RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SPRR5A0A1B0GTR4 108 aa5.1□□□□□ -1.59
USP47-207ENST00000527733 USH2AO75445 5202 aa5.03□□□□□ -1.6
USP47-207ENST00000527733 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
USP47-207ENST00000527733 KRTAP9-6A0A140TA67 174 aa4.98□□□□□ -1.61
USP47-207ENST00000527733 KRTAP19-7Q3SYF9 63 aa4.95□□□□□ -1.62
USP47-207ENST00000527733 MT1MQ8N339 61 aa4.94□□□□□ -1.62
USP47-207ENST00000527733 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
USP47-207ENST00000527733 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
USP47-207ENST00000527733 KMT2DO14686 5537 aa4.81□□□□□ -1.64
USP47-207ENST00000527733 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
USP47-207ENST00000527733 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
USP47-207ENST00000527733 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
USP47-207ENST00000527733 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
USP47-207ENST00000527733 DSTQ03001 7570 aaKnown RBP4.68□□□□□ -1.66
USP47-207ENST00000527733 KRTAP9-7A8MTY7 169 aa4.66□□□□□ -1.66
USP47-207ENST00000527733 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
USP47-207ENST00000527733 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
USP47-207ENST00000527733 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
USP47-207ENST00000527733 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
USP47-207ENST00000527733 SYNE2Q8WXH0 6885 aaKnown RBP4.59□□□□□ -1.68
USP47-207ENST00000527733 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
USP47-207ENST00000527733 MT4P47944 62 aa4.55□□□□□ -1.68
USP47-207ENST00000527733 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
USP47-207ENST00000527733 MT3P25713 68 aa4.53□□□□□ -1.68
USP47-207ENST00000527733 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
USP47-207ENST00000527733 MT1AP04731 61 aa4.51□□□□□ -1.69
USP47-207ENST00000527733 SSPOA2VEC9 5147 aa4.51□□□□□ -1.69
USP47-207ENST00000527733 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
USP47-207ENST00000527733 KRTAP20-1Q3LI63 56 aa4.43□□□□□ -1.7
USP47-207ENST00000527733 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
USP47-207ENST00000527733 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.7
USP47-207ENST00000527733 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
USP47-207ENST00000527733 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
USP47-207ENST00000527733 KRTAP2-1Q9BYU5 128 aa4.37□□□□□ -1.71
USP47-207ENST00000527733 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
USP47-207ENST00000527733 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
USP47-207ENST00000527733 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
USP47-207ENST00000527733 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
USP47-207ENST00000527733 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
USP47-207ENST00000527733 KRTAP9-4Q9BYQ2 154 aa4.18□□□□□ -1.74
USP47-207ENST00000527733 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
USP47-207ENST00000527733 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
USP47-207ENST00000527733 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.76
USP47-207ENST00000527733 NEBP20929 6669 aa4.07□□□□□ -1.76
USP47-207ENST00000527733 MDN1Q9NU22 5596 aa4.04□□□□□ -1.76
USP47-207ENST00000527733 PRM1P04553 51 aa4.01□□□□□ -1.77
USP47-207ENST00000527733 KRTAP4-6Q9BYQ5 205 aa3.78□□□□□ -1.8
USP47-207ENST00000527733 KRTAP20-2Q3LI61 65 aa3.73□□□□□ -1.81
USP47-207ENST00000527733 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
USP47-207ENST00000527733 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
USP47-207ENST00000527733 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
USP47-207ENST00000527733 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
USP47-207ENST00000527733 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.88
USP47-207ENST00000527733 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
USP47-207ENST00000527733 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
USP47-207ENST00000527733 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
USP47-207ENST00000527733 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
USP47-207ENST00000527733 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
USP47-207ENST00000527733 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
USP47-207ENST00000527733 MUC5ACP98088 5654 aa3.15□□□□□ -1.9
USP47-207ENST00000527733 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
USP47-207ENST00000527733 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
USP47-207ENST00000527733 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
USP47-207ENST00000527733 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
USP47-207ENST00000527733 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
USP47-207ENST00000527733 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
USP47-207ENST00000527733 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
USP47-207ENST00000527733 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.99
USP47-207ENST00000527733 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
USP47-207ENST00000527733 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
USP47-207ENST00000527733 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
USP47-207ENST00000527733 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
USP47-207ENST00000527733 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
USP47-207ENST00000527733 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
USP47-207ENST00000527733 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
USP47-207ENST00000527733 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
USP47-207ENST00000527733 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 74.6 ms