RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 MT1LQ93083 61 aa2.08□□□□□ -2.08
UBQLN1-206ENST00000533705 KRTAP4-7Q9BYR0 210 aa2.08□□□□□ -2.08
UBQLN1-206ENST00000533705 KRTAP19-2Q3LHN2 52 aa2.08□□□□□ -2.08
UBQLN1-206ENST00000533705 LCE3EQ5T5B0 92 aa2.08□□□□□ -2.08
UBQLN1-206ENST00000533705 SSPOA2VEC9 5147 aa2.08□□□□□ -2.08
UBQLN1-206ENST00000533705 MT1EP04732 61 aa2.07□□□□□ -2.08
UBQLN1-206ENST00000533705 SPRR5A0A1B0GTR4 108 aa2.05□□□□□ -2.08
UBQLN1-206ENST00000533705 KRTAP19-6Q3LI70 58 aa2.05□□□□□ -2.08
UBQLN1-206ENST00000533705 SYNE1Q8NF91 8797 aaKnown RBP2.05□□□□□ -2.08
UBQLN1-206ENST00000533705 KRTAP9-6A0A140TA67 174 aa2.04□□□□□ -2.08
UBQLN1-206ENST00000533705 MT1MQ8N339 61 aa2.02□□□□□ -2.09
UBQLN1-206ENST00000533705 MT3P25713 68 aa2.01□□□□□ -2.09
UBQLN1-206ENST00000533705 USH2AO75445 5202 aa2□□□□□ -2.09
UBQLN1-206ENST00000533705 FSIP2Q5CZC0 6907 aa2□□□□□ -2.09
UBQLN1-206ENST00000533705 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
UBQLN1-206ENST00000533705 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
UBQLN1-206ENST00000533705 LOC100996750A0A140TA64 210 aa1.96□□□□□ -2.1
UBQLN1-206ENST00000533705 LCE1DQ5T752 114 aa1.96□□□□□ -2.1
UBQLN1-206ENST00000533705 KRTAP20-1Q3LI63 56 aa1.94□□□□□ -2.1
UBQLN1-206ENST00000533705 KRTAP9-7A8MTY7 169 aa1.93□□□□□ -2.1
UBQLN1-206ENST00000533705 SYNE2Q8WXH0 6885 aaKnown RBP1.9□□□□□ -2.11
UBQLN1-206ENST00000533705 KRTAP19-7Q3SYF9 63 aa1.89□□□□□ -2.11
UBQLN1-206ENST00000533705 MT1AP04731 61 aa1.88□□□□□ -2.11
UBQLN1-206ENST00000533705 PRM1P04553 51 aa1.87□□□□□ -2.11
UBQLN1-206ENST00000533705 FCGBPQ9Y6R7 5405 aaPredicted RBP1.86□□□□□ -2.11
UBQLN1-206ENST00000533705 LCE5AQ5TCM9 118 aa1.86□□□□□ -2.11
UBQLN1-206ENST00000533705 KRTAP6-3Q3LI67 103 aa1.86□□□□□ -2.11
UBQLN1-206ENST00000533705 KRTAP2-3P0C7H8 128 aa1.84□□□□□ -2.11
UBQLN1-206ENST00000533705 KRTAP2-4Q9BYR9 128 aa1.84□□□□□ -2.11
UBQLN1-206ENST00000533705 LCE1AQ5T7P2 110 aa1.84□□□□□ -2.12
UBQLN1-206ENST00000533705 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.83□□□□□ -2.12
UBQLN1-206ENST00000533705 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
UBQLN1-206ENST00000533705 KRTAP2-1Q9BYU5 128 aa1.82□□□□□ -2.12
UBQLN1-206ENST00000533705 KRTAP4-9Q9BYQ8 210 aa1.81□□□□□ -2.12
UBQLN1-206ENST00000533705 KRTAP2-2Q9BYT5 123 aa1.78□□□□□ -2.12
UBQLN1-206ENST00000533705 LCE4AQ5TA78 99 aa1.76□□□□□ -2.13
UBQLN1-206ENST00000533705 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
UBQLN1-206ENST00000533705 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
UBQLN1-206ENST00000533705 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
UBQLN1-206ENST00000533705 KRTAP9-4Q9BYQ2 154 aa1.73□□□□□ -2.13
UBQLN1-206ENST00000533705 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
UBQLN1-206ENST00000533705 LCE1EQ5T753 118 aa1.71□□□□□ -2.14
UBQLN1-206ENST00000533705 LCE1FQ5T754 118 aa1.71□□□□□ -2.14
UBQLN1-206ENST00000533705 KRTAP4-6Q9BYQ5 205 aa1.69□□□□□ -2.14
UBQLN1-206ENST00000533705 KRTAP9-6A8MVA2 160 aa1.67□□□□□ -2.14
UBQLN1-206ENST00000533705 KMT2DO14686 5537 aa1.66□□□□□ -2.14
UBQLN1-206ENST00000533705 DSTQ03001 7570 aaKnown RBP1.66□□□□□ -2.14
UBQLN1-206ENST00000533705 MACF1Q9UPN3 7388 aaKnown RBP1.66□□□□□ -2.14
UBQLN1-206ENST00000533705 MDN1Q9NU22 5596 aa1.65□□□□□ -2.14
UBQLN1-206ENST00000533705 KRTAP5-9P26371 169 aa1.65□□□□□ -2.15
UBQLN1-206ENST00000533705 MUC12Q9UKN1 5478 aa1.65□□□□□ -2.15
UBQLN1-206ENST00000533705 NEBP20929 6669 aa1.6□□□□□ -2.15
UBQLN1-206ENST00000533705 KRTAP9-9Q9BYP9 154 aa1.6□□□□□ -2.15
UBQLN1-206ENST00000533705 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
UBQLN1-206ENST00000533705 KRTAP20-2Q3LI61 65 aa1.46□□□□□ -2.18
UBQLN1-206ENST00000533705 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
UBQLN1-206ENST00000533705 KRTAP5-4Q6L8H1 288 aa1.43□□□□□ -2.18
UBQLN1-206ENST00000533705 KRTAP4-11Q9BYQ6 195 aa1.39□□□□□ -2.19
UBQLN1-206ENST00000533705 HMCN1Q96RW7 5635 aa1.39□□□□□ -2.19
UBQLN1-206ENST00000533705 KRTAP4-12Q9BQ66 201 aa1.38□□□□□ -2.19
UBQLN1-206ENST00000533705 KRTAP4-2Q9BYR5 136 aa1.38□□□□□ -2.19
UBQLN1-206ENST00000533705 KRTAP5-3Q6L8H2 238 aa1.37□□□□□ -2.19
UBQLN1-206ENST00000533705 KRTAP4-4Q9BYR3 166 aa1.36□□□□□ -2.19
UBQLN1-206ENST00000533705 MUC5BQ9HC84 5762 aaPredicted RBP1.35□□□□□ -2.19
UBQLN1-206ENST00000533705 KRTAP5-5Q701N2 237 aaPredicted RBP1.34□□□□□ -2.2
UBQLN1-206ENST00000533705 KRTAP5-10Q6L8G5 202 aa1.33□□□□□ -2.2
UBQLN1-206ENST00000533705 KRTAP5-7Q6L8G8 165 aa1.31□□□□□ -2.2
UBQLN1-206ENST00000533705 KRTAP5-2Q701N4 177 aa1.28□□□□□ -2.2
UBQLN1-206ENST00000533705 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.28□□□□□ -2.2
UBQLN1-206ENST00000533705 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
UBQLN1-206ENST00000533705 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
UBQLN1-206ENST00000533705 KRTAP5-8O75690 187 aa1.13□□□□□ -2.23
UBQLN1-206ENST00000533705 KRTAP5-1Q6L8H4 278 aa1.08□□□□□ -2.24
UBQLN1-206ENST00000533705 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
UBQLN1-206ENST00000533705 KRTAP5-11Q6L8G4 156 aa1□□□□□ -2.25
UBQLN1-206ENST00000533705 KRTAP21-2Q3LI59 83 aa0.86□□□□□ -2.27
UBQLN1-206ENST00000533705 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
UBQLN1-206ENST00000533705 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms