RNA–Protein interactions for RNA: ENST00000528948.1

CAPRIN1-206, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-206ENST00000528948 KRTAP19-8Q3LI54 63 aa3.47□□□□□ -1.85
CAPRIN1-206ENST00000528948 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
CAPRIN1-206ENST00000528948 RYR3Q15413 4870 aa3.35□□□□□ -1.87
CAPRIN1-206ENST00000528948 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
CAPRIN1-206ENST00000528948 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.87
CAPRIN1-206ENST00000528948 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.87
CAPRIN1-206ENST00000528948 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.87
CAPRIN1-206ENST00000528948 M0R2T5 61 aa3.32□□□□□ -1.88
CAPRIN1-206ENST00000528948 MT1XP80297 61 aa3.32□□□□□ -1.88
CAPRIN1-206ENST00000528948 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
CAPRIN1-206ENST00000528948 MT2AP02795 61 aa3.25□□□□□ -1.89
CAPRIN1-206ENST00000528948 MT1BP07438 61 aa3.25□□□□□ -1.89
CAPRIN1-206ENST00000528948 MT1FP04733 61 aa3.22□□□□□ -1.89
CAPRIN1-206ENST00000528948 KIAA1109Q2LD37 5005 aa3.2□□□□□ -1.9
CAPRIN1-206ENST00000528948 MT1HP80294 61 aa3.2□□□□□ -1.9
CAPRIN1-206ENST00000528948 BIRC6Q9NR09 4857 aa3.19□□□□□ -1.9
CAPRIN1-206ENST00000528948 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
CAPRIN1-206ENST00000528948 ABCA13Q86UQ4 5058 aa3.16□□□□□ -1.9
CAPRIN1-206ENST00000528948 HERC2O95714 4834 aa3.13□□□□□ -1.91
CAPRIN1-206ENST00000528948 HMCN2Q8NDA2 5059 aa3.08□□□□□ -1.92
CAPRIN1-206ENST00000528948 MT1EP04732 61 aa3□□□□□ -1.93
CAPRIN1-206ENST00000528948 PCLOQ9Y6V0 5065 aa2.98□□□□□ -1.93
CAPRIN1-206ENST00000528948 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
CAPRIN1-206ENST00000528948 MT1LQ93083 61 aa2.97□□□□□ -1.93
CAPRIN1-206ENST00000528948 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
CAPRIN1-206ENST00000528948 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
CAPRIN1-206ENST00000528948 UBR4Q5T4S7 5183 aa2.87□□□□□ -1.95
CAPRIN1-206ENST00000528948 MUC2Q02817 5179 aa2.87□□□□□ -1.95
CAPRIN1-206ENST00000528948 MT1AP04731 61 aa2.86□□□□□ -1.95
CAPRIN1-206ENST00000528948 EPPK1P58107 5090 aaKnown RBP2.85□□□□□ -1.95
CAPRIN1-206ENST00000528948 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
CAPRIN1-206ENST00000528948 MT1GP13640 62 aa2.75□□□□□ -1.97
CAPRIN1-206ENST00000528948 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
CAPRIN1-206ENST00000528948 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
CAPRIN1-206ENST00000528948 FAT4Q6V0I7 4981 aa2.72□□□□□ -1.97
CAPRIN1-206ENST00000528948 RNF213Q63HN8 5207 aa2.7□□□□□ -1.98
CAPRIN1-206ENST00000528948 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
CAPRIN1-206ENST00000528948 KRTAP19-3Q7Z4W3 81 aa2.67□□□□□ -1.98
CAPRIN1-206ENST00000528948 MT1MQ8N339 61 aa2.67□□□□□ -1.98
CAPRIN1-206ENST00000528948 PRM1P04553 51 aa2.64□□□□□ -1.99
CAPRIN1-206ENST00000528948 KRTAP6-3Q3LI67 103 aa2.57□□□□□ -2
CAPRIN1-206ENST00000528948 SPRR2FQ96RM1 72 aa2.57□□□□□ -2
CAPRIN1-206ENST00000528948 KRTAP19-6Q3LI70 58 aa2.55□□□□□ -2
CAPRIN1-206ENST00000528948 SPRR2AP35326 72 aa2.49□□□□□ -2.01
CAPRIN1-206ENST00000528948 CRCT1Q9UGL9 99 aa2.49□□□□□ -2.01
CAPRIN1-206ENST00000528948 KRTAP6-2Q3LI66 62 aa2.44□□□□□ -2.02
CAPRIN1-206ENST00000528948 KMT2DO14686 5537 aa2.42□□□□□ -2.02
CAPRIN1-206ENST00000528948 KRTAP6-1Q3LI64 71 aa2.41□□□□□ -2.02
CAPRIN1-206ENST00000528948 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.03
CAPRIN1-206ENST00000528948 SPRR2BP35325 72 aa2.39□□□□□ -2.03
CAPRIN1-206ENST00000528948 USH2AO75445 5202 aa2.38□□□□□ -2.03
CAPRIN1-206ENST00000528948 SSPOA2VEC9 5147 aa2.38□□□□□ -2.03
CAPRIN1-206ENST00000528948 SPRR2EP22531 72 aa2.36□□□□□ -2.03
CAPRIN1-206ENST00000528948 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
CAPRIN1-206ENST00000528948 SPRR2DP22532 72 aa2.27□□□□□ -2.05
CAPRIN1-206ENST00000528948 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
CAPRIN1-206ENST00000528948 FSIP2Q5CZC0 6907 aa2.11□□□□□ -2.07
CAPRIN1-206ENST00000528948 FCGBPQ9Y6R7 5405 aaPredicted RBP2.07□□□□□ -2.08
CAPRIN1-206ENST00000528948 MUC12Q9UKN1 5478 aa2.06□□□□□ -2.08
CAPRIN1-206ENST00000528948 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
CAPRIN1-206ENST00000528948 DSTQ03001 7570 aaKnown RBP1.91□□□□□ -2.1
CAPRIN1-206ENST00000528948 MDN1Q9NU22 5596 aa1.88□□□□□ -2.11
CAPRIN1-206ENST00000528948 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
CAPRIN1-206ENST00000528948 SYNE2Q8WXH0 6885 aaKnown RBP1.85□□□□□ -2.11
CAPRIN1-206ENST00000528948 MACF1Q9UPN3 7388 aaKnown RBP1.83□□□□□ -2.12
CAPRIN1-206ENST00000528948 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
CAPRIN1-206ENST00000528948 KRTAP20-1Q3LI63 56 aa1.78□□□□□ -2.12
CAPRIN1-206ENST00000528948 NEBP20929 6669 aa1.78□□□□□ -2.13
CAPRIN1-206ENST00000528948 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
CAPRIN1-206ENST00000528948 KRTAP20-2Q3LI61 65 aa1.72□□□□□ -2.13
CAPRIN1-206ENST00000528948 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
CAPRIN1-206ENST00000528948 GPR98Q8WXG9 6306 aa1.65□□□□□ -2.15
CAPRIN1-206ENST00000528948 MT4P47944 62 aa1.55□□□□□ -2.16
CAPRIN1-206ENST00000528948 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
CAPRIN1-206ENST00000528948 MUC5BQ9HC84 5762 aaPredicted RBP1.37□□□□□ -2.19
CAPRIN1-206ENST00000528948 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
CAPRIN1-206ENST00000528948 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
CAPRIN1-206ENST00000528948 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 72.9 ms