RNA–Protein interactions for RNA: ENST00000520371.5

CCNC-209, Transcript of cyclin C, humanhuman

TSL 5 BASIC

Gene CCNC, Length 2,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-209ENST00000520371 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.51
CCNC-209ENST00000520371 KRTAP2-1Q9BYU5 128 aa5.65□□□□□ -1.51
CCNC-209ENST00000520371 MT1GP13640 62 aa5.39□□□□□ -1.55
CCNC-209ENST00000520371 KRTAP19-3Q7Z4W3 81 aa5.37□□□□□ -1.55
CCNC-209ENST00000520371 MT1MQ8N339 61 aa5.34□□□□□ -1.55
CCNC-209ENST00000520371 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
CCNC-209ENST00000520371 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
CCNC-209ENST00000520371 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.25□□□□□ -1.57
CCNC-209ENST00000520371 KRTAP9-2Q9BYQ4 174 aa5.23□□□□□ -1.57
CCNC-209ENST00000520371 KRTAP9-6A0A140TA67 174 aa5.22□□□□□ -1.57
CCNC-209ENST00000520371 FCGBPQ9Y6R7 5405 aaPredicted RBP5.19□□□□□ -1.58
CCNC-209ENST00000520371 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
CCNC-209ENST00000520371 SPRR2FQ96RM1 72 aa5.13□□□□□ -1.59
CCNC-209ENST00000520371 MUC12Q9UKN1 5478 aa5.12□□□□□ -1.59
CCNC-209ENST00000520371 CRCT1Q9UGL9 99 aa5.12□□□□□ -1.59
CCNC-209ENST00000520371 LCE3BQ5TA77 95 aa5.06□□□□□ -1.6
CCNC-209ENST00000520371 KRTAP12-4P60329 112 aa4.97□□□□□ -1.61
CCNC-209ENST00000520371 KRTAP9-9Q9BYP9 154 aa4.97□□□□□ -1.61
CCNC-209ENST00000520371 KRTAP9-4Q9BYQ2 154 aa4.97□□□□□ -1.61
CCNC-209ENST00000520371 MT1AP04731 61 aa4.88□□□□□ -1.63
CCNC-209ENST00000520371 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
CCNC-209ENST00000520371 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
CCNC-209ENST00000520371 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
CCNC-209ENST00000520371 KRTAP5-9P26371 169 aa4.81□□□□□ -1.64
CCNC-209ENST00000520371 KRTAP6-1Q3LI64 71 aa4.81□□□□□ -1.64
CCNC-209ENST00000520371 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
CCNC-209ENST00000520371 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
CCNC-209ENST00000520371 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
CCNC-209ENST00000520371 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
CCNC-209ENST00000520371 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
CCNC-209ENST00000520371 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
CCNC-209ENST00000520371 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
CCNC-209ENST00000520371 LCE3DQ9BYE3 92 aa4.69□□□□□ -1.66
CCNC-209ENST00000520371 SPRR2EP22531 72 aa4.68□□□□□ -1.66
CCNC-209ENST00000520371 SPRR2BP35325 72 aa4.68□□□□□ -1.66
CCNC-209ENST00000520371 SPRR2AP35326 72 aa4.68□□□□□ -1.66
CCNC-209ENST00000520371 MDN1Q9NU22 5596 aa4.67□□□□□ -1.66
CCNC-209ENST00000520371 SYNE2Q8WXH0 6885 aaKnown RBP4.67□□□□□ -1.66
CCNC-209ENST00000520371 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
CCNC-209ENST00000520371 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
CCNC-209ENST00000520371 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
CCNC-209ENST00000520371 SPRR2DP22532 72 aa4.49□□□□□ -1.69
CCNC-209ENST00000520371 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
CCNC-209ENST00000520371 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.7
CCNC-209ENST00000520371 MT3P25713 68 aa4.38□□□□□ -1.71
CCNC-209ENST00000520371 PRM1P04553 51 aa4.37□□□□□ -1.71
CCNC-209ENST00000520371 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
CCNC-209ENST00000520371 KRTAP5-4Q6L8H1 288 aa4.18□□□□□ -1.74
CCNC-209ENST00000520371 NEBP20929 6669 aa4.02□□□□□ -1.77
CCNC-209ENST00000520371 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
CCNC-209ENST00000520371 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
CCNC-209ENST00000520371 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
CCNC-209ENST00000520371 MT4P47944 62 aa3.89□□□□□ -1.79
CCNC-209ENST00000520371 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
CCNC-209ENST00000520371 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
CCNC-209ENST00000520371 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
CCNC-209ENST00000520371 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
CCNC-209ENST00000520371 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
CCNC-209ENST00000520371 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
CCNC-209ENST00000520371 KRTAP5-10Q6L8G5 202 aa3.4□□□□□ -1.87
CCNC-209ENST00000520371 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
CCNC-209ENST00000520371 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
CCNC-209ENST00000520371 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
CCNC-209ENST00000520371 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
CCNC-209ENST00000520371 KRTAP21-2Q3LI59 83 aa3.12□□□□□ -1.91
CCNC-209ENST00000520371 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
CCNC-209ENST00000520371 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
CCNC-209ENST00000520371 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
CCNC-209ENST00000520371 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
CCNC-209ENST00000520371 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
CCNC-209ENST00000520371 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
CCNC-209ENST00000520371 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
CCNC-209ENST00000520371 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
CCNC-209ENST00000520371 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
CCNC-209ENST00000520371 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
CCNC-209ENST00000520371 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
CCNC-209ENST00000520371 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 8.6 ms