RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 LRP2P98164 4655 aa1.57□□□□□ -2.16
LINCR-0001-203ENST00000524047 ABCA13Q86UQ4 5058 aa1.55□□□□□ -2.16
LINCR-0001-203ENST00000524047 BIRC6Q9NR09 4857 aa1.52□□□□□ -2.17
LINCR-0001-203ENST00000524047 HERC2O95714 4834 aa1.52□□□□□ -2.17
LINCR-0001-203ENST00000524047 A0A0D9SG42 100 aa1.52□□□□□ -2.17
LINCR-0001-203ENST00000524047 M0QZ58 72 aa1.51□□□□□ -2.17
LINCR-0001-203ENST00000524047 KRTAP12-1P59990 96 aa1.51□□□□□ -2.17
LINCR-0001-203ENST00000524047 KRTAP13-4Q3LI77 160 aa1.51□□□□□ -2.17
LINCR-0001-203ENST00000524047 KRTAP4-1Q9BYQ7 146 aa1.47□□□□□ -2.17
LINCR-0001-203ENST00000524047 HERC1Q15751 4861 aa1.46□□□□□ -2.18
LINCR-0001-203ENST00000524047 FLGP20930 4061 aaPredicted RBP1.46□□□□□ -2.18
LINCR-0001-203ENST00000524047 KRTAP19-2Q3LHN2 52 aa1.46□□□□□ -2.18
LINCR-0001-203ENST00000524047 KRTAP12-3P60328 96 aa1.45□□□□□ -2.18
LINCR-0001-203ENST00000524047 HMCN2Q8NDA2 5059 aa1.45□□□□□ -2.18
LINCR-0001-203ENST00000524047 PCLOQ9Y6V0 5065 aa1.45□□□□□ -2.18
LINCR-0001-203ENST00000524047 KRTAP12-4P60329 112 aa1.42□□□□□ -2.18
LINCR-0001-203ENST00000524047 MUC2Q02817 5179 aa1.4□□□□□ -2.19
LINCR-0001-203ENST00000524047 CRCT1Q9UGL9 99 aa1.39□□□□□ -2.19
LINCR-0001-203ENST00000524047 M0R2T5 61 aa1.37□□□□□ -2.19
LINCR-0001-203ENST00000524047 MT1HP80294 61 aa1.37□□□□□ -2.19
LINCR-0001-203ENST00000524047 FAT4Q6V0I7 4981 aa1.36□□□□□ -2.19
LINCR-0001-203ENST00000524047 SPRR2GQ9BYE4 73 aa1.36□□□□□ -2.19
LINCR-0001-203ENST00000524047 RNF213Q63HN8 5207 aa1.35□□□□□ -2.19
LINCR-0001-203ENST00000524047 TNP1P09430 55 aa1.34□□□□□ -2.19
LINCR-0001-203ENST00000524047 UBR4Q5T4S7 5183 aa1.33□□□□□ -2.2
LINCR-0001-203ENST00000524047 MT2AP02795 61 aa1.33□□□□□ -2.2
LINCR-0001-203ENST00000524047 MT1FP04733 61 aa1.32□□□□□ -2.2
LINCR-0001-203ENST00000524047 KRTAP19-8Q3LI54 63 aa1.31□□□□□ -2.2
LINCR-0001-203ENST00000524047 KRTAP6-3Q3LI67 103 aa1.31□□□□□ -2.2
LINCR-0001-203ENST00000524047 MT1BP07438 61 aa1.27□□□□□ -2.21
LINCR-0001-203ENST00000524047 MT1XP80297 61 aa1.25□□□□□ -2.21
LINCR-0001-203ENST00000524047 KRTAP8-1Q8IUC2 63 aa1.24□□□□□ -2.21
LINCR-0001-203ENST00000524047 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
LINCR-0001-203ENST00000524047 KRTAP19-5Q3LI72 72 aa1.15□□□□□ -2.23
LINCR-0001-203ENST00000524047 USH2AO75445 5202 aa1.15□□□□□ -2.23
LINCR-0001-203ENST00000524047 FCGBPQ9Y6R7 5405 aaPredicted RBP1.15□□□□□ -2.23
LINCR-0001-203ENST00000524047 KRTAP2-3P0C7H8 128 aa1.14□□□□□ -2.23
LINCR-0001-203ENST00000524047 KRTAP19-6Q3LI70 58 aa1.14□□□□□ -2.23
LINCR-0001-203ENST00000524047 KRTAP2-4Q9BYR9 128 aa1.14□□□□□ -2.23
LINCR-0001-203ENST00000524047 KRTAP2-1Q9BYU5 128 aa1.14□□□□□ -2.23
LINCR-0001-203ENST00000524047 SSPOA2VEC9 5147 aa1.14□□□□□ -2.23
LINCR-0001-203ENST00000524047 KMT2DO14686 5537 aa1.13□□□□□ -2.23
LINCR-0001-203ENST00000524047 KRTAP19-7Q3SYF9 63 aa1.11□□□□□ -2.23
LINCR-0001-203ENST00000524047 MT1EP04732 61 aa1.09□□□□□ -2.23
LINCR-0001-203ENST00000524047 MT1LQ93083 61 aa1.08□□□□□ -2.24
LINCR-0001-203ENST00000524047 FSIP2Q5CZC0 6907 aa1.07□□□□□ -2.24
LINCR-0001-203ENST00000524047 MACF1Q9UPN3 7388 aaKnown RBP1.06□□□□□ -2.24
LINCR-0001-203ENST00000524047 MT1GP13640 62 aa1.05□□□□□ -2.24
LINCR-0001-203ENST00000524047 KRTAP19-3Q7Z4W3 81 aa1.04□□□□□ -2.24
LINCR-0001-203ENST00000524047 MT1MQ8N339 61 aa1.02□□□□□ -2.25
LINCR-0001-203ENST00000524047 SPRR2FQ96RM1 72 aa1.01□□□□□ -2.25
LINCR-0001-203ENST00000524047 MUC12Q9UKN1 5478 aa0.99□□□□□ -2.25
LINCR-0001-203ENST00000524047 SYNE2Q8WXH0 6885 aaKnown RBP0.97□□□□□ -2.25
LINCR-0001-203ENST00000524047 DSTQ03001 7570 aaKnown RBP0.96□□□□□ -2.26
LINCR-0001-203ENST00000524047 SPRR2EP22531 72 aa0.94□□□□□ -2.26
LINCR-0001-203ENST00000524047 SPRR2BP35325 72 aa0.94□□□□□ -2.26
LINCR-0001-203ENST00000524047 SPRR2AP35326 72 aa0.94□□□□□ -2.26
LINCR-0001-203ENST00000524047 MT1AP04731 61 aa0.93□□□□□ -2.26
LINCR-0001-203ENST00000524047 PRM1P04553 51 aa0.92□□□□□ -2.26
LINCR-0001-203ENST00000524047 SYNE1Q8NF91 8797 aaKnown RBP0.92□□□□□ -2.26
LINCR-0001-203ENST00000524047 SPRR2DP22532 72 aa0.91□□□□□ -2.26
LINCR-0001-203ENST00000524047 NEBP20929 6669 aa0.91□□□□□ -2.26
LINCR-0001-203ENST00000524047 MDN1Q9NU22 5596 aa0.9□□□□□ -2.26
LINCR-0001-203ENST00000524047 KRTAP6-1Q3LI64 71 aa0.9□□□□□ -2.27
LINCR-0001-203ENST00000524047 KRTAP20-1Q3LI63 56 aa0.85□□□□□ -2.27
LINCR-0001-203ENST00000524047 KRTAP6-2Q3LI66 62 aa0.82□□□□□ -2.28
LINCR-0001-203ENST00000524047 KRTAP5-10Q6L8G5 202 aa0.8□□□□□ -2.28
LINCR-0001-203ENST00000524047 GPR98Q8WXG9 6306 aa0.79□□□□□ -2.28
LINCR-0001-203ENST00000524047 KRTAP20-2Q3LI61 65 aa0.78□□□□□ -2.28
LINCR-0001-203ENST00000524047 MT4P47944 62 aa0.77□□□□□ -2.29
LINCR-0001-203ENST00000524047 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
LINCR-0001-203ENST00000524047 AHNAK2Q8IVF2 5795 aa0.72□□□□□ -2.29
LINCR-0001-203ENST00000524047 MUC5ACP98088 5654 aa0.67□□□□□ -2.3
LINCR-0001-203ENST00000524047 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
LINCR-0001-203ENST00000524047 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
LINCR-0001-203ENST00000524047 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.31
LINCR-0001-203ENST00000524047 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 7.5 ms