RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 PCLOQ9Y6V0 5065 aa2.77□□□□□ -1.97
CTNND1-213ENST00000526357 LOC100996750A0A140TA64 210 aa2.77□□□□□ -1.97
CTNND1-213ENST00000526357 LCE5AQ5TCM9 118 aa2.75□□□□□ -1.97
CTNND1-213ENST00000526357 KRTAP19-2Q3LHN2 52 aa2.75□□□□□ -1.97
CTNND1-213ENST00000526357 LPAP08519 4548 aa2.74□□□□□ -1.97
CTNND1-213ENST00000526357 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
CTNND1-213ENST00000526357 MT1AP04731 61 aa2.72□□□□□ -1.97
CTNND1-213ENST00000526357 LRP2P98164 4655 aa2.71□□□□□ -1.98
CTNND1-213ENST00000526357 KMT2CQ8NEZ4 4911 aaKnown RBP2.7□□□□□ -1.98
CTNND1-213ENST00000526357 KRTAP4-3Q9BYR4 195 aa2.69□□□□□ -1.98
CTNND1-213ENST00000526357 FLGP20930 4061 aaPredicted RBP2.68□□□□□ -1.98
CTNND1-213ENST00000526357 KRTAP2-3P0C7H8 128 aa2.68□□□□□ -1.98
CTNND1-213ENST00000526357 KRTAP2-4Q9BYR9 128 aa2.68□□□□□ -1.98
CTNND1-213ENST00000526357 EPPK1P58107 5090 aaKnown RBP2.66□□□□□ -1.98
CTNND1-213ENST00000526357 KRTAP2-1Q9BYU5 128 aa2.64□□□□□ -1.99
CTNND1-213ENST00000526357 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.63□□□□□ -1.99
CTNND1-213ENST00000526357 ABCA13Q86UQ4 5058 aa2.62□□□□□ -1.99
CTNND1-213ENST00000526357 KRTAP6-3Q3LI67 103 aa2.61□□□□□ -1.99
CTNND1-213ENST00000526357 KRTAP4-9Q9BYQ8 210 aa2.6□□□□□ -1.99
CTNND1-213ENST00000526357 LCE1CQ5T751 118 aa2.58□□□□□ -2
CTNND1-213ENST00000526357 LCE1EQ5T753 118 aa2.58□□□□□ -2
CTNND1-213ENST00000526357 LCE1FQ5T754 118 aa2.58□□□□□ -2
CTNND1-213ENST00000526357 LCE1AQ5T7P2 110 aa2.58□□□□□ -2
CTNND1-213ENST00000526357 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
CTNND1-213ENST00000526357 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
CTNND1-213ENST00000526357 KRTAP2-2Q9BYT5 123 aa2.53□□□□□ -2
CTNND1-213ENST00000526357 KRTAP9-4Q9BYQ2 154 aa2.52□□□□□ -2.01
CTNND1-213ENST00000526357 LCE4AQ5TA78 99 aa2.51□□□□□ -2.01
CTNND1-213ENST00000526357 FAT4Q6V0I7 4981 aa2.49□□□□□ -2.01
CTNND1-213ENST00000526357 RNF213Q63HN8 5207 aa2.48□□□□□ -2.01
CTNND1-213ENST00000526357 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.01
CTNND1-213ENST00000526357 SYNE2Q8WXH0 6885 aaKnown RBP2.41□□□□□ -2.02
CTNND1-213ENST00000526357 HMCN2Q8NDA2 5059 aa2.4□□□□□ -2.03
CTNND1-213ENST00000526357 UBR4Q5T4S7 5183 aa2.39□□□□□ -2.03
CTNND1-213ENST00000526357 FSIP2Q5CZC0 6907 aa2.33□□□□□ -2.04
CTNND1-213ENST00000526357 KRTAP9-9Q9BYP9 154 aa2.29□□□□□ -2.04
CTNND1-213ENST00000526357 KRTAP9-6A8MVA2 160 aa2.28□□□□□ -2.04
CTNND1-213ENST00000526357 SYNE1Q8NF91 8797 aaKnown RBP2.25□□□□□ -2.05
CTNND1-213ENST00000526357 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
CTNND1-213ENST00000526357 MUC2Q02817 5179 aa2.21□□□□□ -2.05
CTNND1-213ENST00000526357 NEBP20929 6669 aa2.17□□□□□ -2.06
CTNND1-213ENST00000526357 KRTAP4-11Q9BYQ6 195 aa2.15□□□□□ -2.07
CTNND1-213ENST00000526357 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
CTNND1-213ENST00000526357 KRTAP20-2Q3LI61 65 aa2.08□□□□□ -2.08
CTNND1-213ENST00000526357 USH2AO75445 5202 aa2.05□□□□□ -2.08
CTNND1-213ENST00000526357 KRTAP5-9P26371 169 aa2.02□□□□□ -2.09
CTNND1-213ENST00000526357 MACF1Q9UPN3 7388 aaKnown RBP2.02□□□□□ -2.09
CTNND1-213ENST00000526357 SSPOA2VEC9 5147 aa1.97□□□□□ -2.09
CTNND1-213ENST00000526357 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
CTNND1-213ENST00000526357 KRTAP4-6Q9BYQ5 205 aa1.93□□□□□ -2.1
CTNND1-213ENST00000526357 KRTAP4-12Q9BQ66 201 aa1.91□□□□□ -2.1
CTNND1-213ENST00000526357 FCGBPQ9Y6R7 5405 aaPredicted RBP1.9□□□□□ -2.11
CTNND1-213ENST00000526357 KRTAP4-2Q9BYR5 136 aa1.89□□□□□ -2.11
CTNND1-213ENST00000526357 KMT2DO14686 5537 aa1.87□□□□□ -2.11
CTNND1-213ENST00000526357 KRTAP5-4Q6L8H1 288 aa1.85□□□□□ -2.11
CTNND1-213ENST00000526357 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
CTNND1-213ENST00000526357 KRTAP5-5Q701N2 237 aaPredicted RBP1.76□□□□□ -2.13
CTNND1-213ENST00000526357 MUC12Q9UKN1 5478 aa1.74□□□□□ -2.13
CTNND1-213ENST00000526357 KRTAP5-3Q6L8H2 238 aa1.72□□□□□ -2.13
CTNND1-213ENST00000526357 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
CTNND1-213ENST00000526357 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
CTNND1-213ENST00000526357 MDN1Q9NU22 5596 aa1.68□□□□□ -2.14
CTNND1-213ENST00000526357 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
CTNND1-213ENST00000526357 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
CTNND1-213ENST00000526357 KRTAP5-7Q6L8G8 165 aa1.49□□□□□ -2.17
CTNND1-213ENST00000526357 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
CTNND1-213ENST00000526357 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
CTNND1-213ENST00000526357 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
CTNND1-213ENST00000526357 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
CTNND1-213ENST00000526357 KRTAP5-2Q701N4 177 aa1.4□□□□□ -2.19
CTNND1-213ENST00000526357 KRTAP5-10Q6L8G5 202 aa1.39□□□□□ -2.19
CTNND1-213ENST00000526357 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
CTNND1-213ENST00000526357 KRTAP5-1Q6L8H4 278 aa1.24□□□□□ -2.21
CTNND1-213ENST00000526357 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
CTNND1-213ENST00000526357 KRTAP21-2Q3LI59 83 aa1.16□□□□□ -2.22
CTNND1-213ENST00000526357 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.13□□□□□ -2.23
CTNND1-213ENST00000526357 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 89 ms