RNA–Protein interactions for RNA: ENST00000523622.1

NPM1-211, Transcript of nucleophosmin 1, humanhuman

TSL 3

Gene NPM1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-211ENST00000523622 TENM1Q9UKZ4 2725 aa1.39□□□□□ -2.19
NPM1-211ENST00000523622 PCNTO95613 3336 aa1.39□□□□□ -2.19
NPM1-211ENST00000523622 MYO9AB2RTY4 2548 aa1.38□□□□□ -2.19
NPM1-211ENST00000523622 LRP1BQ9NZR2 4599 aa1.38□□□□□ -2.19
NPM1-211ENST00000523622 EYSQ5T1H1 3165 aa1.37□□□□□ -2.19
NPM1-211ENST00000523622 SPRR2AP35326 72 aa1.36□□□□□ -2.19
NPM1-211ENST00000523622 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
NPM1-211ENST00000523622 UNC80Q8N2C7 3258 aa1.35□□□□□ -2.19
NPM1-211ENST00000523622 HERC1Q15751 4861 aa1.33□□□□□ -2.2
NPM1-211ENST00000523622 STARD9Q9P2P6 4700 aa1.33□□□□□ -2.2
NPM1-211ENST00000523622 BRCA2P51587 3418 aa1.32□□□□□ -2.2
NPM1-211ENST00000523622 WDFY3Q8IZQ1 3526 aa1.31□□□□□ -2.2
NPM1-211ENST00000523622 SPRR2FQ96RM1 72 aa1.31□□□□□ -2.2
NPM1-211ENST00000523622 MUC19Q7Z5P9 8384 aa1.31□□□□□ -2.2
NPM1-211ENST00000523622 DNAH14Q0VDD8 3507 aa1.3□□□□□ -2.2
NPM1-211ENST00000523622 SPRR2EP22531 72 aa1.25□□□□□ -2.21
NPM1-211ENST00000523622 LRP2P98164 4655 aa1.21□□□□□ -2.22
NPM1-211ENST00000523622 MT1EP04732 61 aa1.19□□□□□ -2.22
NPM1-211ENST00000523622 HMCN1Q96RW7 5635 aa1.17□□□□□ -2.22
NPM1-211ENST00000523622 SPRR2GQ9BYE4 73 aa1.15□□□□□ -2.23
NPM1-211ENST00000523622 MT1LQ93083 61 aa1.13□□□□□ -2.23
NPM1-211ENST00000523622 MT1HP80294 61 aa1.08□□□□□ -2.24
NPM1-211ENST00000523622 HMCN2Q8NDA2 5059 aa1.08□□□□□ -2.24
NPM1-211ENST00000523622 CDH23Q9H251 3354 aa1.07□□□□□ -2.24
NPM1-211ENST00000523622 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
NPM1-211ENST00000523622 MT1XP80297 61 aa1.03□□□□□ -2.24
NPM1-211ENST00000523622 DNHD1Q96M86 4753 aa1.02□□□□□ -2.25
NPM1-211ENST00000523622 KRTAP19-8Q3LI54 63 aa0.97□□□□□ -2.25
NPM1-211ENST00000523622 KRTAP4-1Q9BYQ7 146 aa0.97□□□□□ -2.25
NPM1-211ENST00000523622 MDN1Q9NU22 5596 aa0.96□□□□□ -2.26
NPM1-211ENST00000523622 USH2AO75445 5202 aa0.93□□□□□ -2.26
NPM1-211ENST00000523622 FAT4Q6V0I7 4981 aa0.92□□□□□ -2.26
NPM1-211ENST00000523622 KRTAP5-10Q6L8G5 202 aa0.92□□□□□ -2.26
NPM1-211ENST00000523622 MUC2Q02817 5179 aa0.91□□□□□ -2.26
NPM1-211ENST00000523622 KMT2CQ8NEZ4 4911 aaKnown RBP0.91□□□□□ -2.26
NPM1-211ENST00000523622 KRTAP19-7Q3SYF9 63 aa0.9□□□□□ -2.27
NPM1-211ENST00000523622 MT1GP13640 62 aa0.89□□□□□ -2.27
NPM1-211ENST00000523622 HERC2O95714 4834 aa0.88□□□□□ -2.27
NPM1-211ENST00000523622 SSPOA2VEC9 5147 aa0.87□□□□□ -2.27
NPM1-211ENST00000523622 KRTAP19-2Q3LHN2 52 aa0.86□□□□□ -2.27
NPM1-211ENST00000523622 RYR1P21817 5038 aa0.84□□□□□ -2.28
NPM1-211ENST00000523622 KRTAP21-2Q3LI59 83 aa0.83□□□□□ -2.28
NPM1-211ENST00000523622 BIRC6Q9NR09 4857 aa0.83□□□□□ -2.28
NPM1-211ENST00000523622 PCLOQ9Y6V0 5065 aa0.82□□□□□ -2.28
NPM1-211ENST00000523622 MUC5ACP98088 5654 aa0.81□□□□□ -2.28
NPM1-211ENST00000523622 RYR3Q15413 4870 aa0.81□□□□□ -2.28
NPM1-211ENST00000523622 HYDINQ4G0P3 5121 aa0.81□□□□□ -2.28
NPM1-211ENST00000523622 MT1BP07438 61 aa0.8□□□□□ -2.28
NPM1-211ENST00000523622 KRTAP6-1Q3LI64 71 aa0.79□□□□□ -2.28
NPM1-211ENST00000523622 FCGBPQ9Y6R7 5405 aaPredicted RBP0.78□□□□□ -2.28
NPM1-211ENST00000523622 CRCT1Q9UGL9 99 aa0.76□□□□□ -2.29
NPM1-211ENST00000523622 MT2AP02795 61 aa0.73□□□□□ -2.29
NPM1-211ENST00000523622 MT1MQ8N339 61 aa0.72□□□□□ -2.29
NPM1-211ENST00000523622 UBR4Q5T4S7 5183 aa0.72□□□□□ -2.29
NPM1-211ENST00000523622 KMT2DO14686 5537 aa0.71□□□□□ -2.3
NPM1-211ENST00000523622 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
NPM1-211ENST00000523622 RNF213Q63HN8 5207 aa0.63□□□□□ -2.31
NPM1-211ENST00000523622 PHGR1C9JFL3 82 aa0.63□□□□□ -2.31
NPM1-211ENST00000523622 MT1FP04733 61 aa0.55□□□□□ -2.32
NPM1-211ENST00000523622 MT1HL1P0DM35 61 aa0.55□□□□□ -2.32
NPM1-211ENST00000523622 MUC12Q9UKN1 5478 aa0.55□□□□□ -2.32
NPM1-211ENST00000523622 AHNAK2Q8IVF2 5795 aa0.54□□□□□ -2.32
NPM1-211ENST00000523622 MUC5BQ9HC84 5762 aaPredicted RBP0.53□□□□□ -2.32
NPM1-211ENST00000523622 EPPK1P58107 5090 aaKnown RBP0.48□□□□□ -2.33
NPM1-211ENST00000523622 RYR2Q92736 4967 aa0.46□□□□□ -2.34
NPM1-211ENST00000523622 AHNAKQ09666 5890 aaKnown RBP0.4□□□□□ -2.35
NPM1-211ENST00000523622 KIAA1109Q2LD37 5005 aa0.4□□□□□ -2.35
NPM1-211ENST00000523622 ABCA13Q86UQ4 5058 aa0.34□□□□□ -2.35
NPM1-211ENST00000523622 GPR98Q8WXG9 6306 aa0.24□□□□□ -2.37
NPM1-211ENST00000523622 MT4P47944 62 aa0.2□□□□□ -2.38
NPM1-211ENST00000523622 KRTAP20-2Q3LI61 65 aa0.19□□□□□ -2.38
NPM1-211ENST00000523622 DSTQ03001 7570 aaKnown RBP0.19□□□□□ -2.38
NPM1-211ENST00000523622 SYNE2Q8WXH0 6885 aaKnown RBP0.11□□□□□ -2.39
NPM1-211ENST00000523622 FSIP2Q5CZC0 6907 aa0.08□□□□□ -2.4
NPM1-211ENST00000523622 MACF1Q9UPN3 7388 aaKnown RBP0.01□□□□□ -2.41
NPM1-211ENST00000523622 KRTAP19-6Q3LI70 58 aa-0.09□□□□□ -2.42
NPM1-211ENST00000523622 KRTAP20-1Q3LI63 56 aa-0.31□□□□□ -2.46
NPM1-211ENST00000523622 NEBP20929 6669 aa-0.33□□□□□ -2.46
Retrieved 78 of 20,778 RNA–protein pairs in 63.8 ms