RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 MT1HL1P0DM35 61 aa0.05□□□□□ -2.4
USP47-206ENST00000525367 KRTAP6-1Q3LI64 71 aa0.05□□□□□ -2.4
USP47-206ENST00000525367 EYSQ5T1H1 3165 aa0.05□□□□□ -2.4
USP47-206ENST00000525367 PKHD1L1Q86WI1 4243 aa0.05□□□□□ -2.4
USP47-206ENST00000525367 DNAH1Q9P2D7 4330 aa0.04□□□□□ -2.4
USP47-206ENST00000525367 CSMD2Q7Z408 3487 aa0.04□□□□□ -2.4
USP47-206ENST00000525367 CENPEQ02224 2701 aa0.04□□□□□ -2.4
USP47-206ENST00000525367 VPS13DQ5THJ4 4388 aa0.04□□□□□ -2.4
USP47-206ENST00000525367 CEP350Q5VT06 3117 aa0.04□□□□□ -2.4
USP47-206ENST00000525367 BOD1L1Q8NFC6 3051 aa0.03□□□□□ -2.4
USP47-206ENST00000525367 DNAH8Q96JB1 4490 aa0.03□□□□□ -2.4
USP47-206ENST00000525367 PCNTO95613 3336 aa0.03□□□□□ -2.4
USP47-206ENST00000525367 MT2AP02795 61 aa0.03□□□□□ -2.4
USP47-206ENST00000525367 MT1MQ8N339 61 aa0.03□□□□□ -2.4
USP47-206ENST00000525367 DNAH6Q9C0G6 4158 aa0.03□□□□□ -2.41
USP47-206ENST00000525367 DNAH7Q8WXX0 4024 aa0.03□□□□□ -2.41
USP47-206ENST00000525367 DCHS1Q96JQ0 3298 aa0.02□□□□□ -2.41
USP47-206ENST00000525367 MUC3AQ02505 3323 aa0.02□□□□□ -2.41
USP47-206ENST00000525367 CMYA5Q8N3K9 4069 aa0.02□□□□□ -2.41
USP47-206ENST00000525367 DMDP11532 3685 aa0.02□□□□□ -2.41
USP47-206ENST00000525367 MT1GP13640 62 aa0.02□□□□□ -2.41
USP47-206ENST00000525367 XIRP2A4UGR9 3374 aa0.02□□□□□ -2.41
USP47-206ENST00000525367 SMG1Q96Q15 3661 aaKnown RBP0.02□□□□□ -2.41
USP47-206ENST00000525367 WDFY4Q6ZS81 3184 aa0.02□□□□□ -2.41
USP47-206ENST00000525367 FAT3Q8TDW7 4589 aa0.01□□□□□ -2.41
USP47-206ENST00000525367 LOC400499M0QZD8 3231 aa0.01□□□□□ -2.41
USP47-206ENST00000525367 APOBP04114 4563 aaKnown RBP0.01□□□□□ -2.41
USP47-206ENST00000525367 VPS13CQ709C8 3753 aa0.01□□□□□ -2.41
USP47-206ENST00000525367 MT4P47944 62 aa0.01□□□□□ -2.41
USP47-206ENST00000525367 MUC2Q02817 5179 aa0□□□□□ -2.41
USP47-206ENST00000525367 PCLOQ9Y6V0 5065 aa0□□□□□ -2.41
USP47-206ENST00000525367 KMT2CQ8NEZ4 4911 aaKnown RBP-0.01□□□□□ -2.41
USP47-206ENST00000525367 HERC1Q15751 4861 aa-0.01□□□□□ -2.41
USP47-206ENST00000525367 KRTAP20-2Q3LI61 65 aa-0.01□□□□□ -2.41
USP47-206ENST00000525367 CFAP47Q6ZTR5 3102 aa-0.01□□□□□ -2.41
USP47-206ENST00000525367 MYO15AQ9UKN7 3530 aa-0.01□□□□□ -2.41
USP47-206ENST00000525367 USH2AO75445 5202 aa-0.02□□□□□ -2.41
USP47-206ENST00000525367 TRRAPQ9Y4A5 3859 aa-0.02□□□□□ -2.41
USP47-206ENST00000525367 PLECQ15149 4684 aaKnown RBP-0.02□□□□□ -2.41
USP47-206ENST00000525367 MT1BP07438 61 aa-0.03□□□□□ -2.41
USP47-206ENST00000525367 DNAH10Q8IVF4 4471 aa-0.03□□□□□ -2.41
USP47-206ENST00000525367 STARD9Q9P2P6 4700 aa-0.03□□□□□ -2.41
USP47-206ENST00000525367 DNAH17Q9UFH2 4485 aa-0.03□□□□□ -2.41
USP47-206ENST00000525367 EP400Q96L91 3159 aa-0.04□□□□□ -2.42
USP47-206ENST00000525367 UNC80Q8N2C7 3258 aa-0.04□□□□□ -2.42
USP47-206ENST00000525367 MUC12Q9UKN1 5478 aa-0.04□□□□□ -2.42
USP47-206ENST00000525367 MT1FP04733 61 aa-0.04□□□□□ -2.42
USP47-206ENST00000525367 SPEGQ15772 3267 aa-0.04□□□□□ -2.42
USP47-206ENST00000525367 MUC17Q685J3 4493 aa-0.05□□□□□ -2.42
USP47-206ENST00000525367 ASPMQ8IZT6 3477 aa-0.05□□□□□ -2.42
USP47-206ENST00000525367 DYNC1H1Q14204 4646 aaKnown RBP-0.05□□□□□ -2.42
USP47-206ENST00000525367 RYR1P21817 5038 aa-0.05□□□□□ -2.42
USP47-206ENST00000525367 GOLGB1Q14789 3259 aaKnown RBP-0.06□□□□□ -2.42
USP47-206ENST00000525367 UBR4Q5T4S7 5183 aa-0.06□□□□□ -2.42
USP47-206ENST00000525367 CENPFP49454 3210 aa-0.07□□□□□ -2.42
USP47-206ENST00000525367 USP34Q70CQ2 3546 aa-0.07□□□□□ -2.42
USP47-206ENST00000525367 BRCA2P51587 3418 aa-0.07□□□□□ -2.42
USP47-206ENST00000525367 VCANP13611 3396 aa-0.07□□□□□ -2.42
USP47-206ENST00000525367 WDFY3Q8IZQ1 3526 aa-0.08□□□□□ -2.42
USP47-206ENST00000525367 VPS13AQ96RL7 3174 aa-0.08□□□□□ -2.42
USP47-206ENST00000525367 UTRNP46939 3433 aa-0.09□□□□□ -2.42
USP47-206ENST00000525367 DNHD1Q96M86 4753 aa-0.11□□□□□ -2.43
USP47-206ENST00000525367 DNAH5Q8TE73 4624 aa-0.11□□□□□ -2.43
USP47-206ENST00000525367 NEBP20929 6669 aa-0.11□□□□□ -2.43
USP47-206ENST00000525367 HERC2O95714 4834 aa-0.11□□□□□ -2.43
USP47-206ENST00000525367 EPPK1P58107 5090 aaKnown RBP-0.12□□□□□ -2.43
USP47-206ENST00000525367 RNF213Q63HN8 5207 aa-0.12□□□□□ -2.43
USP47-206ENST00000525367 BIRC6Q9NR09 4857 aa-0.13□□□□□ -2.43
USP47-206ENST00000525367 CDH23Q9H251 3354 aa-0.13□□□□□ -2.43
USP47-206ENST00000525367 KRTAP19-2Q3LHN2 52 aa-0.14□□□□□ -2.43
USP47-206ENST00000525367 HYDINQ4G0P3 5121 aa-0.15□□□□□ -2.43
USP47-206ENST00000525367 RYR3Q15413 4870 aa-0.16□□□□□ -2.43
USP47-206ENST00000525367 DNAH14Q0VDD8 3507 aa-0.17□□□□□ -2.44
USP47-206ENST00000525367 KIAA1109Q2LD37 5005 aa-0.17□□□□□ -2.44
USP47-206ENST00000525367 RYR2Q92736 4967 aa-0.18□□□□□ -2.44
USP47-206ENST00000525367 KRTAP20-1Q3LI63 56 aa-0.2□□□□□ -2.44
USP47-206ENST00000525367 KRTAP19-6Q3LI70 58 aa-0.24□□□□□ -2.45
USP47-206ENST00000525367 ABCA13Q86UQ4 5058 aa-0.25□□□□□ -2.45
Retrieved 78 of 20,778 RNA–protein pairs in 47.7 ms