RNA–Protein interactions for RNA: ENST00000518069.1

PCDHGA5-201, Transcript of protocadherin gamma subfamily A, 5, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA5, Length 4,602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA5-201ENST00000518069 HMCN2Q8NDA2 5059 aa4.36□□□□□ -1.71
PCDHGA5-201ENST00000518069 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
PCDHGA5-201ENST00000518069 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
PCDHGA5-201ENST00000518069 LCE2AQ5TA79 106 aaPredicted RBP4.27□□□□□ -1.73
PCDHGA5-201ENST00000518069 MT1MQ8N339 61 aa4.25□□□□□ -1.73
PCDHGA5-201ENST00000518069 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
PCDHGA5-201ENST00000518069 KRTAP19-7Q3SYF9 63 aa4.18□□□□□ -1.74
PCDHGA5-201ENST00000518069 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
PCDHGA5-201ENST00000518069 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
PCDHGA5-201ENST00000518069 KRTAP9-2Q9BYQ4 174 aa4.14□□□□□ -1.75
PCDHGA5-201ENST00000518069 LCE2DQ5TA82 110 aaPredicted RBP4.07□□□□□ -1.76
PCDHGA5-201ENST00000518069 MT3P25713 68 aa4.03□□□□□ -1.76
PCDHGA5-201ENST00000518069 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
PCDHGA5-201ENST00000518069 MT4P47944 62 aa3.97□□□□□ -1.77
PCDHGA5-201ENST00000518069 MT1AP04731 61 aa3.92□□□□□ -1.78
PCDHGA5-201ENST00000518069 KRTAP2-3P0C7H8 128 aa3.91□□□□□ -1.78
PCDHGA5-201ENST00000518069 KRTAP2-4Q9BYR9 128 aa3.91□□□□□ -1.78
PCDHGA5-201ENST00000518069 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
PCDHGA5-201ENST00000518069 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
PCDHGA5-201ENST00000518069 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
PCDHGA5-201ENST00000518069 PRM1P04553 51 aa3.88□□□□□ -1.79
PCDHGA5-201ENST00000518069 SYNE2Q8WXH0 6885 aaKnown RBP3.88□□□□□ -1.79
PCDHGA5-201ENST00000518069 USH2AO75445 5202 aa3.86□□□□□ -1.79
PCDHGA5-201ENST00000518069 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
PCDHGA5-201ENST00000518069 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
PCDHGA5-201ENST00000518069 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
PCDHGA5-201ENST00000518069 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
PCDHGA5-201ENST00000518069 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
PCDHGA5-201ENST00000518069 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
PCDHGA5-201ENST00000518069 LCE1AQ5T7P2 110 aa3.77□□□□□ -1.81
PCDHGA5-201ENST00000518069 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
PCDHGA5-201ENST00000518069 KMT2DO14686 5537 aa3.71□□□□□ -1.82
PCDHGA5-201ENST00000518069 KRTAP6-3Q3LI67 103 aa3.68□□□□□ -1.82
PCDHGA5-201ENST00000518069 KRTAP9-7A8MTY7 169 aa3.65□□□□□ -1.82
PCDHGA5-201ENST00000518069 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
PCDHGA5-201ENST00000518069 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.61□□□□□ -1.83
PCDHGA5-201ENST00000518069 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
PCDHGA5-201ENST00000518069 KRTAP20-1Q3LI63 56 aa3.56□□□□□ -1.84
PCDHGA5-201ENST00000518069 MUC12Q9UKN1 5478 aa3.53□□□□□ -1.84
PCDHGA5-201ENST00000518069 MACF1Q9UPN3 7388 aaKnown RBP3.53□□□□□ -1.84
PCDHGA5-201ENST00000518069 SSPOA2VEC9 5147 aa3.48□□□□□ -1.85
PCDHGA5-201ENST00000518069 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
PCDHGA5-201ENST00000518069 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
PCDHGA5-201ENST00000518069 MDN1Q9NU22 5596 aa3.34□□□□□ -1.87
PCDHGA5-201ENST00000518069 KRTAP5-9P26371 169 aa3.3□□□□□ -1.88
PCDHGA5-201ENST00000518069 NEBP20929 6669 aa3.21□□□□□ -1.9
PCDHGA5-201ENST00000518069 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
PCDHGA5-201ENST00000518069 KRTAP4-6Q9BYQ5 205 aa3.12□□□□□ -1.91
PCDHGA5-201ENST00000518069 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
PCDHGA5-201ENST00000518069 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
PCDHGA5-201ENST00000518069 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
PCDHGA5-201ENST00000518069 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
PCDHGA5-201ENST00000518069 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
PCDHGA5-201ENST00000518069 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
PCDHGA5-201ENST00000518069 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
PCDHGA5-201ENST00000518069 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
PCDHGA5-201ENST00000518069 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
PCDHGA5-201ENST00000518069 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
PCDHGA5-201ENST00000518069 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
PCDHGA5-201ENST00000518069 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
PCDHGA5-201ENST00000518069 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
PCDHGA5-201ENST00000518069 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
PCDHGA5-201ENST00000518069 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
PCDHGA5-201ENST00000518069 KRTAP5-3Q6L8H2 238 aa2.48□□□□□ -2.01
PCDHGA5-201ENST00000518069 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
PCDHGA5-201ENST00000518069 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
PCDHGA5-201ENST00000518069 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
PCDHGA5-201ENST00000518069 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
PCDHGA5-201ENST00000518069 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
PCDHGA5-201ENST00000518069 KRTAP5-1Q6L8H4 278 aa2.06□□□□□ -2.08
PCDHGA5-201ENST00000518069 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
PCDHGA5-201ENST00000518069 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
PCDHGA5-201ENST00000518069 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
PCDHGA5-201ENST00000518069 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
PCDHGA5-201ENST00000518069 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
PCDHGA5-201ENST00000518069 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
PCDHGA5-201ENST00000518069 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 10.2 ms