RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 UQCR10Q9UDW1 63 aa2.7□□□□□ -1.98
TRAPPC9-212ENST00000521944 ATOX1O00244 68 aa2.68□□□□□ -1.98
TRAPPC9-212ENST00000521944 PYY3Q5JQD4 70 aa2.68□□□□□ -1.98
TRAPPC9-212ENST00000521944 UQCRQO14949 82 aa2.67□□□□□ -1.98
TRAPPC9-212ENST00000521944 DMAC1Q96GE9 116 aa2.66□□□□□ -1.98
TRAPPC9-212ENST00000521944 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.99
TRAPPC9-212ENST00000521944 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
TRAPPC9-212ENST00000521944 LINC00208Q96KT6 92 aa2.63□□□□□ -1.99
TRAPPC9-212ENST00000521944 TAX1BP3O14907 124 aa2.6□□□□□ -1.99
TRAPPC9-212ENST00000521944 MT1AP04731 61 aa2.58□□□□□ -2
TRAPPC9-212ENST00000521944 KRTAP12-3P60328 96 aa2.58□□□□□ -2
TRAPPC9-212ENST00000521944 M0R143 59 aa2.56□□□□□ -2
TRAPPC9-212ENST00000521944 TRAV7A0A075B6U4 112 aa2.54□□□□□ -2
TRAPPC9-212ENST00000521944 KRTAP12-1P59990 96 aa2.49□□□□□ -2.01
TRAPPC9-212ENST00000521944 SPINT4Q6UDR6 99 aa2.49□□□□□ -2.01
TRAPPC9-212ENST00000521944 MP68P56378 58 aa2.46□□□□□ -2.02
TRAPPC9-212ENST00000521944 TNP1P09430 55 aa2.44□□□□□ -2.02
TRAPPC9-212ENST00000521944 SPTSSBQ8NFR3 76 aa2.44□□□□□ -2.02
TRAPPC9-212ENST00000521944 ACYP2P14621 99 aa2.43□□□□□ -2.02
TRAPPC9-212ENST00000521944 HIST1H4AP62805 103 aaKnown RBP2.43□□□□□ -2.02
TRAPPC9-212ENST00000521944 SPATA8Q6RVD6 105 aa2.43□□□□□ -2.02
TRAPPC9-212ENST00000521944 H3BPC8 53 aa2.37□□□□□ -2.03
TRAPPC9-212ENST00000521944 ATP5EP2Q5VTU8 51 aa2.34□□□□□ -2.03
TRAPPC9-212ENST00000521944 CHKB-CPT1BH3BT56 60 aa2.33□□□□□ -2.04
TRAPPC9-212ENST00000521944 ETDBQ3ZM63 59 aa2.31□□□□□ -2.04
TRAPPC9-212ENST00000521944 LOC105371267A0A1B0GV96 52 aa2.29□□□□□ -2.04
TRAPPC9-212ENST00000521944 KRTAP25-1Q3LHN0 102 aa2.27□□□□□ -2.05
TRAPPC9-212ENST00000521944 SMIM6P0DI80 62 aa2.25□□□□□ -2.05
TRAPPC9-212ENST00000521944 A0A1B0GU33 70 aa2.24□□□□□ -2.05
TRAPPC9-212ENST00000521944 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
TRAPPC9-212ENST00000521944 FAM240AA0A1B0GVK7 77 aa2.21□□□□□ -2.06
TRAPPC9-212ENST00000521944 PCP4L1A6NKN8 68 aa2.21□□□□□ -2.06
TRAPPC9-212ENST00000521944 F8W1H4 67 aa2.2□□□□□ -2.06
TRAPPC9-212ENST00000521944 LINC00643Q86TS7 51 aa2.18□□□□□ -2.06
TRAPPC9-212ENST00000521944 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
TRAPPC9-212ENST00000521944 SCGB1A1P11684 91 aa2.17□□□□□ -2.06
TRAPPC9-212ENST00000521944 SERP1Q9Y6X1 66 aa2.16□□□□□ -2.06
TRAPPC9-212ENST00000521944 SEC61GP60059 68 aa2.13□□□□□ -2.07
TRAPPC9-212ENST00000521944 SMIM26A0A096LP01 95 aa2.12□□□□□ -2.07
TRAPPC9-212ENST00000521944 COL5A1-AS1Q5SY13 56 aa2.11□□□□□ -2.07
TRAPPC9-212ENST00000521944 A0A1B0GV90 55 aa2.08□□□□□ -2.08
TRAPPC9-212ENST00000521944 GTF2H5Q6ZYL4 71 aa2.08□□□□□ -2.08
TRAPPC9-212ENST00000521944 SPANXA2-OT1Q8N9U9 137 aa2.05□□□□□ -2.08
TRAPPC9-212ENST00000521944 COA5Q86WW8 74 aa2.04□□□□□ -2.08
TRAPPC9-212ENST00000521944 SNURFQ9Y675 71 aa2.03□□□□□ -2.08
TRAPPC9-212ENST00000521944 J3QR89 54 aa1.96□□□□□ -2.1
TRAPPC9-212ENST00000521944 K7ERU9 68 aa1.96□□□□□ -2.1
TRAPPC9-212ENST00000521944 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
TRAPPC9-212ENST00000521944 SERP2Q8N6R1 65 aa1.96□□□□□ -2.1
TRAPPC9-212ENST00000521944 A0A1B0GU69 56 aa1.9□□□□□ -2.11
TRAPPC9-212ENST00000521944 SMIM20Q8N5G0 67 aa1.86□□□□□ -2.11
TRAPPC9-212ENST00000521944 H7BZZ5 65 aa1.83□□□□□ -2.12
TRAPPC9-212ENST00000521944 ANAPC13Q9BS18 74 aa1.8□□□□□ -2.12
TRAPPC9-212ENST00000521944 COX7CP15954 63 aa1.77□□□□□ -2.13
TRAPPC9-212ENST00000521944 PRR15LQ9BU68 103 aa1.76□□□□□ -2.13
TRAPPC9-212ENST00000521944 CCDC179H3BU77 68 aa1.75□□□□□ -2.13
TRAPPC9-212ENST00000521944 TMEM258P61165 79 aa1.7□□□□□ -2.14
TRAPPC9-212ENST00000521944 ATP5EP56381 51 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC9-212ENST00000521944 LUZP6Q538Z0 58 aa1.65□□□□□ -2.15
TRAPPC9-212ENST00000521944 RPS28P62857 69 aaKnown RBP1.63□□□□□ -2.15
TRAPPC9-212ENST00000521944 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
TRAPPC9-212ENST00000521944 UQCR11O14957 56 aa1.59□□□□□ -2.15
TRAPPC9-212ENST00000521944 LINC01558Q9Y6Z2 57 aa1.57□□□□□ -2.16
TRAPPC9-212ENST00000521944 V9GYY9 64 aa1.57□□□□□ -2.16
TRAPPC9-212ENST00000521944 Q1T7F1 81 aa1.56□□□□□ -2.16
TRAPPC9-212ENST00000521944 PSPHP1O15172 72 aa1.54□□□□□ -2.16
TRAPPC9-212ENST00000521944 MIR22HGQ0VDD5 57 aa1.52□□□□□ -2.17
TRAPPC9-212ENST00000521944 A6NED7 52 aa1.51□□□□□ -2.17
TRAPPC9-212ENST00000521944 K7ERS5 55 aa1.51□□□□□ -2.17
TRAPPC9-212ENST00000521944 BRK1Q8WUW1 75 aa1.49□□□□□ -2.17
TRAPPC9-212ENST00000521944 CDC42SE1Q9NRR8 79 aa1.47□□□□□ -2.17
TRAPPC9-212ENST00000521944 PRO0628Q9UI54 55 aa1.45□□□□□ -2.18
TRAPPC9-212ENST00000521944 PMAIP1Q13794 54 aa1.4□□□□□ -2.19
TRAPPC9-212ENST00000521944 ROMO1P60602 79 aa1.38□□□□□ -2.19
TRAPPC9-212ENST00000521944 KTN1-AS1Q86SY8 53 aa1.34□□□□□ -2.19
TRAPPC9-212ENST00000521944 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
TRAPPC9-212ENST00000521944 INE1O15225 51 aa0.87□□□□□ -2.27
TRAPPC9-212ENST00000521944 PRM1P04553 51 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 135 ms