RNA–Protein interactions for RNA: ENST00000519634.5

CTNNA1-217, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-217ENST00000519634 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
CTNNA1-217ENST00000519634 SPTSSBQ8NFR3 76 aa2.17□□□□□ -2.06
CTNNA1-217ENST00000519634 TRAV7A0A075B6U4 112 aa2.16□□□□□ -2.06
CTNNA1-217ENST00000519634 HIST1H4AP62805 103 aaKnown RBP2.16□□□□□ -2.06
CTNNA1-217ENST00000519634 MUC5ACP98088 5654 aa2.15□□□□□ -2.07
CTNNA1-217ENST00000519634 ATP5EP2Q5VTU8 51 aa2.14□□□□□ -2.07
CTNNA1-217ENST00000519634 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
CTNNA1-217ENST00000519634 KRTAP13-4Q3LI77 160 aa2.13□□□□□ -2.07
CTNNA1-217ENST00000519634 H3BPC8 53 aa2.12□□□□□ -2.07
CTNNA1-217ENST00000519634 ACYP2P14621 99 aa2.11□□□□□ -2.07
CTNNA1-217ENST00000519634 C10orf95Q9H7T3 257 aa2.11□□□□□ -2.07
CTNNA1-217ENST00000519634 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.07
CTNNA1-217ENST00000519634 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
CTNNA1-217ENST00000519634 PCP4L1A6NKN8 68 aa2.08□□□□□ -2.08
CTNNA1-217ENST00000519634 ETDBQ3ZM63 59 aa2.08□□□□□ -2.08
CTNNA1-217ENST00000519634 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
CTNNA1-217ENST00000519634 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
CTNNA1-217ENST00000519634 CHKB-CPT1BH3BT56 60 aa2.07□□□□□ -2.08
CTNNA1-217ENST00000519634 SMIM6P0DI80 62 aa2.07□□□□□ -2.08
CTNNA1-217ENST00000519634 F8W1H4 67 aa2.05□□□□□ -2.08
CTNNA1-217ENST00000519634 FAM240AA0A1B0GVK7 77 aa2.04□□□□□ -2.08
CTNNA1-217ENST00000519634 SPINT4Q6UDR6 99 aa2.04□□□□□ -2.08
CTNNA1-217ENST00000519634 GTF2H5Q6ZYL4 71 aa2.03□□□□□ -2.08
CTNNA1-217ENST00000519634 COL5A1-AS1Q5SY13 56 aa2.02□□□□□ -2.09
CTNNA1-217ENST00000519634 TNP1P09430 55 aa2.01□□□□□ -2.09
CTNNA1-217ENST00000519634 SEC61GP60059 68 aa2.01□□□□□ -2.09
CTNNA1-217ENST00000519634 KRTAP12-3P60328 96 aa2.01□□□□□ -2.09
CTNNA1-217ENST00000519634 LINC00643Q86TS7 51 aa2.01□□□□□ -2.09
CTNNA1-217ENST00000519634 KRTAP12-1P59990 96 aa1.99□□□□□ -2.09
CTNNA1-217ENST00000519634 SCGB1A1P11684 91 aa1.97□□□□□ -2.09
CTNNA1-217ENST00000519634 SPATA8Q6RVD6 105 aa1.97□□□□□ -2.09
CTNNA1-217ENST00000519634 SERP1Q9Y6X1 66 aa1.95□□□□□ -2.1
CTNNA1-217ENST00000519634 A0A1B0GU33 70 aa1.92□□□□□ -2.1
CTNNA1-217ENST00000519634 MT1AP04731 61 aa1.92□□□□□ -2.1
CTNNA1-217ENST00000519634 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
CTNNA1-217ENST00000519634 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
CTNNA1-217ENST00000519634 SMIM26A0A096LP01 95 aa1.88□□□□□ -2.11
CTNNA1-217ENST00000519634 SPANXA2-OT1Q8N9U9 137 aa1.87□□□□□ -2.11
CTNNA1-217ENST00000519634 SMIM20Q8N5G0 67 aa1.84□□□□□ -2.11
CTNNA1-217ENST00000519634 COA5Q86WW8 74 aa1.83□□□□□ -2.12
CTNNA1-217ENST00000519634 KRTAP25-1Q3LHN0 102 aa1.82□□□□□ -2.12
CTNNA1-217ENST00000519634 SNURFQ9Y675 71 aa1.82□□□□□ -2.12
CTNNA1-217ENST00000519634 LOC105371267A0A1B0GV96 52 aa1.79□□□□□ -2.12
CTNNA1-217ENST00000519634 SERP2Q8N6R1 65 aa1.78□□□□□ -2.12
CTNNA1-217ENST00000519634 A0A1B0GU69 56 aa1.75□□□□□ -2.13
CTNNA1-217ENST00000519634 J3QR89 54 aa1.74□□□□□ -2.13
CTNNA1-217ENST00000519634 PRR15LQ9BU68 103 aa1.67□□□□□ -2.14
CTNNA1-217ENST00000519634 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
CTNNA1-217ENST00000519634 H7BZZ5 65 aa1.65□□□□□ -2.15
CTNNA1-217ENST00000519634 LUZP6Q538Z0 58 aa1.65□□□□□ -2.15
CTNNA1-217ENST00000519634 PSPHP1O15172 72 aa1.61□□□□□ -2.15
CTNNA1-217ENST00000519634 A0A1B0GV90 55 aa1.59□□□□□ -2.15
CTNNA1-217ENST00000519634 UQCR11O14957 56 aa1.55□□□□□ -2.16
CTNNA1-217ENST00000519634 K7ERS5 55 aa1.54□□□□□ -2.16
CTNNA1-217ENST00000519634 K7ERU9 68 aa1.51□□□□□ -2.17
CTNNA1-217ENST00000519634 COX7CP15954 63 aa1.51□□□□□ -2.17
CTNNA1-217ENST00000519634 RPS28P62857 69 aaKnown RBP1.51□□□□□ -2.17
CTNNA1-217ENST00000519634 LINC01558Q9Y6Z2 57 aa1.51□□□□□ -2.17
CTNNA1-217ENST00000519634 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
CTNNA1-217ENST00000519634 V9GYY9 64 aa1.49□□□□□ -2.17
CTNNA1-217ENST00000519634 MIR22HGQ0VDD5 57 aa1.48□□□□□ -2.17
CTNNA1-217ENST00000519634 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
CTNNA1-217ENST00000519634 PRO0628Q9UI54 55 aa1.44□□□□□ -2.18
CTNNA1-217ENST00000519634 CDC42SE1Q9NRR8 79 aa1.4□□□□□ -2.19
CTNNA1-217ENST00000519634 ATP5EP56381 51 aaPredicted RBP1.39□□□□□ -2.19
CTNNA1-217ENST00000519634 ROMO1P60602 79 aa1.35□□□□□ -2.19
CTNNA1-217ENST00000519634 Q1T7F1 81 aa1.35□□□□□ -2.19
CTNNA1-217ENST00000519634 ANAPC13Q9BS18 74 aa1.29□□□□□ -2.2
CTNNA1-217ENST00000519634 A6NED7 52 aa1.28□□□□□ -2.2
CTNNA1-217ENST00000519634 PMAIP1Q13794 54 aa1.27□□□□□ -2.21
CTNNA1-217ENST00000519634 CCDC179H3BU77 68 aa1.26□□□□□ -2.21
CTNNA1-217ENST00000519634 TMEM258P61165 79 aa1.21□□□□□ -2.22
CTNNA1-217ENST00000519634 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
CTNNA1-217ENST00000519634 KTN1-AS1Q86SY8 53 aa1.15□□□□□ -2.23
CTNNA1-217ENST00000519634 BRK1Q8WUW1 75 aa1.02□□□□□ -2.25
CTNNA1-217ENST00000519634 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
CTNNA1-217ENST00000519634 INE1O15225 51 aa0.85□□□□□ -2.27
CTNNA1-217ENST00000519634 PRM1P04553 51 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 83.2 ms