RNA–Protein interactions for RNA: ENST00000527424.5

RNF170-206, Transcript of ring finger protein 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF170, Length 3,880 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-206ENST00000527424 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
RNF170-206ENST00000527424 FCGBPQ9Y6R7 5405 aaPredicted RBP4.23□□□□□ -1.73
RNF170-206ENST00000527424 SPRR2FQ96RM1 72 aa4.21□□□□□ -1.73
RNF170-206ENST00000527424 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
RNF170-206ENST00000527424 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
RNF170-206ENST00000527424 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
RNF170-206ENST00000527424 KRTAP2-1Q9BYU5 128 aa4.19□□□□□ -1.74
RNF170-206ENST00000527424 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
RNF170-206ENST00000527424 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
RNF170-206ENST00000527424 LCE3BQ5TA77 95 aa4.13□□□□□ -1.75
RNF170-206ENST00000527424 MUC12Q9UKN1 5478 aa4.12□□□□□ -1.75
RNF170-206ENST00000527424 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.75
RNF170-206ENST00000527424 MT1MQ8N339 61 aa4.07□□□□□ -1.76
RNF170-206ENST00000527424 SSPOA2VEC9 5147 aa4.06□□□□□ -1.76
RNF170-206ENST00000527424 KRTAP19-6Q3LI70 58 aa4.06□□□□□ -1.76
RNF170-206ENST00000527424 SYNE2Q8WXH0 6885 aaKnown RBP3.95□□□□□ -1.78
RNF170-206ENST00000527424 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
RNF170-206ENST00000527424 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.79
RNF170-206ENST00000527424 SPRR2EP22531 72 aa3.78□□□□□ -1.8
RNF170-206ENST00000527424 SPRR2BP35325 72 aa3.78□□□□□ -1.8
RNF170-206ENST00000527424 SPRR2AP35326 72 aa3.78□□□□□ -1.8
RNF170-206ENST00000527424 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
RNF170-206ENST00000527424 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
RNF170-206ENST00000527424 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
RNF170-206ENST00000527424 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
RNF170-206ENST00000527424 KRTAP4-6Q9BYQ5 205 aa3.68□□□□□ -1.82
RNF170-206ENST00000527424 PRM1P04553 51 aa3.68□□□□□ -1.82
RNF170-206ENST00000527424 MT1AP04731 61 aa3.65□□□□□ -1.83
RNF170-206ENST00000527424 KRTAP9-7A8MTY7 169 aa3.6□□□□□ -1.83
RNF170-206ENST00000527424 SPRR2DP22532 72 aa3.6□□□□□ -1.83
RNF170-206ENST00000527424 MDN1Q9NU22 5596 aa3.59□□□□□ -1.84
RNF170-206ENST00000527424 KRTAP9-2Q9BYQ4 174 aa3.58□□□□□ -1.84
RNF170-206ENST00000527424 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
RNF170-206ENST00000527424 MT3P25713 68 aa3.44□□□□□ -1.86
RNF170-206ENST00000527424 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
RNF170-206ENST00000527424 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
RNF170-206ENST00000527424 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.88
RNF170-206ENST00000527424 MT4P47944 62 aa3.31□□□□□ -1.88
RNF170-206ENST00000527424 KRTAP5-9P26371 169 aa3.28□□□□□ -1.88
RNF170-206ENST00000527424 KRTAP6-3Q3LI67 103 aa3.17□□□□□ -1.9
RNF170-206ENST00000527424 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.14□□□□□ -1.91
RNF170-206ENST00000527424 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
RNF170-206ENST00000527424 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
RNF170-206ENST00000527424 KRTAP9-6A0A140TA67 174 aa3.08□□□□□ -1.92
RNF170-206ENST00000527424 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
RNF170-206ENST00000527424 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
RNF170-206ENST00000527424 KRTAP9-9Q9BYP9 154 aa2.92□□□□□ -1.94
RNF170-206ENST00000527424 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
RNF170-206ENST00000527424 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
RNF170-206ENST00000527424 NEBP20929 6669 aa2.87□□□□□ -1.95
RNF170-206ENST00000527424 KRTAP4-11Q9BYQ6 195 aa2.81□□□□□ -1.96
RNF170-206ENST00000527424 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
RNF170-206ENST00000527424 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
RNF170-206ENST00000527424 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
RNF170-206ENST00000527424 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
RNF170-206ENST00000527424 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
RNF170-206ENST00000527424 MUC5ACP98088 5654 aa2.72□□□□□ -1.97
RNF170-206ENST00000527424 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
RNF170-206ENST00000527424 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
RNF170-206ENST00000527424 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
RNF170-206ENST00000527424 KRTAP5-2Q701N4 177 aa2.59□□□□□ -2
RNF170-206ENST00000527424 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
RNF170-206ENST00000527424 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
RNF170-206ENST00000527424 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
RNF170-206ENST00000527424 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
RNF170-206ENST00000527424 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
RNF170-206ENST00000527424 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
RNF170-206ENST00000527424 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
RNF170-206ENST00000527424 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
RNF170-206ENST00000527424 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
RNF170-206ENST00000527424 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
RNF170-206ENST00000527424 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
RNF170-206ENST00000527424 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
RNF170-206ENST00000527424 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
RNF170-206ENST00000527424 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
RNF170-206ENST00000527424 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
RNF170-206ENST00000527424 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 79.4 ms