RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 KRTAP2-4Q9BYR9 128 aa6.1□□□□□ -1.43
LTBP3-210ENST00000528516 KRTAP2-1Q9BYU5 128 aa6.1□□□□□ -1.43
LTBP3-210ENST00000528516 SSPOA2VEC9 5147 aa6.09□□□□□ -1.44
LTBP3-210ENST00000528516 SYNE2Q8WXH0 6885 aaKnown RBP6.04□□□□□ -1.44
LTBP3-210ENST00000528516 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
LTBP3-210ENST00000528516 KRTAP4-3Q9BYR4 195 aa6□□□□□ -1.45
LTBP3-210ENST00000528516 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
LTBP3-210ENST00000528516 KRTAP12-4P60329 112 aa5.93□□□□□ -1.46
LTBP3-210ENST00000528516 MUC12Q9UKN1 5478 aa5.9□□□□□ -1.47
LTBP3-210ENST00000528516 KRTAP19-6Q3LI70 58 aa5.88□□□□□ -1.47
LTBP3-210ENST00000528516 MT1LQ93083 61 aa5.88□□□□□ -1.47
LTBP3-210ENST00000528516 KRTAP19-7Q3SYF9 63 aa5.85□□□□□ -1.47
LTBP3-210ENST00000528516 MT1EP04732 61 aa5.83□□□□□ -1.48
LTBP3-210ENST00000528516 LCE2DQ5TA82 110 aaPredicted RBP5.77□□□□□ -1.49
LTBP3-210ENST00000528516 KRTAP9-2Q9BYQ4 174 aa5.77□□□□□ -1.49
LTBP3-210ENST00000528516 MACF1Q9UPN3 7388 aaKnown RBP5.67□□□□□ -1.5
LTBP3-210ENST00000528516 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
LTBP3-210ENST00000528516 SPRR2EP22531 72 aa5.65□□□□□ -1.51
LTBP3-210ENST00000528516 SPRR2BP35325 72 aa5.65□□□□□ -1.51
LTBP3-210ENST00000528516 SPRR2AP35326 72 aa5.65□□□□□ -1.51
LTBP3-210ENST00000528516 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
LTBP3-210ENST00000528516 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
LTBP3-210ENST00000528516 MT1MQ8N339 61 aa5.57□□□□□ -1.52
LTBP3-210ENST00000528516 LCE3DQ9BYE3 92 aa5.46□□□□□ -1.54
LTBP3-210ENST00000528516 SPRR2DP22532 72 aa5.37□□□□□ -1.55
LTBP3-210ENST00000528516 LCE3EQ5T5B0 92 aa5.32□□□□□ -1.56
LTBP3-210ENST00000528516 PRM1P04553 51 aa5.31□□□□□ -1.56
LTBP3-210ENST00000528516 MDN1Q9NU22 5596 aa5.3□□□□□ -1.56
LTBP3-210ENST00000528516 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
LTBP3-210ENST00000528516 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
LTBP3-210ENST00000528516 KRTAP9-6A0A140TA67 174 aa5.18□□□□□ -1.58
LTBP3-210ENST00000528516 LCE1AQ5T7P2 110 aa5.12□□□□□ -1.59
LTBP3-210ENST00000528516 KRTAP6-1Q3LI64 71 aa5.11□□□□□ -1.59
LTBP3-210ENST00000528516 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.11□□□□□ -1.59
LTBP3-210ENST00000528516 MT4P47944 62 aa5.09□□□□□ -1.59
LTBP3-210ENST00000528516 MT1AP04731 61 aa5□□□□□ -1.61
LTBP3-210ENST00000528516 KRTAP5-9P26371 169 aa4.99□□□□□ -1.61
LTBP3-210ENST00000528516 MUC19Q7Z5P9 8384 aa4.98□□□□□ -1.61
LTBP3-210ENST00000528516 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
LTBP3-210ENST00000528516 KRTAP6-3Q3LI67 103 aa4.92□□□□□ -1.62
LTBP3-210ENST00000528516 MT3P25713 68 aa4.9□□□□□ -1.63
LTBP3-210ENST00000528516 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
LTBP3-210ENST00000528516 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
LTBP3-210ENST00000528516 LCE1BQ5T7P3 118 aa4.79□□□□□ -1.64
LTBP3-210ENST00000528516 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
LTBP3-210ENST00000528516 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
LTBP3-210ENST00000528516 NEBP20929 6669 aa4.59□□□□□ -1.67
LTBP3-210ENST00000528516 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
LTBP3-210ENST00000528516 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
LTBP3-210ENST00000528516 KRTAP20-1Q3LI63 56 aa4.29□□□□□ -1.72
LTBP3-210ENST00000528516 MUC5ACP98088 5654 aa4.22□□□□□ -1.73
LTBP3-210ENST00000528516 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
LTBP3-210ENST00000528516 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.74
LTBP3-210ENST00000528516 KRTAP20-2Q3LI61 65 aa4.13□□□□□ -1.75
LTBP3-210ENST00000528516 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
LTBP3-210ENST00000528516 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
LTBP3-210ENST00000528516 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.79
LTBP3-210ENST00000528516 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
LTBP3-210ENST00000528516 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
LTBP3-210ENST00000528516 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
LTBP3-210ENST00000528516 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
LTBP3-210ENST00000528516 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
LTBP3-210ENST00000528516 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.83
LTBP3-210ENST00000528516 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
LTBP3-210ENST00000528516 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
LTBP3-210ENST00000528516 AHNAK2Q8IVF2 5795 aa3.41□□□□□ -1.86
LTBP3-210ENST00000528516 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
LTBP3-210ENST00000528516 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
LTBP3-210ENST00000528516 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
LTBP3-210ENST00000528516 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
LTBP3-210ENST00000528516 KRTAP21-1Q3LI58 79 aa3.1□□□□□ -1.91
LTBP3-210ENST00000528516 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
LTBP3-210ENST00000528516 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
LTBP3-210ENST00000528516 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
LTBP3-210ENST00000528516 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
LTBP3-210ENST00000528516 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
LTBP3-210ENST00000528516 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
LTBP3-210ENST00000528516 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 83.8 ms