RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
CSDE1-215ENST00000533818 MP68P56378 58 aa2.85□□□□□ -1.95
CSDE1-215ENST00000533818 KRTAP12-1P59990 96 aa2.82□□□□□ -1.96
CSDE1-215ENST00000533818 M0R143 59 aa2.8□□□□□ -1.96
CSDE1-215ENST00000533818 ACYP2P14621 99 aa2.8□□□□□ -1.96
CSDE1-215ENST00000533818 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
CSDE1-215ENST00000533818 PYY3Q5JQD4 70 aa2.76□□□□□ -1.97
CSDE1-215ENST00000533818 CHKB-CPT1BH3BT56 60 aa2.75□□□□□ -1.97
CSDE1-215ENST00000533818 SPATA8Q6RVD6 105 aa2.75□□□□□ -1.97
CSDE1-215ENST00000533818 HIST1H4AP62805 103 aaKnown RBP2.74□□□□□ -1.97
CSDE1-215ENST00000533818 KRTAP25-1Q3LHN0 102 aa2.74□□□□□ -1.97
CSDE1-215ENST00000533818 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
CSDE1-215ENST00000533818 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
CSDE1-215ENST00000533818 LCE3CQ5T5A8 94 aa2.71□□□□□ -1.98
CSDE1-215ENST00000533818 PRAC1Q96KF2 57 aa2.71□□□□□ -1.98
CSDE1-215ENST00000533818 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
CSDE1-215ENST00000533818 H3BPC8 53 aa2.68□□□□□ -1.98
CSDE1-215ENST00000533818 OCR1Q9BZK8 76 aa2.68□□□□□ -1.98
CSDE1-215ENST00000533818 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
CSDE1-215ENST00000533818 SCGB1A1P11684 91 aa2.65□□□□□ -1.99
CSDE1-215ENST00000533818 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
CSDE1-215ENST00000533818 ATP5EP2Q5VTU8 51 aa2.59□□□□□ -1.99
CSDE1-215ENST00000533818 PRO0461Q9UI25 63 aa2.59□□□□□ -1.99
CSDE1-215ENST00000533818 KRTAP9-6A8MVA2 160 aa2.58□□□□□ -2
CSDE1-215ENST00000533818 A0A1B0GU33 70 aa2.56□□□□□ -2
CSDE1-215ENST00000533818 SEC61GP60059 68 aa2.54□□□□□ -2
CSDE1-215ENST00000533818 SERP1Q9Y6X1 66 aa2.54□□□□□ -2
CSDE1-215ENST00000533818 SMIM26A0A096LP01 95 aa2.49□□□□□ -2.01
CSDE1-215ENST00000533818 A8MU10 97 aa2.48□□□□□ -2.01
CSDE1-215ENST00000533818 ETDBQ3ZM63 59 aa2.44□□□□□ -2.02
CSDE1-215ENST00000533818 FAM240AA0A1B0GVK7 77 aa2.34□□□□□ -2.03
CSDE1-215ENST00000533818 LINC00643Q86TS7 51 aa2.34□□□□□ -2.03
CSDE1-215ENST00000533818 F8W1H4 67 aa2.33□□□□□ -2.04
CSDE1-215ENST00000533818 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
CSDE1-215ENST00000533818 SERP2Q8N6R1 65 aa2.31□□□□□ -2.04
CSDE1-215ENST00000533818 COA5Q86WW8 74 aa2.24□□□□□ -2.05
CSDE1-215ENST00000533818 GTF2H5Q6ZYL4 71 aa2.23□□□□□ -2.05
CSDE1-215ENST00000533818 SPANXA2-OT1Q8N9U9 137 aa2.23□□□□□ -2.05
CSDE1-215ENST00000533818 H7BZZ5 65 aa2.2□□□□□ -2.06
CSDE1-215ENST00000533818 SNURFQ9Y675 71 aa2.17□□□□□ -2.06
CSDE1-215ENST00000533818 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.06
CSDE1-215ENST00000533818 A0A1B0GU69 56 aa2.15□□□□□ -2.07
CSDE1-215ENST00000533818 COL5A1-AS1Q5SY13 56 aa2.15□□□□□ -2.07
CSDE1-215ENST00000533818 SMIM6P0DI80 62 aa2.1□□□□□ -2.07
CSDE1-215ENST00000533818 PCP4L1A6NKN8 68 aa2.09□□□□□ -2.07
CSDE1-215ENST00000533818 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
CSDE1-215ENST00000533818 PRR15LQ9BU68 103 aa2.07□□□□□ -2.08
CSDE1-215ENST00000533818 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
CSDE1-215ENST00000533818 SMIM20Q8N5G0 67 aa2.05□□□□□ -2.08
CSDE1-215ENST00000533818 LOC105371267A0A1B0GV96 52 aa2.04□□□□□ -2.08
CSDE1-215ENST00000533818 RPS28P62857 69 aaKnown RBP1.94□□□□□ -2.1
CSDE1-215ENST00000533818 A0A1B0GV90 55 aa1.92□□□□□ -2.1
CSDE1-215ENST00000533818 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.11
CSDE1-215ENST00000533818 K7ERU9 68 aa1.81□□□□□ -2.12
CSDE1-215ENST00000533818 K7ERS5 55 aa1.79□□□□□ -2.12
CSDE1-215ENST00000533818 J3QR89 54 aa1.78□□□□□ -2.12
CSDE1-215ENST00000533818 UQCR11O14957 56 aa1.77□□□□□ -2.13
CSDE1-215ENST00000533818 ANAPC13Q9BS18 74 aa1.73□□□□□ -2.13
CSDE1-215ENST00000533818 MIR22HGQ0VDD5 57 aa1.66□□□□□ -2.14
CSDE1-215ENST00000533818 CCDC179H3BU77 68 aa1.64□□□□□ -2.15
CSDE1-215ENST00000533818 LINC01558Q9Y6Z2 57 aa1.62□□□□□ -2.15
CSDE1-215ENST00000533818 V9GYY9 64 aa1.6□□□□□ -2.15
CSDE1-215ENST00000533818 TMEM258P61165 79 aa1.59□□□□□ -2.15
CSDE1-215ENST00000533818 CDC42SE1Q9NRR8 79 aa1.58□□□□□ -2.16
CSDE1-215ENST00000533818 COX7CP15954 63 aa1.57□□□□□ -2.16
CSDE1-215ENST00000533818 BRK1Q8WUW1 75 aa1.57□□□□□ -2.16
CSDE1-215ENST00000533818 PRO0628Q9UI54 55 aa1.57□□□□□ -2.16
CSDE1-215ENST00000533818 ATP5EP56381 51 aaPredicted RBP1.52□□□□□ -2.17
CSDE1-215ENST00000533818 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
CSDE1-215ENST00000533818 ROMO1P60602 79 aa1.5□□□□□ -2.17
CSDE1-215ENST00000533818 PMAIP1Q13794 54 aa1.5□□□□□ -2.17
CSDE1-215ENST00000533818 Q1T7F1 81 aa1.47□□□□□ -2.17
CSDE1-215ENST00000533818 PSPHP1O15172 72 aa1.46□□□□□ -2.18
CSDE1-215ENST00000533818 A6NED7 52 aa1.44□□□□□ -2.18
CSDE1-215ENST00000533818 KTN1-AS1Q86SY8 53 aa1.44□□□□□ -2.18
CSDE1-215ENST00000533818 LUZP6Q538Z0 58 aa1.2□□□□□ -2.22
CSDE1-215ENST00000533818 INE1O15225 51 aa0.98□□□□□ -2.25
CSDE1-215ENST00000533818 PRM1P04553 51 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 49.5 ms