RNA–Protein interactions for RNA: ENST00000530262.5

MACF1-229, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 6,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-229ENST00000530262 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
MACF1-229ENST00000530262 KRTAP9-6A0A140TA67 174 aa2.47□□□□□ -2.01
MACF1-229ENST00000530262 KRTAP19-6Q3LI70 58 aa2.43□□□□□ -2.02
MACF1-229ENST00000530262 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
MACF1-229ENST00000530262 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
MACF1-229ENST00000530262 KRTAP19-3Q7Z4W3 81 aa2.38□□□□□ -2.03
MACF1-229ENST00000530262 KRTAP4-7Q9BYR0 210 aa2.38□□□□□ -2.03
MACF1-229ENST00000530262 MT1LQ93083 61 aa2.37□□□□□ -2.03
MACF1-229ENST00000530262 MT1EP04732 61 aa2.34□□□□□ -2.04
MACF1-229ENST00000530262 KRTAP9-7A8MTY7 169 aa2.3□□□□□ -2.04
MACF1-229ENST00000530262 KRTAP4-3Q9BYR4 195 aa2.29□□□□□ -2.04
MACF1-229ENST00000530262 MT4P47944 62 aa2.28□□□□□ -2.04
MACF1-229ENST00000530262 MT1MQ8N339 61 aa2.27□□□□□ -2.05
MACF1-229ENST00000530262 SYNE2Q8WXH0 6885 aaKnown RBP2.26□□□□□ -2.05
MACF1-229ENST00000530262 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.26□□□□□ -2.05
MACF1-229ENST00000530262 MT3P25713 68 aa2.26□□□□□ -2.05
MACF1-229ENST00000530262 LOC100996750A0A140TA64 210 aa2.25□□□□□ -2.05
MACF1-229ENST00000530262 KRTAP19-7Q3SYF9 63 aa2.21□□□□□ -2.05
MACF1-229ENST00000530262 USH2AO75445 5202 aa2.2□□□□□ -2.06
MACF1-229ENST00000530262 PRM1P04553 51 aa2.2□□□□□ -2.06
MACF1-229ENST00000530262 KRTAP20-1Q3LI63 56 aa2.19□□□□□ -2.06
MACF1-229ENST00000530262 KRTAP6-3Q3LI67 103 aa2.19□□□□□ -2.06
MACF1-229ENST00000530262 MT1AP04731 61 aa2.14□□□□□ -2.07
MACF1-229ENST00000530262 KMT2DO14686 5537 aa2.13□□□□□ -2.07
MACF1-229ENST00000530262 MACF1Q9UPN3 7388 aaKnown RBP2.13□□□□□ -2.07
MACF1-229ENST00000530262 KRTAP2-3P0C7H8 128 aa2.11□□□□□ -2.07
MACF1-229ENST00000530262 KRTAP2-4Q9BYR9 128 aa2.11□□□□□ -2.07
MACF1-229ENST00000530262 KRTAP2-1Q9BYU5 128 aa2.11□□□□□ -2.07
MACF1-229ENST00000530262 LCE1AQ5T7P2 110 aa2.11□□□□□ -2.07
MACF1-229ENST00000530262 KRTAP4-9Q9BYQ8 210 aa2.1□□□□□ -2.07
MACF1-229ENST00000530262 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.08
MACF1-229ENST00000530262 LCE1DQ5T752 114 aa2.08□□□□□ -2.08
MACF1-229ENST00000530262 FCGBPQ9Y6R7 5405 aaPredicted RBP2.06□□□□□ -2.08
MACF1-229ENST00000530262 LCE5AQ5TCM9 118 aa2.05□□□□□ -2.08
MACF1-229ENST00000530262 SSPOA2VEC9 5147 aa2.05□□□□□ -2.08
MACF1-229ENST00000530262 KRTAP2-2Q9BYT5 123 aa2.02□□□□□ -2.09
MACF1-229ENST00000530262 DSTQ03001 7570 aaKnown RBP2□□□□□ -2.09
MACF1-229ENST00000530262 OBSCNQ5VST9 7968 aa2□□□□□ -2.09
MACF1-229ENST00000530262 KRTAP6-1Q3LI64 71 aa1.98□□□□□ -2.09
MACF1-229ENST00000530262 KRTAP9-4Q9BYQ2 154 aa1.98□□□□□ -2.09
MACF1-229ENST00000530262 KRTAP9-6A8MVA2 160 aa1.97□□□□□ -2.09
MACF1-229ENST00000530262 MUC12Q9UKN1 5478 aa1.96□□□□□ -2.1
MACF1-229ENST00000530262 LCE4AQ5TA78 99 aa1.95□□□□□ -2.1
MACF1-229ENST00000530262 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
MACF1-229ENST00000530262 KRTAP5-9P26371 169 aa1.93□□□□□ -2.1
MACF1-229ENST00000530262 NEBP20929 6669 aa1.92□□□□□ -2.1
MACF1-229ENST00000530262 GPR98Q8WXG9 6306 aa1.86□□□□□ -2.11
MACF1-229ENST00000530262 KRTAP4-6Q9BYQ5 205 aa1.83□□□□□ -2.12
MACF1-229ENST00000530262 MDN1Q9NU22 5596 aa1.81□□□□□ -2.12
MACF1-229ENST00000530262 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
MACF1-229ENST00000530262 LCE1EQ5T753 118 aa1.78□□□□□ -2.12
MACF1-229ENST00000530262 LCE1FQ5T754 118 aa1.78□□□□□ -2.12
MACF1-229ENST00000530262 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
MACF1-229ENST00000530262 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
MACF1-229ENST00000530262 KRTAP9-9Q9BYP9 154 aa1.67□□□□□ -2.14
MACF1-229ENST00000530262 KRTAP5-4Q6L8H1 288 aa1.62□□□□□ -2.15
MACF1-229ENST00000530262 KRTAP4-11Q9BYQ6 195 aa1.59□□□□□ -2.16
MACF1-229ENST00000530262 KRTAP5-5Q701N2 237 aaPredicted RBP1.58□□□□□ -2.16
MACF1-229ENST00000530262 AHNAK2Q8IVF2 5795 aa1.57□□□□□ -2.16
MACF1-229ENST00000530262 KRTAP4-12Q9BQ66 201 aa1.52□□□□□ -2.17
MACF1-229ENST00000530262 KRTAP4-2Q9BYR5 136 aa1.52□□□□□ -2.17
MACF1-229ENST00000530262 KRTAP5-3Q6L8H2 238 aa1.5□□□□□ -2.17
MACF1-229ENST00000530262 KRTAP4-4Q9BYR3 166 aa1.48□□□□□ -2.17
MACF1-229ENST00000530262 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
MACF1-229ENST00000530262 MUC5ACP98088 5654 aa1.44□□□□□ -2.18
MACF1-229ENST00000530262 KRTAP5-8O75690 187 aa1.39□□□□□ -2.19
MACF1-229ENST00000530262 KRTAP5-2Q701N4 177 aa1.33□□□□□ -2.2
MACF1-229ENST00000530262 AHNAKQ09666 5890 aaKnown RBP1.25□□□□□ -2.21
MACF1-229ENST00000530262 KRTAP5-10Q6L8G5 202 aa1.21□□□□□ -2.22
MACF1-229ENST00000530262 KRTAP5-1Q6L8H4 278 aa1.2□□□□□ -2.22
MACF1-229ENST00000530262 MUC5BQ9HC84 5762 aaPredicted RBP1.14□□□□□ -2.23
MACF1-229ENST00000530262 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
MACF1-229ENST00000530262 KRTAP5-7Q6L8G8 165 aa1.12□□□□□ -2.23
MACF1-229ENST00000530262 KRTAP5-11Q6L8G4 156 aa1.1□□□□□ -2.23
MACF1-229ENST00000530262 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.08□□□□□ -2.24
MACF1-229ENST00000530262 KRTAP21-2Q3LI59 83 aa1.06□□□□□ -2.24
MACF1-229ENST00000530262 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
MACF1-229ENST00000530262 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 87.3 ms