RNA–Protein interactions for RNA: ENST00000523091.5

CHMP7-210, Transcript of charged multivesicular body protein 7, humanhuman

TSL 1 (best)

Gene CHMP7, Length 2,672 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-210ENST00000523091 FCGBPQ9Y6R7 5405 aaPredicted RBP5.12□□□□□ -1.59
CHMP7-210ENST00000523091 MUC12Q9UKN1 5478 aa5.06□□□□□ -1.6
CHMP7-210ENST00000523091 KRTAP2-3P0C7H8 128 aa5□□□□□ -1.61
CHMP7-210ENST00000523091 KRTAP2-4Q9BYR9 128 aa5□□□□□ -1.61
CHMP7-210ENST00000523091 KRTAP2-1Q9BYU5 128 aa5□□□□□ -1.61
CHMP7-210ENST00000523091 KRTAP9-1A8MXZ3 250 aaPredicted RBP5□□□□□ -1.61
CHMP7-210ENST00000523091 KRTAP9-2Q9BYQ4 174 aa5□□□□□ -1.61
CHMP7-210ENST00000523091 KRTAP19-4Q3LI73 84 aa4.97□□□□□ -1.61
CHMP7-210ENST00000523091 KRTAP4-3Q9BYR4 195 aa4.97□□□□□ -1.61
CHMP7-210ENST00000523091 KRTAP9-6A0A140TA67 174 aa4.97□□□□□ -1.61
CHMP7-210ENST00000523091 KRTAP4-12Q9BQ66 201 aa4.97□□□□□ -1.61
CHMP7-210ENST00000523091 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
CHMP7-210ENST00000523091 MT1MQ8N339 61 aa4.87□□□□□ -1.63
CHMP7-210ENST00000523091 MACF1Q9UPN3 7388 aaKnown RBP4.86□□□□□ -1.63
CHMP7-210ENST00000523091 MT1GP13640 62 aa4.85□□□□□ -1.63
CHMP7-210ENST00000523091 LCE3BQ5TA77 95 aa4.83□□□□□ -1.64
CHMP7-210ENST00000523091 SPRR2FQ96RM1 72 aa4.82□□□□□ -1.64
CHMP7-210ENST00000523091 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
CHMP7-210ENST00000523091 CRCT1Q9UGL9 99 aa4.78□□□□□ -1.64
CHMP7-210ENST00000523091 KRTAP9-9Q9BYP9 154 aa4.76□□□□□ -1.65
CHMP7-210ENST00000523091 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
CHMP7-210ENST00000523091 SYNE2Q8WXH0 6885 aaKnown RBP4.75□□□□□ -1.65
CHMP7-210ENST00000523091 LCE5AQ5TCM9 118 aa4.74□□□□□ -1.65
CHMP7-210ENST00000523091 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
CHMP7-210ENST00000523091 MDN1Q9NU22 5596 aa4.68□□□□□ -1.66
CHMP7-210ENST00000523091 KRTAP9-7A8MTY7 169 aa4.63□□□□□ -1.67
CHMP7-210ENST00000523091 KRTAP12-4P60329 112 aa4.53□□□□□ -1.68
CHMP7-210ENST00000523091 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
CHMP7-210ENST00000523091 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
CHMP7-210ENST00000523091 KRTAP5-9P26371 169 aa4.49□□□□□ -1.69
CHMP7-210ENST00000523091 SPRR2EP22531 72 aa4.42□□□□□ -1.7
CHMP7-210ENST00000523091 SPRR2BP35325 72 aa4.42□□□□□ -1.7
CHMP7-210ENST00000523091 SPRR2AP35326 72 aa4.42□□□□□ -1.7
CHMP7-210ENST00000523091 SYNE1Q8NF91 8797 aaKnown RBP4.42□□□□□ -1.7
CHMP7-210ENST00000523091 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
CHMP7-210ENST00000523091 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
CHMP7-210ENST00000523091 MT1AP04731 61 aa4.32□□□□□ -1.72
CHMP7-210ENST00000523091 KRTAP5-5Q701N2 237 aaPredicted RBP4.31□□□□□ -1.72
CHMP7-210ENST00000523091 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
CHMP7-210ENST00000523091 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
CHMP7-210ENST00000523091 SPRR2DP22532 72 aa4.23□□□□□ -1.73
CHMP7-210ENST00000523091 KRTAP6-3Q3LI67 103 aa4.18□□□□□ -1.74
CHMP7-210ENST00000523091 LCE3DQ9BYE3 92 aa4.1□□□□□ -1.75
CHMP7-210ENST00000523091 PRM1P04553 51 aa4.08□□□□□ -1.76
CHMP7-210ENST00000523091 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
CHMP7-210ENST00000523091 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
CHMP7-210ENST00000523091 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
CHMP7-210ENST00000523091 NEBP20929 6669 aa3.93□□□□□ -1.78
CHMP7-210ENST00000523091 MT3P25713 68 aa3.88□□□□□ -1.79
CHMP7-210ENST00000523091 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
CHMP7-210ENST00000523091 MT4P47944 62 aa3.77□□□□□ -1.81
CHMP7-210ENST00000523091 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
CHMP7-210ENST00000523091 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.83
CHMP7-210ENST00000523091 HMCN1Q96RW7 5635 aa3.62□□□□□ -1.83
CHMP7-210ENST00000523091 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
CHMP7-210ENST00000523091 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
CHMP7-210ENST00000523091 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
CHMP7-210ENST00000523091 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
CHMP7-210ENST00000523091 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
CHMP7-210ENST00000523091 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
CHMP7-210ENST00000523091 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
CHMP7-210ENST00000523091 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
CHMP7-210ENST00000523091 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
CHMP7-210ENST00000523091 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
CHMP7-210ENST00000523091 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
CHMP7-210ENST00000523091 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
CHMP7-210ENST00000523091 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
CHMP7-210ENST00000523091 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
CHMP7-210ENST00000523091 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
CHMP7-210ENST00000523091 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
CHMP7-210ENST00000523091 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
CHMP7-210ENST00000523091 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
CHMP7-210ENST00000523091 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
CHMP7-210ENST00000523091 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
CHMP7-210ENST00000523091 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
CHMP7-210ENST00000523091 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
CHMP7-210ENST00000523091 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
CHMP7-210ENST00000523091 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 120.6 ms