RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
PPFIA1-222ENST00000532504 MT1EP04732 61 aa5.34□□□□□ -1.55
PPFIA1-222ENST00000532504 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
PPFIA1-222ENST00000532504 MT1LQ93083 61 aa5.3□□□□□ -1.56
PPFIA1-222ENST00000532504 KRTAP12-4P60329 112 aa5.3□□□□□ -1.56
PPFIA1-222ENST00000532504 KRTAP9-7A8MTY7 169 aa5.23□□□□□ -1.57
PPFIA1-222ENST00000532504 SYNE2Q8WXH0 6885 aaKnown RBP5.2□□□□□ -1.58
PPFIA1-222ENST00000532504 MT1MQ8N339 61 aa5.16□□□□□ -1.58
PPFIA1-222ENST00000532504 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.13□□□□□ -1.59
PPFIA1-222ENST00000532504 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
PPFIA1-222ENST00000532504 MT4P47944 62 aa5.11□□□□□ -1.59
PPFIA1-222ENST00000532504 USH2AO75445 5202 aa5.09□□□□□ -1.6
PPFIA1-222ENST00000532504 KRTAP19-7Q3SYF9 63 aa5.07□□□□□ -1.6
PPFIA1-222ENST00000532504 SYNE1Q8NF91 8797 aaKnown RBP5.06□□□□□ -1.6
PPFIA1-222ENST00000532504 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
PPFIA1-222ENST00000532504 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
PPFIA1-222ENST00000532504 KRTAP20-1Q3LI63 56 aa4.97□□□□□ -1.61
PPFIA1-222ENST00000532504 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
PPFIA1-222ENST00000532504 MACF1Q9UPN3 7388 aaKnown RBP4.82□□□□□ -1.64
PPFIA1-222ENST00000532504 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
PPFIA1-222ENST00000532504 LCE1AQ5T7P2 110 aa4.82□□□□□ -1.64
PPFIA1-222ENST00000532504 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
PPFIA1-222ENST00000532504 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
PPFIA1-222ENST00000532504 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
PPFIA1-222ENST00000532504 KMT2DO14686 5537 aa4.76□□□□□ -1.65
PPFIA1-222ENST00000532504 SSPOA2VEC9 5147 aa4.76□□□□□ -1.65
PPFIA1-222ENST00000532504 MT3P25713 68 aa4.75□□□□□ -1.65
PPFIA1-222ENST00000532504 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
PPFIA1-222ENST00000532504 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
PPFIA1-222ENST00000532504 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
PPFIA1-222ENST00000532504 DSTQ03001 7570 aaKnown RBP4.68□□□□□ -1.66
PPFIA1-222ENST00000532504 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.66
PPFIA1-222ENST00000532504 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.66
PPFIA1-222ENST00000532504 MT1AP04731 61 aa4.65□□□□□ -1.67
PPFIA1-222ENST00000532504 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
PPFIA1-222ENST00000532504 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
PPFIA1-222ENST00000532504 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
PPFIA1-222ENST00000532504 MUC12Q9UKN1 5478 aa4.54□□□□□ -1.68
PPFIA1-222ENST00000532504 KRTAP6-1Q3LI64 71 aa4.5□□□□□ -1.69
PPFIA1-222ENST00000532504 NEBP20929 6669 aa4.48□□□□□ -1.69
PPFIA1-222ENST00000532504 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
PPFIA1-222ENST00000532504 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
PPFIA1-222ENST00000532504 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
PPFIA1-222ENST00000532504 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
PPFIA1-222ENST00000532504 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.71
PPFIA1-222ENST00000532504 MDN1Q9NU22 5596 aa4.32□□□□□ -1.72
PPFIA1-222ENST00000532504 PRM1P04553 51 aa4.18□□□□□ -1.74
PPFIA1-222ENST00000532504 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
PPFIA1-222ENST00000532504 KRTAP20-2Q3LI61 65 aa3.95□□□□□ -1.78
PPFIA1-222ENST00000532504 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
PPFIA1-222ENST00000532504 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
PPFIA1-222ENST00000532504 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
PPFIA1-222ENST00000532504 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
PPFIA1-222ENST00000532504 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
PPFIA1-222ENST00000532504 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
PPFIA1-222ENST00000532504 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
PPFIA1-222ENST00000532504 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
PPFIA1-222ENST00000532504 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
PPFIA1-222ENST00000532504 KRTAP5-3Q6L8H2 238 aa3.44□□□□□ -1.86
PPFIA1-222ENST00000532504 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
PPFIA1-222ENST00000532504 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
PPFIA1-222ENST00000532504 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
PPFIA1-222ENST00000532504 HMCN1Q96RW7 5635 aa3.37□□□□□ -1.87
PPFIA1-222ENST00000532504 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
PPFIA1-222ENST00000532504 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
PPFIA1-222ENST00000532504 KRTAP5-8O75690 187 aa3.15□□□□□ -1.9
PPFIA1-222ENST00000532504 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
PPFIA1-222ENST00000532504 AHNAKQ09666 5890 aaKnown RBP2.77□□□□□ -1.97
PPFIA1-222ENST00000532504 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
PPFIA1-222ENST00000532504 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
PPFIA1-222ENST00000532504 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
PPFIA1-222ENST00000532504 PHGR1C9JFL3 82 aa2.58□□□□□ -2
PPFIA1-222ENST00000532504 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
PPFIA1-222ENST00000532504 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
PPFIA1-222ENST00000532504 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
PPFIA1-222ENST00000532504 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
PPFIA1-222ENST00000532504 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
PPFIA1-222ENST00000532504 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 19.4 ms