000535094 KRTAP9-9Q9BYP9 154 aa2.47□□□□□ -2.01
MCF2L-232ENST00000535094 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
MCF2L-232ENST00000535094 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
MCF2L-232ENST00000535094 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
MCF2L-232ENST00000535094 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
MCF2L-232ENST00000535094 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 17.5 ms