RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 BAALC-AS2P0C853 105 aa0.35□□□□□ -2.35
CD44-212ENST00000524922 UBL5Q9BZL1 73 aa0.35□□□□□ -2.35
CD44-212ENST00000524922 TAX1BP3O14907 124 aa0.34□□□□□ -2.36
CD44-212ENST00000524922 APOC3P02656 99 aa0.34□□□□□ -2.36
CD44-212ENST00000524922 SCGB1A1P11684 91 aa0.34□□□□□ -2.36
CD44-212ENST00000524922 HSD52Q0P140 79 aa0.34□□□□□ -2.36
CD44-212ENST00000524922 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.36
CD44-212ENST00000524922 ATP5EP2Q5VTU8 51 aa0.34□□□□□ -2.36
CD44-212ENST00000524922 ATOH7Q8N100 152 aa0.34□□□□□ -2.36
CD44-212ENST00000524922 PSMB2P49721 201 aa0.33□□□□□ -2.36
CD44-212ENST00000524922 KRTAP25-1Q3LHN0 102 aa0.33□□□□□ -2.36
CD44-212ENST00000524922 C14orf132Q9NPU4 83 aa0.33□□□□□ -2.36
CD44-212ENST00000524922 ACYP2P14621 99 aa0.32□□□□□ -2.36
CD44-212ENST00000524922 FXYD2P54710 66 aa0.32□□□□□ -2.36
CD44-212ENST00000524922 MP68P56378 58 aa0.32□□□□□ -2.36
CD44-212ENST00000524922 H0Y9P7 68 aa0.31□□□□□ -2.36
CD44-212ENST00000524922 SCGB1C2P0DMR2 95 aa0.31□□□□□ -2.36
CD44-212ENST00000524922 LINC00208Q96KT6 92 aa0.31□□□□□ -2.36
CD44-212ENST00000524922 SMIM26A0A096LP01 95 aa0.3□□□□□ -2.36
CD44-212ENST00000524922 A0A1B0GV72 72 aa0.3□□□□□ -2.36
CD44-212ENST00000524922 FAM240AA0A1B0GVK7 77 aa0.3□□□□□ -2.36
CD44-212ENST00000524922 H7BZZ5 65 aa0.29□□□□□ -2.36
CD44-212ENST00000524922 M0R143 59 aa0.29□□□□□ -2.36
CD44-212ENST00000524922 S100A2P29034 98 aa0.29□□□□□ -2.36
CD44-212ENST00000524922 SPATA45Q537H7 98 aa0.29□□□□□ -2.36
CD44-212ENST00000524922 UQCR10Q9UDW1 63 aa0.29□□□□□ -2.36
CD44-212ENST00000524922 SPCS1Q9Y6A9 102 aa0.29□□□□□ -2.36
CD44-212ENST00000524922 K7ERJ3 54 aa0.28□□□□□ -2.36
CD44-212ENST00000524922 SEC61GP60059 68 aa0.28□□□□□ -2.36
CD44-212ENST00000524922 C14orf144Q96I85 54 aa0.28□□□□□ -2.36
CD44-212ENST00000524922 A0A1B0GU33 70 aa0.27□□□□□ -2.37
CD44-212ENST00000524922 S100A1P23297 94 aa0.27□□□□□ -2.37
CD44-212ENST00000524922 PRR15LQ9BU68 103 aa0.27□□□□□ -2.37
CD44-212ENST00000524922 SERP1Q9Y6X1 66 aa0.27□□□□□ -2.37
CD44-212ENST00000524922 CHKB-CPT1BH3BT56 60 aa0.26□□□□□ -2.37
CD44-212ENST00000524922 S100A6P06703 90 aa0.26□□□□□ -2.37
CD44-212ENST00000524922 SMIM20Q8N5G0 67 aa0.26□□□□□ -2.37
CD44-212ENST00000524922 PYY3Q5JQD4 70 aa0.24□□□□□ -2.37
CD44-212ENST00000524922 LINC00643Q86TS7 51 aa0.24□□□□□ -2.37
CD44-212ENST00000524922 F8W1H4 67 aa0.23□□□□□ -2.37
CD44-212ENST00000524922 SPATA8Q6RVD6 105 aa0.22□□□□□ -2.37
CD44-212ENST00000524922 SERP2Q8N6R1 65 aa0.22□□□□□ -2.37
CD44-212ENST00000524922 HIST1H4AP62805 103 aaKnown RBP0.21□□□□□ -2.38
CD44-212ENST00000524922 A0A1B0GU69 56 aa0.2□□□□□ -2.38
CD44-212ENST00000524922 RPS28P62857 69 aaKnown RBP0.2□□□□□ -2.38
CD44-212ENST00000524922 GTF2H5Q6ZYL4 71 aa0.2□□□□□ -2.38
CD44-212ENST00000524922 K7ERS5 55 aa0.19□□□□□ -2.38
CD44-212ENST00000524922 LUZP6Q538Z0 58 aa0.19□□□□□ -2.38
CD44-212ENST00000524922 COA5Q86WW8 74 aa0.19□□□□□ -2.38
CD44-212ENST00000524922 UQCR11O14957 56 aa0.18□□□□□ -2.38
CD44-212ENST00000524922 SMIM6P0DI80 62 aa0.18□□□□□ -2.38
CD44-212ENST00000524922 ETDBQ3ZM63 59 aa0.18□□□□□ -2.38
CD44-212ENST00000524922 COL5A1-AS1Q5SY13 56 aa0.17□□□□□ -2.38
CD44-212ENST00000524922 J3QR89 54 aa0.15□□□□□ -2.39
CD44-212ENST00000524922 CDC42SE1Q9NRR8 79 aa0.15□□□□□ -2.39
CD44-212ENST00000524922 LINC01558Q9Y6Z2 57 aa0.15□□□□□ -2.39
CD44-212ENST00000524922 ATP5EP56381 51 aaPredicted RBP0.13□□□□□ -2.39
CD44-212ENST00000524922 Q1T7F1 81 aa0.13□□□□□ -2.39
CD44-212ENST00000524922 ROMO1P60602 79 aa0.12□□□□□ -2.39
CD44-212ENST00000524922 MIR22HGQ0VDD5 57 aa0.12□□□□□ -2.39
CD44-212ENST00000524922 SNURFQ9Y675 71 aa0.11□□□□□ -2.39
CD44-212ENST00000524922 V9GYY9 64 aa0.1□□□□□ -2.39
CD44-212ENST00000524922 PCP4L1A6NKN8 68 aa0.09□□□□□ -2.4
CD44-212ENST00000524922 COX7CP15954 63 aa0.09□□□□□ -2.4
CD44-212ENST00000524922 K7ERU9 68 aa0.06□□□□□ -2.4
CD44-212ENST00000524922 TMEM258P61165 79 aa0.04□□□□□ -2.4
CD44-212ENST00000524922 PSPHP1O15172 72 aa0.03□□□□□ -2.4
CD44-212ENST00000524922 CCDC179H3BU77 68 aa0.02□□□□□ -2.41
CD44-212ENST00000524922 A0A1B0GV90 55 aa0.01□□□□□ -2.41
CD44-212ENST00000524922 A6NED7 52 aa0.01□□□□□ -2.41
CD44-212ENST00000524922 PRM1P04553 51 aa0□□□□□ -2.41
CD44-212ENST00000524922 LOC105371267A0A1B0GV96 52 aa-0.01□□□□□ -2.41
CD44-212ENST00000524922 BRK1Q8WUW1 75 aa-0.02□□□□□ -2.41
CD44-212ENST00000524922 ANAPC13Q9BS18 74 aa-0.03□□□□□ -2.41
CD44-212ENST00000524922 PRO0628Q9UI54 55 aa-0.11□□□□□ -2.43
CD44-212ENST00000524922 INE1O15225 51 aa-0.13□□□□□ -2.43
CD44-212ENST00000524922 PMAIP1Q13794 54 aa-0.17□□□□□ -2.44
CD44-212ENST00000524922 KTN1-AS1Q86SY8 53 aa-0.19□□□□□ -2.44
Retrieved 78 of 20,778 RNA–protein pairs in 86.5 ms