RNA–Protein interactions for RNA: ENST00000530459.1

GMDS-207, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-207ENST00000530459 RYR3Q15413 4870 aa1.83□□□□□ -2.12
GMDS-207ENST00000530459 MT1FP04733 61 aa1.83□□□□□ -2.12
GMDS-207ENST00000530459 MT1HP80294 61 aa1.81□□□□□ -2.12
GMDS-207ENST00000530459 KIAA1109Q2LD37 5005 aa1.81□□□□□ -2.12
GMDS-207ENST00000530459 KRTAP10-7P60409 375 aaPredicted RBP1.8□□□□□ -2.12
GMDS-207ENST00000530459 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
GMDS-207ENST00000530459 KRTAP5-4Q6L8H1 288 aa1.78□□□□□ -2.12
GMDS-207ENST00000530459 KRTAP9-6A8MVA2 160 aa1.77□□□□□ -2.13
GMDS-207ENST00000530459 M0R2T5 61 aa1.77□□□□□ -2.13
GMDS-207ENST00000530459 LCE3EQ5T5B0 92 aa1.77□□□□□ -2.13
GMDS-207ENST00000530459 KRTAP5-1Q6L8H4 278 aa1.77□□□□□ -2.13
GMDS-207ENST00000530459 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
GMDS-207ENST00000530459 ABCA13Q86UQ4 5058 aa1.76□□□□□ -2.13
GMDS-207ENST00000530459 BIRC6Q9NR09 4857 aa1.75□□□□□ -2.13
GMDS-207ENST00000530459 HMCN2Q8NDA2 5059 aa1.71□□□□□ -2.14
GMDS-207ENST00000530459 HERC2O95714 4834 aa1.7□□□□□ -2.14
GMDS-207ENST00000530459 KRTAP19-7Q3SYF9 63 aa1.68□□□□□ -2.14
GMDS-207ENST00000530459 PCLOQ9Y6V0 5065 aa1.66□□□□□ -2.14
GMDS-207ENST00000530459 LCE1EQ5T753 118 aa1.66□□□□□ -2.14
GMDS-207ENST00000530459 MT1EP04732 61 aa1.65□□□□□ -2.15
GMDS-207ENST00000530459 MT1LQ93083 61 aa1.65□□□□□ -2.15
GMDS-207ENST00000530459 KRTAP5-2Q701N4 177 aa1.63□□□□□ -2.15
GMDS-207ENST00000530459 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
GMDS-207ENST00000530459 EPPK1P58107 5090 aaKnown RBP1.61□□□□□ -2.15
GMDS-207ENST00000530459 MUC2Q02817 5179 aa1.6□□□□□ -2.15
GMDS-207ENST00000530459 UBR4Q5T4S7 5183 aa1.58□□□□□ -2.16
GMDS-207ENST00000530459 LCE3DQ9BYE3 92 aa1.57□□□□□ -2.16
GMDS-207ENST00000530459 MT1AP04731 61 aa1.56□□□□□ -2.16
GMDS-207ENST00000530459 MT1GP13640 62 aa1.51□□□□□ -2.17
GMDS-207ENST00000530459 FAT4Q6V0I7 4981 aa1.5□□□□□ -2.17
GMDS-207ENST00000530459 MT1MQ8N339 61 aa1.5□□□□□ -2.17
GMDS-207ENST00000530459 OBSCNQ5VST9 7968 aa1.49□□□□□ -2.17
GMDS-207ENST00000530459 KRTAP5-5Q701N2 237 aaPredicted RBP1.47□□□□□ -2.17
GMDS-207ENST00000530459 KRTAP19-3Q7Z4W3 81 aa1.47□□□□□ -2.17
GMDS-207ENST00000530459 RNF213Q63HN8 5207 aa1.47□□□□□ -2.17
GMDS-207ENST00000530459 KRTAP4-3Q9BYR4 195 aa1.46□□□□□ -2.18
GMDS-207ENST00000530459 KRTAP6-3Q3LI67 103 aa1.45□□□□□ -2.18
GMDS-207ENST00000530459 PRM1P04553 51 aa1.44□□□□□ -2.18
GMDS-207ENST00000530459 KRTAP19-6Q3LI70 58 aa1.43□□□□□ -2.18
GMDS-207ENST00000530459 KRTAP5-8O75690 187 aa1.4□□□□□ -2.19
GMDS-207ENST00000530459 SPRR2FQ96RM1 72 aa1.39□□□□□ -2.19
GMDS-207ENST00000530459 KRTAP6-1Q3LI64 71 aa1.37□□□□□ -2.19
GMDS-207ENST00000530459 CRCT1Q9UGL9 99 aa1.37□□□□□ -2.19
GMDS-207ENST00000530459 KRTAP6-2Q3LI66 62 aa1.35□□□□□ -2.19
GMDS-207ENST00000530459 KMT2DO14686 5537 aa1.35□□□□□ -2.19
GMDS-207ENST00000530459 HMCN1Q96RW7 5635 aa1.32□□□□□ -2.2
GMDS-207ENST00000530459 SPRR2AP35326 72 aa1.32□□□□□ -2.2
GMDS-207ENST00000530459 SSPOA2VEC9 5147 aa1.32□□□□□ -2.2
GMDS-207ENST00000530459 USH2AO75445 5202 aa1.31□□□□□ -2.2
GMDS-207ENST00000530459 SYNE1Q8NF91 8797 aaKnown RBP1.28□□□□□ -2.2
GMDS-207ENST00000530459 SPRR2EP22531 72 aa1.27□□□□□ -2.21
GMDS-207ENST00000530459 SPRR2BP35325 72 aa1.26□□□□□ -2.21
GMDS-207ENST00000530459 SPRR2DP22532 72 aa1.2□□□□□ -2.22
GMDS-207ENST00000530459 FCGBPQ9Y6R7 5405 aaPredicted RBP1.16□□□□□ -2.22
GMDS-207ENST00000530459 LCE1CQ5T751 118 aa1.14□□□□□ -2.23
GMDS-207ENST00000530459 LCE1BQ5T7P3 118 aa1.14□□□□□ -2.23
GMDS-207ENST00000530459 MUC12Q9UKN1 5478 aa1.13□□□□□ -2.23
GMDS-207ENST00000530459 KRTAP5-10Q6L8G5 202 aa1.06□□□□□ -2.24
GMDS-207ENST00000530459 DSTQ03001 7570 aaKnown RBP1.04□□□□□ -2.24
GMDS-207ENST00000530459 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
GMDS-207ENST00000530459 MDN1Q9NU22 5596 aa0.99□□□□□ -2.25
GMDS-207ENST00000530459 KRTAP20-2Q3LI61 65 aa0.97□□□□□ -2.25
GMDS-207ENST00000530459 KRTAP5-7Q6L8G8 165 aa0.97□□□□□ -2.25
GMDS-207ENST00000530459 FSIP2Q5CZC0 6907 aa0.94□□□□□ -2.26
GMDS-207ENST00000530459 MUC5ACP98088 5654 aa0.93□□□□□ -2.26
GMDS-207ENST00000530459 NEBP20929 6669 aa0.91□□□□□ -2.26
GMDS-207ENST00000530459 SYNE2Q8WXH0 6885 aaKnown RBP0.91□□□□□ -2.26
GMDS-207ENST00000530459 KRTAP21-2Q3LI59 83 aa0.91□□□□□ -2.26
GMDS-207ENST00000530459 MUC19Q7Z5P9 8384 aa0.9□□□□□ -2.26
GMDS-207ENST00000530459 KRTAP20-1Q3LI63 56 aa0.89□□□□□ -2.27
GMDS-207ENST00000530459 MACF1Q9UPN3 7388 aaKnown RBP0.89□□□□□ -2.27
GMDS-207ENST00000530459 MT4P47944 62 aa0.87□□□□□ -2.27
GMDS-207ENST00000530459 GPR98Q8WXG9 6306 aa0.77□□□□□ -2.29
GMDS-207ENST00000530459 MUC5BQ9HC84 5762 aaPredicted RBP0.7□□□□□ -2.3
GMDS-207ENST00000530459 PHGR1C9JFL3 82 aa0.67□□□□□ -2.3
GMDS-207ENST00000530459 AHNAK2Q8IVF2 5795 aa0.67□□□□□ -2.3
GMDS-207ENST00000530459 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
GMDS-207ENST00000530459 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 56.7 ms